| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15644750
GI number: 15644750
Start: 131053
End: 132249
Strand: Reverse
Name: Not Available
Synonym: HP0120
Alternate gene names: NA
Gene position: 132249-131053 (Counterclockwise)
Preceding gene: 15644751
Following gene: 15644749
Centisome position: 7.93
GC content: 34.75
Gene sequence:
>1197_bases ATGGAATCAGTAAAAACAGGAAAAACAAATAAGGTTGGCAAGAATACAGAGATGGCTAATACAAAGGCAAATAAAGAGAC TCATTTTAAACAAGTGAGCGCCATTACAAATATAATCAGATCAGTTGGTGGGTTTTTTACAAAAATTGCAAAGAGAGTTA GAGGACTTGTAAAAAAACACCCCAAGAAAAGCAGTGCGGCATTAGTAGTATTGACCCATATTGCGTGCAAGAAAGCGAAA GAATTAGACGATAAAGTCCAAGATAAATCCAAACAAGCTGAAAAAGAAAATCAAATCAATTGGTGGAAATATTCAGGATT AACAATAGCGGCAAGTTTATTATTAGCCGCTTGTAGCGCTGGTGATACTGATAAACAGATAGAACTAGAACAAGAAAAAA AGGAAGCTGAAAACGCTAGGGATAGAGCGAACAAGAGTGGGATAGAACTAGAACAAGAAAGACAGAAAACAAACAAGAGT GGGATAGAACTCGCTAATAGTCAAATAAAAGCAGAACAAGAAAGACAAAAGACAGAACAAGAAAAACAAAAAGCAAATAA GAGTGCGATAGAGTTAGAACAGCAAAAACAAAAGACCATTAATACACAAAGAGATTTGATTAAAGAACAGAAAGATTTCA TTAAAGAAACAGAACAAAATTGCCAAGAAAATCATAATCAATTCTTTATTAAAAAATTAGGAATTAAGGGTGGCATTGCT ATAGAAGTAGAAGCTGAATGCAAAACCCCTAAACCTGCAAAAACCAATCAAACCCCTATCCAGCCAAAACACCTCCCAAA CTCTAAACAACCTCATTCTCAAAGAGGATCAAAAGCGCAAGAGTTTATCGCTTATTTGCAAAAAGAGCTAGAATTTCTGC CCTATTCGCAAAAAGCTATCGCTAAACAAGTGAATTTCTATAAACCAAGTTCTATCGCTTATTTAGAACTAGATCCTAGA GATTTTAAGGTTACAGAAGAATGGCAAAAAGAAAATCTAAAAATACGCTCTAAAGCTCAAGCTAAAATGCTTGAAATGAG GGATTTAAAACCAGACCCACAAGCCCACCTTCCAACCTCTCAAAGCCTTTTGTTCGTTCAAAAAATATTTGCTGATGTTA ATAAAGAAATAGAAGCAGTTGCTAATACTGAAAAGAAAGCAGAAAAAGCGGGTTATGGTTATAGTAAAAGGATGTAG
Upstream 100 bases:
>100_bases TTGATAATAAATAAATCAATCTAACTTGAGTGGATTTTTCGTATTAGTTTCCATGATATRATTTTGWAAAGTAAGATTGT TTKTTAAARAAAGGTTGGTA
Downstream 100 bases:
>100_bases GCATAAGAAAATAAGAACACCATAAAATCGTTTTTAGCTTCTAGGAGACATCAGTCAGTTTCTTGCCATAGAAAAATCGC TTATTAGCTTGCTCCCTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MESVKTGKTNKVGKNTEMANTKANKETHFKQVSAITNIIRSVGGFFTKIAKRVRGLVKKHPKKSSAALVVLTHIACKKAK ELDDKVQDKSKQAEKENQINWWKYSGLTIAASLLLAACSAGDTDKQIELEQEKKEAENARDRANKSGIELEQERQKTNKS GIELANSQIKAEQERQKTEQEKQKANKSAIELEQQKQKTINTQRDLIKEQKDFIKETEQNCQENHNQFFIKKLGIKGGIA IEVEAECKTPKPAKTNQTPIQPKHLPNSKQPHSQRGSKAQEFIAYLQKELEFLPYSQKAIAKQVNFYKPSSIAYLELDPR DFKVTEEWQKENLKIRSKAQAKMLEMRDLKPDPQAHLPTSQSLLFVQKIFADVNKEIEAVANTEKKAEKAGYGYSKRM
Sequences:
>Translated_398_residues MESVKTGKTNKVGKNTEMANTKANKETHFKQVSAITNIIRSVGGFFTKIAKRVRGLVKKHPKKSSAALVVLTHIACKKAK ELDDKVQDKSKQAEKENQINWWKYSGLTIAASLLLAACSAGDTDKQIELEQEKKEAENARDRANKSGIELEQERQKTNKS GIELANSQIKAEQERQKTEQEKQKANKSAIELEQQKQKTINTQRDLIKEQKDFIKETEQNCQENHNQFFIKKLGIKGGIA IEVEAECKTPKPAKTNQTPIQPKHLPNSKQPHSQRGSKAQEFIAYLQKELEFLPYSQKAIAKQVNFYKPSSIAYLELDPR DFKVTEEWQKENLKIRSKAQAKMLEMRDLKPDPQAHLPTSQSLLFVQKIFADVNKEIEAVANTEKKAEKAGYGYSKRM >Mature_398_residues MESVKTGKTNKVGKNTEMANTKANKETHFKQVSAITNIIRSVGGFFTKIAKRVRGLVKKHPKKSSAALVVLTHIACKKAK ELDDKVQDKSKQAEKENQINWWKYSGLTIAASLLLAACSAGDTDKQIELEQEKKEAENARDRANKSGIELEQERQKTNKS GIELANSQIKAEQERQKTEQEKQKANKSAIELEQQKQKTINTQRDLIKEQKDFIKETEQNCQENHNQFFIKKLGIKGGIA IEVEAECKTPKPAKTNQTPIQPKHLPNSKQPHSQRGSKAQEFIAYLQKELEFLPYSQKAIAKQVNFYKPSSIAYLELDPR DFKVTEEWQKENLKIRSKAQAKMLEMRDLKPDPQAHLPTSQSLLFVQKIFADVNKEIEAVANTEKKAEKAGYGYSKRM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45264; Mature: 45264
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESVKTGKTNKVGKNTEMANTKANKETHFKQVSAITNIIRSVGGFFTKIAKRVRGLVKKH CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PKKSSAALVVLTHIACKKAKELDDKVQDKSKQAEKENQINWWKYSGLTIAASLLLAACSA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCC GDTDKQIELEQEKKEAENARDRANKSGIELEQERQKTNKSGIELANSQIKAEQERQKTEQ CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH EKQKANKSAIELEQQKQKTINTQRDLIKEQKDFIKETEQNCQENHNQFFIKKLGIKGGIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHCCCCCEE IEVEAECKTPKPAKTNQTPIQPKHLPNSKQPHSQRGSKAQEFIAYLQKELEFLPYSQKAI EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHCCCHHHHH AKQVNFYKPSSIAYLELDPRDFKVTEEWQKENLKIRSKAQAKMLEMRDLKPDPQAHLPTS HHHHCCCCCCCEEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC QSLLFVQKIFADVNKEIEAVANTEKKAEKAGYGYSKRM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC >Mature Secondary Structure MESVKTGKTNKVGKNTEMANTKANKETHFKQVSAITNIIRSVGGFFTKIAKRVRGLVKKH CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PKKSSAALVVLTHIACKKAKELDDKVQDKSKQAEKENQINWWKYSGLTIAASLLLAACSA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCC GDTDKQIELEQEKKEAENARDRANKSGIELEQERQKTNKSGIELANSQIKAEQERQKTEQ CCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH EKQKANKSAIELEQQKQKTINTQRDLIKEQKDFIKETEQNCQENHNQFFIKKLGIKGGIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHCCCCCEE IEVEAECKTPKPAKTNQTPIQPKHLPNSKQPHSQRGSKAQEFIAYLQKELEFLPYSQKAI EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHCCCHHHHH AKQVNFYKPSSIAYLELDPRDFKVTEEWQKENLKIRSKAQAKMLEMRDLKPDPQAHLPTS HHHHCCCCCCCEEEEEECCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC QSLLFVQKIFADVNKEIEAVANTEKKAEKAGYGYSKRM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA