| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15644744
GI number: 15644744
Start: 121002
End: 122888
Strand: Reverse
Name: Not Available
Synonym: HP0114
Alternate gene names: NA
Gene position: 122888-121002 (Counterclockwise)
Preceding gene: 15644745
Following gene: 15644741
Centisome position: 7.37
GC content: 37.04
Gene sequence:
>1887_bases ATGATGGATATTTATCAAAAAAACTTGCAAGCTCTTTTCAAAAAAGACCCTCTTTTGTTCGCAAAACTCAAAGCCATTAA AGAAAACAAAAAATACGAAGTGTTTTTAGGGAATGATAGTGCGAATTTCAACCTCTTAGATAAAGAAACAAACACGCCCT TATTTGAAAAAAGCCCTCTAGATTCAAGCTTAGAGTTATACAAAAATAGCGAAAATTACATGCTTTATCCTTATTTGTAT TATTTTGGCTTGGGTAATGGGGTGTTTTATCGCTTGCTTTTAGGTAATGAAAATTTAAAACGCTTGGTGGTCATTGAGCC TGAAATAGAGATTATTTTCATTGTGTTGAATCTTTTGGATTTTTCCACTGAGATTTTAGAAAATCGTTTGATTTTATTGC ATGCAAGTTTTTGCAATTACAACATGATCGCTTCATTATTTGATATGGATAAAAAGTCTCGTTTATACGCAAGAATGTAT GACTTAAAACTTTTTAACGCTTATTATGAACGATACTCTCATCAAATAATAGGAATCAACCAGCATTTCACGCGTGCTTT AGAGCATGGCGCTATTAGCGTAGGCAATGACGCTAAAGACGCGCTTATAGGCATCAAACAGCATGCCGCTAATTTGCCTG AAGTCATCAAAAGCCCTAGTTTAGTGGATTTTGTGAGCGCTTTAAAAAACAGAGACACCGCTATTATTGTTTCAACCGGG CCCAGTTTGAACAAGCAGCTCCCCCTTTTAAAAGAAATCGCTCCTTACGCCACGCTTTTTTGTATAGACGCTTCTTTCCC TATTTTGGCTAAAGCCGGTATCAAGCCTGATATTGTGCTGTCTTTAGAAAGGGTGGATTTAACGGCGAAATTTTATGAAG AAACCCCCTTAGATTTTCAAGAAGGCGTTATTTTTGCTCTGACTTCCATTGTGCATAAACGATTGATTCAAGCGATTAAA AGGGGGGTTAAACAATTCAGCTTCCGCCCCTTTGGTTATACCAACCTTTTTGATTTGCACCAGTATGGTTATGTGGGCAT AGGCATGAGCGCAGCGAACATGGCGTATGAATTAGTGGTGCATTCTCGTTTCAAAAGATGCGTGTTTATTGGGCAAGATT TGAGCTTTTCACAAAGCGGTAACAGCCATGCTAGTGGGGCGATCTATGGCGATAGAGAGATCAAGCCTAAAAAAGATAAA GACAAGATCTTTATAGAAAAATATGGGGGTAACGGGGAAGTAGAGACCACTTTAGTGTGGAAACTTTTCTTAGAATTTTT TGAAAAAGATATTTTTAACACGCCCTATAAACTAGAAGTCATCAACGCTACTGAAGGGGGGGCTAGGATTAAAGGGGCTA AAGAAATGCCTTTTAAAGAAGTGTGCGAAAAAATAGACAAATCCAAGCCAAAGCCTCCTATCAATCTCATTTATCCCACC CAATCAGAACAGGCTAAAAATTTAAAGATCGCTAGGCAAAAATGCGAAGAGATCATCAAATACGCCAATGAGAAAAAAAC TCAAGTTGAAGAAGTGTTTTTAAAGGTGGCAGAGTTTTTAGAAGAAGTGGAAAAGCTTCATGAAAAAAACAAATTAGAAG AGTTGGATTTTAACAAATTAGAAAATTTGAGCGCTGAAATTGATAACATTAAAGAGCTTTTTGATGACAAGCGATTCAAT TCGTATTTTATGGATGCGATACAATCTTACATCTTCCACCAGGAATTGCACATCGCTGAAATCGTGTGCAAGAAAACGAA TAATGAAGACGAATTAAGGGCTAAGCAATTAGAATACATTTACGTGCACAAATACTGGCTTTTTAGTTTGGCGGGTGGGA TTGATTGCGTGATAGAAGCGATCAAAATGGCTTTAAAAGAATGGTAA
Upstream 100 bases:
>100_bases CGAATGCGGTGCAACAAAATGTCTTAAGGCTTTTACAATAACAGCCCTTTTAATTCAAAGGGGCGTTAGCCCTTTTTATC AGTTATTTTTATAAGTTAGA
Downstream 100 bases:
>100_bases AACCCCTTTTTAAGCGTATGTGTCTAGGCTGGAATAAATTTCAGGGATATTTTCGCCACTAGCAAGGTTTTTCTCAACTT GGGATCTATCTTTAATCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: PseD Protein
Number of amino acids: Translated: 628; Mature: 628
Protein sequence:
>628_residues MMDIYQKNLQALFKKDPLLFAKLKAIKENKKYEVFLGNDSANFNLLDKETNTPLFEKSPLDSSLELYKNSENYMLYPYLY YFGLGNGVFYRLLLGNENLKRLVVIEPEIEIIFIVLNLLDFSTEILENRLILLHASFCNYNMIASLFDMDKKSRLYARMY DLKLFNAYYERYSHQIIGINQHFTRALEHGAISVGNDAKDALIGIKQHAANLPEVIKSPSLVDFVSALKNRDTAIIVSTG PSLNKQLPLLKEIAPYATLFCIDASFPILAKAGIKPDIVLSLERVDLTAKFYEETPLDFQEGVIFALTSIVHKRLIQAIK RGVKQFSFRPFGYTNLFDLHQYGYVGIGMSAANMAYELVVHSRFKRCVFIGQDLSFSQSGNSHASGAIYGDREIKPKKDK DKIFIEKYGGNGEVETTLVWKLFLEFFEKDIFNTPYKLEVINATEGGARIKGAKEMPFKEVCEKIDKSKPKPPINLIYPT QSEQAKNLKIARQKCEEIIKYANEKKTQVEEVFLKVAEFLEEVEKLHEKNKLEELDFNKLENLSAEIDNIKELFDDKRFN SYFMDAIQSYIFHQELHIAEIVCKKTNNEDELRAKQLEYIYVHKYWLFSLAGGIDCVIEAIKMALKEW
Sequences:
>Translated_628_residues MMDIYQKNLQALFKKDPLLFAKLKAIKENKKYEVFLGNDSANFNLLDKETNTPLFEKSPLDSSLELYKNSENYMLYPYLY YFGLGNGVFYRLLLGNENLKRLVVIEPEIEIIFIVLNLLDFSTEILENRLILLHASFCNYNMIASLFDMDKKSRLYARMY DLKLFNAYYERYSHQIIGINQHFTRALEHGAISVGNDAKDALIGIKQHAANLPEVIKSPSLVDFVSALKNRDTAIIVSTG PSLNKQLPLLKEIAPYATLFCIDASFPILAKAGIKPDIVLSLERVDLTAKFYEETPLDFQEGVIFALTSIVHKRLIQAIK RGVKQFSFRPFGYTNLFDLHQYGYVGIGMSAANMAYELVVHSRFKRCVFIGQDLSFSQSGNSHASGAIYGDREIKPKKDK DKIFIEKYGGNGEVETTLVWKLFLEFFEKDIFNTPYKLEVINATEGGARIKGAKEMPFKEVCEKIDKSKPKPPINLIYPT QSEQAKNLKIARQKCEEIIKYANEKKTQVEEVFLKVAEFLEEVEKLHEKNKLEELDFNKLENLSAEIDNIKELFDDKRFN SYFMDAIQSYIFHQELHIAEIVCKKTNNEDELRAKQLEYIYVHKYWLFSLAGGIDCVIEAIKMALKEW >Mature_628_residues MMDIYQKNLQALFKKDPLLFAKLKAIKENKKYEVFLGNDSANFNLLDKETNTPLFEKSPLDSSLELYKNSENYMLYPYLY YFGLGNGVFYRLLLGNENLKRLVVIEPEIEIIFIVLNLLDFSTEILENRLILLHASFCNYNMIASLFDMDKKSRLYARMY DLKLFNAYYERYSHQIIGINQHFTRALEHGAISVGNDAKDALIGIKQHAANLPEVIKSPSLVDFVSALKNRDTAIIVSTG PSLNKQLPLLKEIAPYATLFCIDASFPILAKAGIKPDIVLSLERVDLTAKFYEETPLDFQEGVIFALTSIVHKRLIQAIK RGVKQFSFRPFGYTNLFDLHQYGYVGIGMSAANMAYELVVHSRFKRCVFIGQDLSFSQSGNSHASGAIYGDREIKPKKDK DKIFIEKYGGNGEVETTLVWKLFLEFFEKDIFNTPYKLEVINATEGGARIKGAKEMPFKEVCEKIDKSKPKPPINLIYPT QSEQAKNLKIARQKCEEIIKYANEKKTQVEEVFLKVAEFLEEVEKLHEKNKLEELDFNKLENLSAEIDNIKELFDDKRFN SYFMDAIQSYIFHQELHIAEIVCKKTNNEDELRAKQLEYIYVHKYWLFSLAGGIDCVIEAIKMALKEW
Specific function: Unknown
COG id: COG2604
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72402; Mature: 72402
