| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15644654
GI number: 15644654
Start: 20569
End: 21141
Strand: Reverse
Name: Not Available
Synonym: HP0021
Alternate gene names: NA
Gene position: 21141-20569 (Counterclockwise)
Preceding gene: 15644655
Following gene: 15644644
Centisome position: 1.27
GC content: 44.68
Gene sequence:
>573_bases ATGAAAAAATTCTTATTTAAACAAAAATTTTGTGAAAGCCTGCCCAAAAGCTTTTCTAAAACTTTGTTAGCGCTCAGTTT GGGCTTGATTTTATTAGGCATTTTTGCGCCTTTCCCTAAAGTCCCTAAACAGCCTAGCGTGCCTTTAATGTTTCATTTCA CCGAGCATTATGCGCGCTTTATCCCTACGATTTTATCTGTGGCGATTCCCTTAATCCAAAGAGATGCGGTAGGGCTTTTT CAAGTCGCTAACGCTTCTATCGCTACAACCCTTCTCACGCACACCACCAAAAGAGCCTTAAACCATGTAACAATCAACGA TCAGCGTTTGGGCGAGCGCCCTTATGGAGGTAATTTCAACATGCCAAGCGGGCATTCGTCTATGGTGGGTTTGGCGGTGG CGTTTTTAATGCGCCGCTATTCTTTTAAAAAATACTTTTGGCTCTTGCCCCTAGTCCCTTTGACCATGCTCGCTCGCATT TATTTAGACATGCACACCATTGGCGCGGTGCTGACCGGGCTTGGCGTTGGAATGTTGTGCGTAAGCCTTTTTACAAGCCC CAAAAAGCCTTAA
Upstream 100 bases:
>100_bases CATAGCGTTTTAGGGGTGTTTTTGGATTTTAAAAACCCAAGCGTTGTTTATCGCCCTTCTTTAGATCTGCTTAAACACAA AAAAGAGTAAAATAACACGC
Downstream 100 bases:
>100_bases TCAAAAGCTTTAGTTTCTGTTTTTATAGTCTTCATAAGAAAAGTTTTTAAGGATTTTAAACCCTTGTTGATCCAATCTAG CCAGGCTTGGGAGCGGCACG
Product: lipid A 1-phosphatase
Products: NA
Alternate protein names: Membrane-Associated Phosphoesterase
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MKKFLFKQKFCESLPKSFSKTLLALSLGLILLGIFAPFPKVPKQPSVPLMFHFTEHYARFIPTILSVAIPLIQRDAVGLF QVANASIATTLLTHTTKRALNHVTINDQRLGERPYGGNFNMPSGHSSMVGLAVAFLMRRYSFKKYFWLLPLVPLTMLARI YLDMHTIGAVLTGLGVGMLCVSLFTSPKKP
Sequences:
>Translated_190_residues MKKFLFKQKFCESLPKSFSKTLLALSLGLILLGIFAPFPKVPKQPSVPLMFHFTEHYARFIPTILSVAIPLIQRDAVGLF QVANASIATTLLTHTTKRALNHVTINDQRLGERPYGGNFNMPSGHSSMVGLAVAFLMRRYSFKKYFWLLPLVPLTMLARI YLDMHTIGAVLTGLGVGMLCVSLFTSPKKP >Mature_190_residues MKKFLFKQKFCESLPKSFSKTLLALSLGLILLGIFAPFPKVPKQPSVPLMFHFTEHYARFIPTILSVAIPLIQRDAVGLF QVANASIATTLLTHTTKRALNHVTINDQRLGERPYGGNFNMPSGHSSMVGLAVAFLMRRYSFKKYFWLLPLVPLTMLARI YLDMHTIGAVLTGLGVGMLCVSLFTSPKKP
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21184; Mature: 21184
Theoretical pI: Translated: 10.93; Mature: 10.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFLFKQKFCESLPKSFSKTLLALSLGLILLGIFAPFPKVPKQPSVPLMFHFTEHYARF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHH IPTILSVAIPLIQRDAVGLFQVANASIATTLLTHTTKRALNHVTINDQRLGERPYGGNFN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCC MPSGHSSMVGLAVAFLMRRYSFKKYFWLLPLVPLTMLARIYLDMHTIGAVLTGLGVGMLC CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSLFTSPKKP HHHHHCCCCC >Mature Secondary Structure MKKFLFKQKFCESLPKSFSKTLLALSLGLILLGIFAPFPKVPKQPSVPLMFHFTEHYARF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHH IPTILSVAIPLIQRDAVGLFQVANASIATTLLTHTTKRALNHVTINDQRLGERPYGGNFN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCC MPSGHSSMVGLAVAFLMRRYSFKKYFWLLPLVPLTMLARIYLDMHTIGAVLTGLGVGMLC CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSLFTSPKKP HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA