| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15644683
GI number: 15644683
Start: 51272
End: 52264
Strand: Reverse
Name: Not Available
Synonym: HP0052
Alternate gene names: NA
Gene position: 52264-51272 (Counterclockwise)
Preceding gene: 15644684
Following gene: 15644682
Centisome position: 3.13
GC content: 34.74
Gene sequence:
>993_bases GTGTTGTTGAGCCGTTTCCAAATTAAAAATGGTTGTATTTATGGGGTGTGTTCTTATAAGGCTTCAAAATCTGTCTATGG CTATGAAGAAAGCAAAGCACAGGTTTTAAACGCTCTCAATACTTTAAGCGTGCATCCAATTTGGCAATCCAATCAAGAAA GCGTTACAAAAATCAAAGGAACTTTTGTTTTCATTTTAGAAAACGACTTGCATTTAGACGAAAACTCTTTTTACAAGAAA CTTTTAAACTCGCTCATAGACAACGATTTTTTTAACCGCTCCCATTCAATGACCCCCAATCAAAAACGCTTTTTGAGCGG CTTTTTTGAAAGCAGGGGCAGCATTGATACGCAACGAAATTTTTTGACTTTAGATTACTTCTTTCATAGCCCTTTAGAGT TTAAAAAGTTCCATTATTTAATTGATTTTTTCAATATCCCTAGCGAAGCGCTGAATTTCAATTTCAGGGAATTACAGCCT GAATACGCGCAAGGCATTAACCAACGAAACGCTCAATTCAGGATTTATTTAGATTGGTATTTACACCATATCGGTCTGTT TAACCCTTATAAAGCGCGAATCGCTGAACATGTTTTTAAAACCACTCTTGCTCATGATGGCATTTATTATAAATTAAACT ACCCGCCAACAACAAAGTATCATGGTAATAGCTTTACAGAATGCGCTCATTTTTATTTGAAAAACATTTATCAACAGGAT TTAGATGATAAAAGCATTGAAAAATTAAGGGAGCAGTTAGGCTTTATTCAAAAGAGCGAGGAGTTTAGACGAGATAGCAA AATCATCAATCTTTATCGCCTTTCAACGCCTAATGTTTGCAGTGCATGCTGCGATGATTACGACATTAAAGAAAGAAGTT TTCTTTCTTTACCTTTATATCAAATCACTCAAAATCCCGATTCCTACTACACTGAAATACATGATTTCTTTAGGCAAAAT CAGAGAATTAGATGTTTTAGCAAATCTTGCTAA
Upstream 100 bases:
>100_bases CAAAAACTAATGAGCGCTATCTTATAATCCTTTTAAAAAATAAAAGGTTATTGTTGCTTGTTTCTTGCTTTTTAACGCTA TTGACCCTTTTAATTTAGGG
Downstream 100 bases:
>100_bases ACTTTGCCCTACTTGTCATAGGGCTTTAAAAAAAGGATCTAGCGAAGAGGAGTTTCAAAAACGCTTGATTAGAAACATTC TCAATCGCAATAAAGACAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MLLSRFQIKNGCIYGVCSYKASKSVYGYEESKAQVLNALNTLSVHPIWQSNQESVTKIKGTFVFILENDLHLDENSFYKK LLNSLIDNDFFNRSHSMTPNQKRFLSGFFESRGSIDTQRNFLTLDYFFHSPLEFKKFHYLIDFFNIPSEALNFNFRELQP EYAQGINQRNAQFRIYLDWYLHHIGLFNPYKARIAEHVFKTTLAHDGIYYKLNYPPTTKYHGNSFTECAHFYLKNIYQQD LDDKSIEKLREQLGFIQKSEEFRRDSKIINLYRLSTPNVCSACCDDYDIKERSFLSLPLYQITQNPDSYYTEIHDFFRQN QRIRCFSKSC
Sequences:
>Translated_330_residues MLLSRFQIKNGCIYGVCSYKASKSVYGYEESKAQVLNALNTLSVHPIWQSNQESVTKIKGTFVFILENDLHLDENSFYKK LLNSLIDNDFFNRSHSMTPNQKRFLSGFFESRGSIDTQRNFLTLDYFFHSPLEFKKFHYLIDFFNIPSEALNFNFRELQP EYAQGINQRNAQFRIYLDWYLHHIGLFNPYKARIAEHVFKTTLAHDGIYYKLNYPPTTKYHGNSFTECAHFYLKNIYQQD LDDKSIEKLREQLGFIQKSEEFRRDSKIINLYRLSTPNVCSACCDDYDIKERSFLSLPLYQITQNPDSYYTEIHDFFRQN QRIRCFSKSC >Mature_330_residues MLLSRFQIKNGCIYGVCSYKASKSVYGYEESKAQVLNALNTLSVHPIWQSNQESVTKIKGTFVFILENDLHLDENSFYKK LLNSLIDNDFFNRSHSMTPNQKRFLSGFFESRGSIDTQRNFLTLDYFFHSPLEFKKFHYLIDFFNIPSEALNFNFRELQP EYAQGINQRNAQFRIYLDWYLHHIGLFNPYKARIAEHVFKTTLAHDGIYYKLNYPPTTKYHGNSFTECAHFYLKNIYQQD LDDKSIEKLREQLGFIQKSEEFRRDSKIINLYRLSTPNVCSACCDDYDIKERSFLSLPLYQITQNPDSYYTEIHDFFRQN QRIRCFSKSC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39246; Mature: 39246
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLSRFQIKNGCIYGVCSYKASKSVYGYEESKAQVLNALNTLSVHPIWQSNQESVTKIKG CCCCCEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCEECCCCCCCCHHHHEECC TFVFILENDLHLDENSFYKKLLNSLIDNDFFNRSHSMTPNQKRFLSGFFESRGSIDTQRN EEEEEEECCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCC FLTLDYFFHSPLEFKKFHYLIDFFNIPSEALNFNFRELQPEYAQGINQRNAQFRIYLDWY EEEEEEHHCCCHHHHHHHHHHHHHCCCHHHHCCCHHHCCCHHHCCCCCCCCEEEEEHHHH LHHIGLFNPYKARIAEHVFKTTLAHDGIYYKLNYPPTTKYHGNSFTECAHFYLKNIYQQD HHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHC LDDKSIEKLREQLGFIQKSEEFRRDSKIINLYRLSTPNVCSACCDDYDIKERSFLSLPLY CCHHHHHHHHHHHCHHHHHHHHHHHHHEEEEEECCCCCHHHHHCCCCCCCCCHHHCCCHH QITQNPDSYYTEIHDFFRQNQRIRCFSKSC HHHCCCHHHHHHHHHHHHCCCCEEEECCCC >Mature Secondary Structure MLLSRFQIKNGCIYGVCSYKASKSVYGYEESKAQVLNALNTLSVHPIWQSNQESVTKIKG CCCCCEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCEECCCCCCCCHHHHEECC TFVFILENDLHLDENSFYKKLLNSLIDNDFFNRSHSMTPNQKRFLSGFFESRGSIDTQRN EEEEEEECCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCC FLTLDYFFHSPLEFKKFHYLIDFFNIPSEALNFNFRELQPEYAQGINQRNAQFRIYLDWY EEEEEEHHCCCHHHHHHHHHHHHHCCCHHHHCCCHHHCCCHHHCCCCCCCCEEEEEHHHH LHHIGLFNPYKARIAEHVFKTTLAHDGIYYKLNYPPTTKYHGNSFTECAHFYLKNIYQQD HHHHCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHC LDDKSIEKLREQLGFIQKSEEFRRDSKIINLYRLSTPNVCSACCDDYDIKERSFLSLPLY CCHHHHHHHHHHHCHHHHHHHHHHHHHEEEEEECCCCCHHHHHCCCCCCCCCHHHCCCHH QITQNPDSYYTEIHDFFRQNQRIRCFSKSC HHHCCCHHHHHHHHHHHHCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA