| Definition | Helicobacter pylori 26695, complete genome. |
|---|---|
| Accession | NC_000915 |
| Length | 1,667,867 |
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Identifier: 15644638
GI number: 15644638
Start: 1932
End: 2597
Strand: Reverse
Name: Not Available
Synonym: HP0004
Alternate gene names: 15644638
Gene position: 2597-1932 (Counterclockwise)
Preceding gene: 15646197
Following gene: 15644637
Centisome position: 0.16
GC content: 40.09
Gene sequence:
>666_bases GTGAAAGCGTTTTTAGGAGCGTTAGAGTTTCAAGAGAATGAATATGAAGAGCTTAAAGAGCTTTATGAGAGCTTAAAAAC CAAGCAAAAGCCCCACACTTTGTTCATTTCTTGTGTGGATTCACGAGTCGTGCCTAATTTAATCACTGGCACCAAACCGG GCGAATTGTATGTGATTTGCAACATGGGCAATGTGAACCCCCCTAAAACAAGCTATAAAGAGTCCCTTTCTACCATTGCG AGCATTGAATACGCTATCGCGCATGTGGGCGTTCAAAACTTAATCATTTGCGGGCATAGCGATTGTGGGGCTTGCGGGAG CGTTCATTTAATCCATGATGAAACCACCAAAGCTAAAACCCCTTACATTGCAAACTGGATACAATTTTTAGAGCCTGTTA AAGAAGAGTTAAAAAACCACCCGCAATTCAGCAACCATTTCGCCAAGCGTTCATGGCTTACAGAGCGTTTGAATGCGCGC TTGCAACTCAACAACCTCTTAAGCTATGATTTCATTCAAGAGAAAGCGAGCAAGAATGAATTAAAAATTTTTGGTTGGCA CTACATCATAGAAACAGGCAGGATTTATAATTATAATTTTGAAAGCCATTTTTTTGAGCCGATTGGAGAAACCATTAAAC AAAGGAAAAGTCATGAAAACTTCTAA
Upstream 100 bases:
>100_bases ATAACGCCATTATAACAAAAAGAAATGCAAGAATTTTAGCTATGATAAGCGTTTTAAAAACAAACGAATTTTAATCAAAA TGAGATTTAAGGGTTAAAGA
Downstream 100 bases:
>100_bases AACAAAAACCCCTAAATCCGTTTTAATCGCTGGGCCATGCGTCATTGAGAGCTTAGAAAATCTAAGAAGTATCGCCACTA AATTGCAACCCCTAGCCAAC
Product: carbonic anhydrase (icfA)
Products: NA
Alternate protein names: Carbonate dehydratase [H]
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MKAFLGALEFQENEYEELKELYESLKTKQKPHTLFISCVDSRVVPNLITGTKPGELYVICNMGNVNPPKTSYKESLSTIA SIEYAIAHVGVQNLIICGHSDCGACGSVHLIHDETTKAKTPYIANWIQFLEPVKEELKNHPQFSNHFAKRSWLTERLNAR LQLNNLLSYDFIQEKASKNELKIFGWHYIIETGRIYNYNFESHFFEPIGETIKQRKSHENF
Sequences:
>Translated_221_residues MKAFLGALEFQENEYEELKELYESLKTKQKPHTLFISCVDSRVVPNLITGTKPGELYVICNMGNVNPPKTSYKESLSTIA SIEYAIAHVGVQNLIICGHSDCGACGSVHLIHDETTKAKTPYIANWIQFLEPVKEELKNHPQFSNHFAKRSWLTERLNAR LQLNNLLSYDFIQEKASKNELKIFGWHYIIETGRIYNYNFESHFFEPIGETIKQRKSHENF >Mature_221_residues MKAFLGALEFQENEYEELKELYESLKTKQKPHTLFISCVDSRVVPNLITGTKPGELYVICNMGNVNPPKTSYKESLSTIA SIEYAIAHVGVQNLIICGHSDCGACGSVHLIHDETTKAKTPYIANWIQFLEPVKEELKNHPQFSNHFAKRSWLTERLNAR LQLNNLLSYDFIQEKASKNELKIFGWHYIIETGRIYNYNFESHFFEPIGETIKQRKSHENF
Specific function: Reversible Hydration Of Carbon Dioxide. Carbon Dioxide Formed In The Bicarbonate-Dependent Decomposition Of Cyanate By Cyanase (Cyns) Diffuses Out Of The Cell Faster Than It Would Be Hydrated To Bicarbonate, So The Apparent Function Of This Enzyme Is To C
COG id: COG0288
COG function: function code P; Carbonic anhydrase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the beta-class carbonic anhydrase family [H]
Homologues:
Organism=Escherichia coli, GI1786534, Length=205, Percent_Identity=33.1707317073171, Blast_Score=126, Evalue=1e-30, Organism=Escherichia coli, GI1786318, Length=208, Percent_Identity=27.8846153846154, Blast_Score=72, Evalue=2e-14, Organism=Caenorhabditis elegans, GI25147564, Length=238, Percent_Identity=24.3697478991597, Blast_Score=81, Evalue=3e-16, Organism=Caenorhabditis elegans, GI115532990, Length=113, Percent_Identity=30.0884955752212, Blast_Score=75, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6324292, Length=169, Percent_Identity=29.585798816568, Blast_Score=77, Evalue=2e-15, Organism=Drosophila melanogaster, GI24645213, Length=244, Percent_Identity=22.9508196721311, Blast_Score=88, Evalue=6e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001765 - InterPro: IPR015892 [H]
Pfam domain/function: PF00484 Pro_CA [H]
EC number: =4.2.1.1 [H]
Molecular weight: Translated: 25515; Mature: 25515
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: PS00705 PROK_CO2_ANHYDRASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAFLGALEFQENEYEELKELYESLKTKQKPHTLFISCVDSRVVPNLITGTKPGELYVIC CCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCHHCCHHHCCCCCCCEEEEE NMGNVNPPKTSYKESLSTIASIEYAIAHVGVQNLIICGHSDCGACGSVHLIHDETTKAKT ECCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHEEEECCCCCCCCCCEEEEECCCCCCCC PYIANWIQFLEPVKEELKNHPQFSNHFAKRSWLTERLNARLQLNNLLSYDFIQEKASKNE CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC LKIFGWHYIIETGRIYNYNFESHFFEPIGETIKQRKSHENF EEEEEEEEEEECCEEEEECHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKAFLGALEFQENEYEELKELYESLKTKQKPHTLFISCVDSRVVPNLITGTKPGELYVIC CCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCHHCCHHHCCCCCCCEEEEE NMGNVNPPKTSYKESLSTIASIEYAIAHVGVQNLIICGHSDCGACGSVHLIHDETTKAKT ECCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHEEEECCCCCCCCCCEEEEECCCCCCCC PYIANWIQFLEPVKEELKNHPQFSNHFAKRSWLTERLNARLQLNNLLSYDFIQEKASKNE CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC LKIFGWHYIIETGRIYNYNFESHFFEPIGETIKQRKSHENF EEEEEEEEEEECCEEEEECHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]