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMDIYQKNLQALFKKDPLLFAKLKAIKENKKYEVFLGNDSANFNLLDKETNTPLFEKSPL CCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCC DSSLELYKNSENYMLYPYLYYFGLGNGVFYRLLLGNENLKRLVVIEPEIEIIFIVLNLLD CCHHHHHCCCCCEEEEEEHHHHCCCCCCEEEEEECCCCCCEEEEECCCCEEHHHHHHHHH FSTEILENRLILLHASFCNYNMIASLFDMDKKSRLYARMYDLKLFNAYYERYSHQIIGIN HHHHHHHCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECH QHFTRALEHGAISVGNDAKDALIGIKQHAANLPEVIKSPSLVDFVSALKNRDTAIIVSTG HHHHHHHHCCCEECCCCCHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHCCCCCEEEEECC PSLNKQLPLLKEIAPYATLFCIDASFPILAKAGIKPDIVLSLERVDLTAKFYEETPLDFQ CCCCCCCCHHHHHCCHHEEEEECCCCCHHHHCCCCCCEEEEEEHHHHHHHHHHCCCCCHH EGVIFALTSIVHKRLIQAIKRGVKQFSFRPFGYTNLFDLHQYGYVGIGMSAANMAYELVV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCEEEECCHHHHHHHHHHH HSRFKRCVFIGQDLSFSQSGNSHASGAIYGDREIKPKKDKDKIFIEKYGGNGEVETTLVW HHHHHHEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHH KLFLEFFEKDIFNTPYKLEVINATEGGARIKGAKEMPFKEVCEKIDKSKPKPPINLIYPT HHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECC QSEQAKNLKIARQKCEEIIKYANEKKTQVEEVFLKVAEFLEEVEKLHEKNKLEELDFNKL CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHH ENLSAEIDNIKELFDDKRFNSYFMDAIQSYIFHQELHIAEIVCKKTNNEDELRAKQLEYI HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCEE YVHKYWLFSLAGGIDCVIEAIKMALKEW EEHHHHHHHHCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MMDIYQKNLQALFKKDPLLFAKLKAIKENKKYEVFLGNDSANFNLLDKETNTPLFEKSPL CCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCC DSSLELYKNSENYMLYPYLYYFGLGNGVFYRLLLGNENLKRLVVIEPEIEIIFIVLNLLD CCHHHHHCCCCCEEEEEEHHHHCCCCCCEEEEEECCCCCCEEEEECCCCEEHHHHHHHHH FSTEILENRLILLHASFCNYNMIASLFDMDKKSRLYARMYDLKLFNAYYERYSHQIIGIN HHHHHHHCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECH QHFTRALEHGAISVGNDAKDALIGIKQHAANLPEVIKSPSLVDFVSALKNRDTAIIVSTG HHHHHHHHCCCEECCCCCHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHCCCCCEEEEECC PSLNKQLPLLKEIAPYATLFCIDASFPILAKAGIKPDIVLSLERVDLTAKFYEETPLDFQ CCCCCCCCHHHHHCCHHEEEEECCCCCHHHHCCCCCCEEEEEEHHHHHHHHHHCCCCCHH EGVIFALTSIVHKRLIQAIKRGVKQFSFRPFGYTNLFDLHQYGYVGIGMSAANMAYELVV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCEEEECCHHHHHHHHHHH HSRFKRCVFIGQDLSFSQSGNSHASGAIYGDREIKPKKDKDKIFIEKYGGNGEVETTLVW HHHHHHEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEEEECCCCCCHHHHHH KLFLEFFEKDIFNTPYKLEVINATEGGARIKGAKEMPFKEVCEKIDKSKPKPPINLIYPT HHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEECC QSEQAKNLKIARQKCEEIIKYANEKKTQVEEVFLKVAEFLEEVEKLHEKNKLEELDFNKL CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHH ENLSAEIDNIKELFDDKRFNSYFMDAIQSYIFHQELHIAEIVCKKTNNEDELRAKQLEYI HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCEE YVHKYWLFSLAGGIDCVIEAIKMALKEW EEHHHHHHHHCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA