| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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The map label for this gene is groES
Identifier: 15644644
GI number: 15644644
Start: 9268
End: 9624
Strand: Reverse
Name: groES
Synonym: HP0011
Alternate gene names: 15644644
Gene position: 9624-9268 (Counterclockwise)
Preceding gene: 15644654
Following gene: 15644643
Centisome position: 0.58
GC content: 41.74
Gene sequence:
>357_bases ATGAAGTTTCAGCCATTAGGAGAAAGGGTCTTAGTAGAAAGACTTGAAGAAGAGAACAAAACCAGTTCAGGCATCATCAT CCCTGATAACGCTAAGGAAAAGCCTTTAATGGGCGTAGTCAAAGCGGTTAGCCATAAAATCAGTGAGGGTTGCAAATGCG TTAAAGAAGGCGATGTGATCGCTTTTGGCAAATACAAAGGCGCAGAAATCGTTTTAGACGGCACTGAATACATGGTGCTA GAACTAGAAGACATTCTAGGCATTGTGGGCTCAGGCTCTTGTTGTCATACAGGTAATCATGACCATAAACATGCTAAAGA GCATGAAGCTTGCTGTCATGATCACAAAAAACACTAA
Upstream 100 bases:
>100_bases TATGGCTTGACTTATCCCTAAAAATGCGCTATAGTTATGTCGCTTAATAACAATAAGCGCTAAATTTCTATTTTATTTAT CAAAACTTAGGAGAACTAAT
Downstream 100 bases:
>100_bases AAACATTATTATTAAGGATACAAAATGGCAAAAGAAATCAAATTTTCAGATAGCGCGAGAAACCTTTTATTTGAAGGCGT GAGACAACTCCATGACGCTG
Product: co-chaperonin GroES
Products: NA
Alternate protein names: GroES protein; Protein Cpn10 [H]
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MKFQPLGERVLVERLEEENKTSSGIIIPDNAKEKPLMGVVKAVSHKISEGCKCVKEGDVIAFGKYKGAEIVLDGTEYMVL ELEDILGIVGSGSCCHTGNHDHKHAKEHEACCHDHKKH
Sequences:
>Translated_118_residues MKFQPLGERVLVERLEEENKTSSGIIIPDNAKEKPLMGVVKAVSHKISEGCKCVKEGDVIAFGKYKGAEIVLDGTEYMVL ELEDILGIVGSGSCCHTGNHDHKHAKEHEACCHDHKKH >Mature_118_residues MKFQPLGERVLVERLEEENKTSSGIIIPDNAKEKPLMGVVKAVSHKISEGCKCVKEGDVIAFGKYKGAEIVLDGTEYMVL ELEDILGIVGSGSCCHTGNHDHKHAKEHEACCHDHKKH
Specific function: Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter [H]
COG id: COG0234
COG function: function code O; Co-chaperonin GroES (HSP10)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GroES chaperonin family [H]
Homologues:
None
Paralogues:
None
Copy number: 980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 5720 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 1274 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020818 - InterPro: IPR018369 - InterPro: IPR011032 [H]
Pfam domain/function: PF00166 Cpn10 [H]
EC number: NA
Molecular weight: Translated: 12991; Mature: 12991
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: PS00681 CHAPERONINS_CPN10
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFQPLGERVLVERLEEENKTSSGIIIPDNAKEKPLMGVVKAVSHKISEGCKCVKEGDVI CCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEE AFGKYKGAEIVLDGTEYMVLELEDILGIVGSGSCCHTGNHDHKHAKEHEACCHDHKKH EEECCCCCEEEECCCCEEEEEHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MKFQPLGERVLVERLEEENKTSSGIIIPDNAKEKPLMGVVKAVSHKISEGCKCVKEGDVI CCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEE AFGKYKGAEIVLDGTEYMVLELEDILGIVGSGSCCHTGNHDHKHAKEHEACCHDHKKH EEECCCCCEEEECCCCEEEEEHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA