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The map label for this gene is omp1

Identifier: 15646197

GI number: 15646197

Start: 5241

End: 7145

Strand: Reverse

Name: omp1

Synonym: HP0009

Alternate gene names: NA

Gene position: 7145-5241 (Counterclockwise)

Preceding gene: 15644643

Following gene: 15644638

Centisome position: 0.43

GC content: 42.52

Gene sequence:

>1905_bases
ATGGTGAAAAACACCGGCGAATTGAAAAAACTTTCAGACACTTATGAGAATTTGAGCAACCTTTTAACCAATTTTAACAA
CCTCAATCAAGCGGTAACGAACGCGAGCAGCCCTTCAGAAATCAATGCCACGATCGATAATTTAAAAGCAAACACGCAAG
GGCTGATTGGCGAAAAAACCAATTCCCCGGCGTATCAAGCGGTGTATTTGGCGCTCAATGCGGCGGTGGGGCTGTGGAAT
GTGATAGCCTATAATGTCCAATGCGGTCCTGGTAAGAGTGGGGATCAAAGCGTAATTTTTGATGGCCAACCAGGACATGA
TTCAAGATCCATTAATTGCAATTTAACCGGTTATAACAACGGGGTTAGCGGCCCTTTATCCATTGACAATTTTAAAACGC
TTAATCAAGCTTATCAAACTATCCAACAAGCTTTAAAACAAGATAGCGGATTTCCTGTTTTGGATAGTAAAGGAAAACAA
GTAACTATAAAAATAACAACACAAACTAATGGAGCTAATAAAAGTGAAACTACTACTACTACTACTACTACTAATGACGC
TCAAACCCTTTTGCAAGAAGCCAGTAAAATGATAAGCGTCCTCACTACAAACTGCCCATGGGTAAATACCGCTCATAACT
CAAACGGGGGTGCACCGTGGAATTTAAATACGACAGGGAATGTGTGTCAGGTTTTTGCCACGGAGTTTAGCGCCGTTACT
AGCATGATCAAAAACGCGCAAGAAATCGTAACGCAAGCTCAAAGCCTTAACAACCCGCAAAGCAATCAAAACGCGCCGAA
AGATTTCAATCCTTACACCTCTGCTGATAGGGCTTTCGCTCAAAACATGCTCAATCACGCGCAAGCGCAAGCCAAGATGC
TTGAACTAGCCGATCAAATGAAAAAAGACCTTAACACTATCCCAAAACAATTTATCACAAACTACTTGGCAGCTTGCCGC
AATGGGGGTGGGACATTACCTGATGCAGGGGTTACTTCTAACACTTGGGGGGCCGGTTGCGCCTATGTGGAAGAGACGAT
AACCGCCCTAAATAACAGCCTTGCGCATTTTGGCACTCAAGCCGATCAAATCAAGCAATCTGAGTTGTTGGCGCGCACGA
TACTTGATTTTAGAGGCAGCCTTAAGGATTTAAACAACACTTATAACAGCATCACCACGACCGCTTCAAACACGCCCAAT
TCCCCATTCCTTAAAAATTTGATAAGCCAATCCACTAACCCTAATAACCCCGGGGGCTTACAGGCCGTTTATCAAGTCAA
CCAAAGCGCTTATTCGCAATTATTAAGCGCCACGCAAGAATTAGGGCATAACCCTTTCAGACGCGTTGGCTTAATCAGCT
CTCAAACCAACAACGGTGCGATGAATGGGATCGGCGTGCAAATAGGGTATAAACAATTTTTTGGTGAAAAAAGAAGATGG
GGGTTAAGGTATTATGGTTTTTTTGATTACAACCATGCTTATATCAAATCCAGCTTTTTCAACTCCGCCTCTGATGTGTT
CACTTATGGGGTAGGAACAGATGTCCTCTATAACTTTATCAACGATAAAGCCACCAAAAACAATAAGATTTCTTTTGGGG
TGTTTGGGGGGATTGCGTTAGCTGGCACTTCGTGGCTTAATTCTCAATACGTGAATTTAGCGACATTCAATAATTTTTAC
AGCGCTAAAATGAATGTGGCGAATTTCCAATTCTTATTCAACTTGGGCTTGAGAATGAATCTCGCTAAAAACAAAAAGAA
AGCGAGCGATCATGTAGCTCAGCATGGCGTGGAACTAGGCGTGAAGATCCCTACGATCAACACGAATTACTATTCTTTGC
TAGGCACTCAACTCCAATACCGCAGGCTTTATAGCGTGTATTTGAATTATGTGTTTGCTTACTAA

Upstream 100 bases:

>100_bases
TACTCTCTCTCTCTCTCTCTCTCTCGCTTCATCGCTTTTAAACGCTGAAGACAACGGCTTTTTTATCAGCGCGGGCTATC
AAATCGGTGAAGCCGCTCAA

Downstream 100 bases:

>100_bases
TATCTGTCTTTTTGTGAAACTCCCTTTTTAAGGGATTTTTTTTGAAGCCTTTCTTTTTTTAAACCCTCTTTTTTGGGGGT
CAAGCGTAAAATTCACCCCT

Product: outer membrane protein

Products: NA

Alternate protein names: Outer Membrane Protein HorA; Outer Membrane Protein HopQ; Outer Membrane Protein HopE; Outer Membrane Protein HopZ; Outer Membrane Protein ,Adhesin BabA BabB; Outer Membrane Protein Omp; Outer Membrane Function; Outer Membrane Protein HorK; Outer Membrane Protein HorF; Outer Membrane Protein HopB; Adhesin; Outer Membrane Protein(Omp4) HopW Protein SabB; Outer Membrane Protein HopH; Outer Membrane Protein HorL; Outer Membrane Protein/Porin; Outer Membrane Protein HopW Protein (; Outer Membrane Protein HorC; Outer Membrane Protein HorJ; Outer Membrane Protein SabB/HopO; Outer Membrane Protein HopL; Outer Membrane Protein HopC; Outer Membrane Protein,HopV BabB BabA; Outer Membrane Protein HopA; Outer Membrane Protein BabA; Outer Membrane Protein HorB; Outer Membrane Protein HopD; Outer Membrane Protein HopF; Outer Membrane Protein Adhesin; Outer Membrane Protein HopG

Number of amino acids: Translated: 634; Mature: 634

Protein sequence:

>634_residues
MVKNTGELKKLSDTYENLSNLLTNFNNLNQAVTNASSPSEINATIDNLKANTQGLIGEKTNSPAYQAVYLALNAAVGLWN
VIAYNVQCGPGKSGDQSVIFDGQPGHDSRSINCNLTGYNNGVSGPLSIDNFKTLNQAYQTIQQALKQDSGFPVLDSKGKQ
VTIKITTQTNGANKSETTTTTTTTNDAQTLLQEASKMISVLTTNCPWVNTAHNSNGGAPWNLNTTGNVCQVFATEFSAVT
SMIKNAQEIVTQAQSLNNPQSNQNAPKDFNPYTSADRAFAQNMLNHAQAQAKMLELADQMKKDLNTIPKQFITNYLAACR
NGGGTLPDAGVTSNTWGAGCAYVEETITALNNSLAHFGTQADQIKQSELLARTILDFRGSLKDLNNTYNSITTTASNTPN
SPFLKNLISQSTNPNNPGGLQAVYQVNQSAYSQLLSATQELGHNPFRRVGLISSQTNNGAMNGIGVQIGYKQFFGEKRRW
GLRYYGFFDYNHAYIKSSFFNSASDVFTYGVGTDVLYNFINDKATKNNKISFGVFGGIALAGTSWLNSQYVNLATFNNFY
SAKMNVANFQFLFNLGLRMNLAKNKKKASDHVAQHGVELGVKIPTINTNYYSLLGTQLQYRRLYSVYLNYVFAY

Sequences:

>Translated_634_residues
MVKNTGELKKLSDTYENLSNLLTNFNNLNQAVTNASSPSEINATIDNLKANTQGLIGEKTNSPAYQAVYLALNAAVGLWN
VIAYNVQCGPGKSGDQSVIFDGQPGHDSRSINCNLTGYNNGVSGPLSIDNFKTLNQAYQTIQQALKQDSGFPVLDSKGKQ
VTIKITTQTNGANKSETTTTTTTTNDAQTLLQEASKMISVLTTNCPWVNTAHNSNGGAPWNLNTTGNVCQVFATEFSAVT
SMIKNAQEIVTQAQSLNNPQSNQNAPKDFNPYTSADRAFAQNMLNHAQAQAKMLELADQMKKDLNTIPKQFITNYLAACR
NGGGTLPDAGVTSNTWGAGCAYVEETITALNNSLAHFGTQADQIKQSELLARTILDFRGSLKDLNNTYNSITTTASNTPN
SPFLKNLISQSTNPNNPGGLQAVYQVNQSAYSQLLSATQELGHNPFRRVGLISSQTNNGAMNGIGVQIGYKQFFGEKRRW
GLRYYGFFDYNHAYIKSSFFNSASDVFTYGVGTDVLYNFINDKATKNNKISFGVFGGIALAGTSWLNSQYVNLATFNNFY
SAKMNVANFQFLFNLGLRMNLAKNKKKASDHVAQHGVELGVKIPTINTNYYSLLGTQLQYRRLYSVYLNYVFAY
>Mature_634_residues
MVKNTGELKKLSDTYENLSNLLTNFNNLNQAVTNASSPSEINATIDNLKANTQGLIGEKTNSPAYQAVYLALNAAVGLWN
VIAYNVQCGPGKSGDQSVIFDGQPGHDSRSINCNLTGYNNGVSGPLSIDNFKTLNQAYQTIQQALKQDSGFPVLDSKGKQ
VTIKITTQTNGANKSETTTTTTTTNDAQTLLQEASKMISVLTTNCPWVNTAHNSNGGAPWNLNTTGNVCQVFATEFSAVT
SMIKNAQEIVTQAQSLNNPQSNQNAPKDFNPYTSADRAFAQNMLNHAQAQAKMLELADQMKKDLNTIPKQFITNYLAACR
NGGGTLPDAGVTSNTWGAGCAYVEETITALNNSLAHFGTQADQIKQSELLARTILDFRGSLKDLNNTYNSITTTASNTPN
SPFLKNLISQSTNPNNPGGLQAVYQVNQSAYSQLLSATQELGHNPFRRVGLISSQTNNGAMNGIGVQIGYKQFFGEKRRW
GLRYYGFFDYNHAYIKSSFFNSASDVFTYGVGTDVLYNFINDKATKNNKISFGVFGGIALAGTSWLNSQYVNLATFNNFY
SAKMNVANFQFLFNLGLRMNLAKNKKKASDHVAQHGVELGVKIPTINTNYYSLLGTQLQYRRLYSVYLNYVFAY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69291; Mature: 69291

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKNTGELKKLSDTYENLSNLLTNFNNLNQAVTNASSPSEINATIDNLKANTQGLIGEKT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCC
NSPAYQAVYLALNAAVGLWNVIAYNVQCGPGKSGDQSVIFDGQPGHDSRSINCNLTGYNN
CCCHHHHHHHHHHHHHHHEEHHEEEEECCCCCCCCCCEEECCCCCCCCCEEEEEEECCCC
GVSGPLSIDNFKTLNQAYQTIQQALKQDSGFPVLDSKGKQVTIKITTQTNGANKSETTTT
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEEEEEECCCCCCCCCCEE
TTTTNDAQTLLQEASKMISVLTTNCPWVNTAHNSNGGAPWNLNTTGNVCQVFATEFSAVT
EECCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCEECCCCCCHHHHHHHHHHHHH
SMIKNAQEIVTQAQSLNNPQSNQNAPKDFNPYTSADRAFAQNMLNHAQAQAKMLELADQM
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKDLNTIPKQFITNYLAACRNGGGTLPDAGVTSNTWGAGCAYVEETITALNNSLAHFGTQ
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
ADQIKQSELLARTILDFRGSLKDLNNTYNSITTTASNTPNSPFLKNLISQSTNPNNPGGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHCCCCCCCCCHH
QAVYQVNQSAYSQLLSATQELGHNPFRRVGLISSQTNNGAMNGIGVQIGYKQFFGEKRRW
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCEECCCCCCCCCCEEEEECHHHHCCHHHCC
GLRYYGFFDYNHAYIKSSFFNSASDVFTYGVGTDVLYNFINDKATKNNKISFGVFGGIAL
CEEEEEEECCCHHHHHHHHCCCHHHHEEECCHHHHHHHHHHCCCCCCCCEEEEECCCHHH
AGTSWLNSQYVNLATFNNFYSAKMNVANFQFLFNLGLRMNLAKNKKKASDHVAQHGVELG
HHHHHCCCCEEEEEEECCHHHCCCCHHHHHEEECCCCEEEHHHCHHHHHHHHHHCCCEEC
VKIPTINTNYYSLLGTQLQYRRLYSVYLNYVFAY
EEECEECCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVKNTGELKKLSDTYENLSNLLTNFNNLNQAVTNASSPSEINATIDNLKANTQGLIGEKT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCC
NSPAYQAVYLALNAAVGLWNVIAYNVQCGPGKSGDQSVIFDGQPGHDSRSINCNLTGYNN
CCCHHHHHHHHHHHHHHHEEHHEEEEECCCCCCCCCCEEECCCCCCCCCEEEEEEECCCC
GVSGPLSIDNFKTLNQAYQTIQQALKQDSGFPVLDSKGKQVTIKITTQTNGANKSETTTT
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEEEEEECCCCCCCCCCEE
TTTTNDAQTLLQEASKMISVLTTNCPWVNTAHNSNGGAPWNLNTTGNVCQVFATEFSAVT
EECCHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCEECCCCCCHHHHHHHHHHHHH
SMIKNAQEIVTQAQSLNNPQSNQNAPKDFNPYTSADRAFAQNMLNHAQAQAKMLELADQM
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKDLNTIPKQFITNYLAACRNGGGTLPDAGVTSNTWGAGCAYVEETITALNNSLAHFGTQ
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
ADQIKQSELLARTILDFRGSLKDLNNTYNSITTTASNTPNSPFLKNLISQSTNPNNPGGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHCCCCCCCCCHH
QAVYQVNQSAYSQLLSATQELGHNPFRRVGLISSQTNNGAMNGIGVQIGYKQFFGEKRRW
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCEECCCCCCCCCCEEEEECHHHHCCHHHCC
GLRYYGFFDYNHAYIKSSFFNSASDVFTYGVGTDVLYNFINDKATKNNKISFGVFGGIAL
CEEEEEEECCCHHHHHHHHCCCHHHHEEECCHHHHHHHHHHCCCCCCCCEEEEECCCHHH
AGTSWLNSQYVNLATFNNFYSAKMNVANFQFLFNLGLRMNLAKNKKKASDHVAQHGVELG
HHHHHCCCCEEEEEEECCHHHCCCCHHHHHEEECCCCEEEHHHCHHHHHHHHHHCCCEEC
VKIPTINTNYYSLLGTQLQYRRLYSVYLNYVFAY
EEECEECCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA