| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15644684
GI number: 15644684
Start: 52459
End: 53718
Strand: Reverse
Name: Not Available
Synonym: HP0053
Alternate gene names: NA
Gene position: 53718-52459 (Counterclockwise)
Preceding gene: 15644685
Following gene: 15644683
Centisome position: 3.22
GC content: 29.84
Gene sequence:
>1260_bases ATGAAAGAGCAATCAATGATTGATTTTTTAAAACTTAGAGATTATGACATTAGAAAAACACAAAATGCGCGATGGATAGA TCAAAAATGCACCCCTGATGTGTTGTCTCTTGTTGCTGATTGTATTTTAGAGTTTACGCAATGTAATATTGGAAAATCAT TTTCTATTAGGGATATTTGGGATAGCCCTTACACCAATGAAAATGTTAAAATGATTTTTTCTAAACCTGATTTAAATTCT GACTTTTCCATGCATGAATACGATAAGTTTTTTTCTCAGCCTATTAAATTATTAGCCTATAGCGGTATTTTATTTGAAAC AAAAACTGGCAATAGAAATATTTATACCATACAAAACATAGAGCTATTAGAATATCTCATGCAAAGAGAAACAAACGCTT TGAAATTCCTTATTTTATATATTCAAAAGGTATTAATGGATAGTGGGATTTATCCTTTATTTGACAACTTTTTACAAAAA CAAGACACAGAAAGTTTTAAGCAACTAAAAGATGGTTTCACTCATTTTACTATCAATAACACAGCAATCAATAACGCTAC GGAATGTTTTAGGATTTTTACTAAAATTATCAATCCTTTAGCTTTTTATTATGGTAAAAAAGGCACAAGAAAAGGGTATT TGTCCAACACTATAATTACAAAAGATGAGCTTAATTATAATCGTATCAATTGGCGAGATATAGGAAAAGATAAAAATACC ACCAGACAAGAATACGATCTTATAAACTCTAAAAGGATTGCTAATTCTAACTATCTTATTTCAAAAGCTAAGAAAGTGGT GAAACGATATAATGATAGATTTAATAATTCTCTCTCTGAAGTAAAACAAGAAAAAGAAGAGTCGCAAGCCACACAAATAC ACCATATTTTTCCCATCCAAGACTTTCCCATTATTGCTAACTATATAGAGAATCTTATCGCACTCACTCCTAATCAACAT TTTATTTACGCCCACCCTAATAATCAAACCCGCTTGATTGATAAAGATTTTCAATATATCTGCTTATTAGCTAAAACGAC CACAATTCTTAATGACACTCAAGGCGTATATGATTGGAATGATTATATTGTTGTGTTGAATATGGGCCTCAAAACAACTA TCTTTTCTCAAGTCAAGAACGAATGGGAATTATTAAAAGTAATAGATGCTTTTTATTTTGATTTTAACAAGAGCAAAGAT CCAAGTTGGTCATACTTGCTAGATAAAAACGATTTAAGAGCTTTCAAGCTAAAATTTTAA
Upstream 100 bases:
>100_bases AATTTAGAGATTTTTATAAAATCGCTAGGAATTATCAAACGCGCACCTTAAATATTGATAGCATGAGTTGTTTTTGGTTT GGAATTTTAAGGAGTAGCTT
Downstream 100 bases:
>100_bases TAAGTTTTATTGAAACTGGCTATAAAAACCCGCTTGACTTATCTTATCCTTTTCTTAAGCCATGCTTTGTTCATAGCATT CTAAAACCTTTAAACAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MKEQSMIDFLKLRDYDIRKTQNARWIDQKCTPDVLSLVADCILEFTQCNIGKSFSIRDIWDSPYTNENVKMIFSKPDLNS DFSMHEYDKFFSQPIKLLAYSGILFETKTGNRNIYTIQNIELLEYLMQRETNALKFLILYIQKVLMDSGIYPLFDNFLQK QDTESFKQLKDGFTHFTINNTAINNATECFRIFTKIINPLAFYYGKKGTRKGYLSNTIITKDELNYNRINWRDIGKDKNT TRQEYDLINSKRIANSNYLISKAKKVVKRYNDRFNNSLSEVKQEKEESQATQIHHIFPIQDFPIIANYIENLIALTPNQH FIYAHPNNQTRLIDKDFQYICLLAKTTTILNDTQGVYDWNDYIVVLNMGLKTTIFSQVKNEWELLKVIDAFYFDFNKSKD PSWSYLLDKNDLRAFKLKF
Sequences:
>Translated_419_residues MKEQSMIDFLKLRDYDIRKTQNARWIDQKCTPDVLSLVADCILEFTQCNIGKSFSIRDIWDSPYTNENVKMIFSKPDLNS DFSMHEYDKFFSQPIKLLAYSGILFETKTGNRNIYTIQNIELLEYLMQRETNALKFLILYIQKVLMDSGIYPLFDNFLQK QDTESFKQLKDGFTHFTINNTAINNATECFRIFTKIINPLAFYYGKKGTRKGYLSNTIITKDELNYNRINWRDIGKDKNT TRQEYDLINSKRIANSNYLISKAKKVVKRYNDRFNNSLSEVKQEKEESQATQIHHIFPIQDFPIIANYIENLIALTPNQH FIYAHPNNQTRLIDKDFQYICLLAKTTTILNDTQGVYDWNDYIVVLNMGLKTTIFSQVKNEWELLKVIDAFYFDFNKSKD PSWSYLLDKNDLRAFKLKF >Mature_419_residues MKEQSMIDFLKLRDYDIRKTQNARWIDQKCTPDVLSLVADCILEFTQCNIGKSFSIRDIWDSPYTNENVKMIFSKPDLNS DFSMHEYDKFFSQPIKLLAYSGILFETKTGNRNIYTIQNIELLEYLMQRETNALKFLILYIQKVLMDSGIYPLFDNFLQK QDTESFKQLKDGFTHFTINNTAINNATECFRIFTKIINPLAFYYGKKGTRKGYLSNTIITKDELNYNRINWRDIGKDKNT TRQEYDLINSKRIANSNYLISKAKKVVKRYNDRFNNSLSEVKQEKEESQATQIHHIFPIQDFPIIANYIENLIALTPNQH FIYAHPNNQTRLIDKDFQYICLLAKTTTILNDTQGVYDWNDYIVVLNMGLKTTIFSQVKNEWELLKVIDAFYFDFNKSKD PSWSYLLDKNDLRAFKLKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49557; Mature: 49557
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEQSMIDFLKLRDYDIRKTQNARWIDQKCTPDVLSLVADCILEFTQCNIGKSFSIRDIW CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECC DSPYTNENVKMIFSKPDLNSDFSMHEYDKFFSQPIKLLAYSGILFETKTGNRNIYTIQNI CCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEECCH ELLEYLMQRETNALKFLILYIQKVLMDSGIYPLFDNFLQKQDTESFKQLKDGFTHFTINN HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCCEEEEECC TAINNATECFRIFTKIINPLAFYYGKKGTRKGYLSNTIITKDELNYNRINWRDIGKDKNT CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCHHCCCCCCCC TRQEYDLINSKRIANSNYLISKAKKVVKRYNDRFNNSLSEVKQEKEESQATQIHHIFPIQ CHHHHHHHHCHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEECCC DFPIIANYIENLIALTPNQHFIYAHPNNQTRLIDKDFQYICLLAKTTTILNDTQGVYDWN CCHHHHHHHHHHHEECCCCEEEEECCCCCCEEECCCCEEEEEEEHHHHHHCCCCCCEECC DYIVVLNMGLKTTIFSQVKNEWELLKVIDAFYFDFNKSKDPSWSYLLDKNDLRAFKLKF CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEECC >Mature Secondary Structure MKEQSMIDFLKLRDYDIRKTQNARWIDQKCTPDVLSLVADCILEFTQCNIGKSFSIRDIW CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECC DSPYTNENVKMIFSKPDLNSDFSMHEYDKFFSQPIKLLAYSGILFETKTGNRNIYTIQNI CCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCEEEEECCH ELLEYLMQRETNALKFLILYIQKVLMDSGIYPLFDNFLQKQDTESFKQLKDGFTHFTINN HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCCEEEEECC TAINNATECFRIFTKIINPLAFYYGKKGTRKGYLSNTIITKDELNYNRINWRDIGKDKNT CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCHHCCCCCCCC TRQEYDLINSKRIANSNYLISKAKKVVKRYNDRFNNSLSEVKQEKEESQATQIHHIFPIQ CHHHHHHHHCHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEECCC DFPIIANYIENLIALTPNQHFIYAHPNNQTRLIDKDFQYICLLAKTTTILNDTQGVYDWN CCHHHHHHHHHHHEECCCCEEEEECCCCCCEEECCCCEEEEEEEHHHHHHCCCCCCEECC DYIVVLNMGLKTTIFSQVKNEWELLKVIDAFYFDFNKSKDPSWSYLLDKNDLRAFKLKF CEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA