| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 15644741
GI number: 15644741
Start: 118823
End: 119653
Strand: Reverse
Name: Not Available
Synonym: HP0111
Alternate gene names: 15644741
Gene position: 119653-118823 (Counterclockwise)
Preceding gene: 15644744
Following gene: 15644740
Centisome position: 7.17
GC content: 38.51
Gene sequence:
>831_bases ATGGTGATTGACGAGATTTTTCAAATAATGATGTTAAGAAGAATTAAAGTAGGTTCTAATTTGAATAAAAAAGAGAGTTT GTTAGATGCGTTTGTTAAAACCTATCTGCAGATTTTAGAACCCATTAGTTCTAAACGCTTAAAAGAGTTGGCGGACTTGA AAATATCTTGCGCGACGATCAGGAATTATTTTCAAATCCTTTCTAAAGAGGGCATGCTTTATCAAGCCCATTCTAGTGGC GCTAGATTGCCCACTTTTAAGGCGTTTGAAAACTATTGGCAAAAGTCGTTGCGCTTTGAAACTTTAAAGGTGAATGAAAA ACGCCTAAAAAGCGCGAGTGAAAATTTTGGGCTTTTCACGCTGTTAAAAAAACCCAGTTTGGAGCGTTTAGAAAGAGTCA TTGAGTGCGAAAAACGCTTTTTGATTTTGGACTTTTTGGCGTTTTCTTGCGCACTGGGTTACAGCGTTAAAATGGAAAAG TTTTTATTAGAGCTTGTGGGCAGAAGCGTTAAAGAAGTGCGCTCAATCGCTGCTTCTTTCAATGCGTTGAGTTTGGCCAG GCAATTAGAGCGTTTGGAGTATTCCAACACACAAATCACACGCTTTAATCTGATGGGGTTAAAAACGCTTTTAAACAGCC CTTTATTTTTTGACATTTTAGGGGGTAAGGTTTTAGAGCGTTTGAGTAAGGGTTTGCATTTTATAGAGCCTGATTGCATG CTAGTAACACGCCCTGTAGAATTTCAAAACAAGCGGATGCAACTGCTTTGCGTGGGGAAACTAGAATGCGATTATGAAGG GTTTTTTCAAACGATTTCTGAGGAGGAATAA
Upstream 100 bases:
>100_bases TAAACTTTAAAGAAAAATCGGGTAATTTTTATCACTTTTTTAAAACAAGTGATAGATTATTAACTTTTTATGCTATAATG CGAGGGTTCTTTCATCAAGA
Downstream 100 bases:
>100_bases TGAAAGATGAACACAACCAAGAACACGATCATTTAAGCCAAAAAGAGCCAGAGTTTTGCGAAAAGGCTTGCAAAGAACAA CAATATGAAGAAAAGCAAGA
Product: heat-inducible transcription repressor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MVIDEIFQIMMLRRIKVGSNLNKKESLLDAFVKTYLQILEPISSKRLKELADLKISCATIRNYFQILSKEGMLYQAHSSG ARLPTFKAFENYWQKSLRFETLKVNEKRLKSASENFGLFTLLKKPSLERLERVIECEKRFLILDFLAFSCALGYSVKMEK FLLELVGRSVKEVRSIAASFNALSLARQLERLEYSNTQITRFNLMGLKTLLNSPLFFDILGGKVLERLSKGLHFIEPDCM LVTRPVEFQNKRMQLLCVGKLECDYEGFFQTISEEE
Sequences:
>Translated_276_residues MVIDEIFQIMMLRRIKVGSNLNKKESLLDAFVKTYLQILEPISSKRLKELADLKISCATIRNYFQILSKEGMLYQAHSSG ARLPTFKAFENYWQKSLRFETLKVNEKRLKSASENFGLFTLLKKPSLERLERVIECEKRFLILDFLAFSCALGYSVKMEK FLLELVGRSVKEVRSIAASFNALSLARQLERLEYSNTQITRFNLMGLKTLLNSPLFFDILGGKVLERLSKGLHFIEPDCM LVTRPVEFQNKRMQLLCVGKLECDYEGFFQTISEEE >Mature_276_residues MVIDEIFQIMMLRRIKVGSNLNKKESLLDAFVKTYLQILEPISSKRLKELADLKISCATIRNYFQILSKEGMLYQAHSSG ARLPTFKAFENYWQKSLRFETLKVNEKRLKSASENFGLFTLLKKPSLERLERVIECEKRFLILDFLAFSCALGYSVKMEK FLLELVGRSVKEVRSIAASFNALSLARQLERLEYSNTQITRFNLMGLKTLLNSPLFFDILGGKVLERLSKGLHFIEPDCM LVTRPVEFQNKRMQLLCVGKLECDYEGFFQTISEEE
Specific function: Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons [H]
COG id: COG1420
COG function: function code K; Transcriptional regulator of heat shock gene
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hrcA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002571 - InterPro: IPR011991 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32016; Mature: 32016
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIDEIFQIMMLRRIKVGSNLNKKESLLDAFVKTYLQILEPISSKRLKELADLKISCATI CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNYFQILSKEGMLYQAHSSGARLPTFKAFENYWQKSLRFETLKVNEKRLKSASENFGLFT HHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHEECCHHHHHHCCCCCCEEE LLKKPSLERLERVIECEKRFLILDFLAFSCALGYSVKMEKFLLELVGRSVKEVRSIAASF ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH NALSLARQLERLEYSNTQITRFNLMGLKTLLNSPLFFDILGGKVLERLSKGLHFIEPDCM HHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEECCCCE LVTRPVEFQNKRMQLLCVGKLECDYEGFFQTISEEE EEECCHHHCCCCEEEEEEECCCCCHHHHHHHHCCCC >Mature Secondary Structure MVIDEIFQIMMLRRIKVGSNLNKKESLLDAFVKTYLQILEPISSKRLKELADLKISCATI CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNYFQILSKEGMLYQAHSSGARLPTFKAFENYWQKSLRFETLKVNEKRLKSASENFGLFT HHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHEECCHHHHHHCCCCCCEEE LLKKPSLERLERVIECEKRFLILDFLAFSCALGYSVKMEKFLLELVGRSVKEVRSIAASF ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH NALSLARQLERLEYSNTQITRFNLMGLKTLLNSPLFFDILGGKVLERLSKGLHFIEPDCM HHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEECCCCE LVTRPVEFQNKRMQLLCVGKLECDYEGFFQTISEEE EEECCHHHCCCCEEEEEEECCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]