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The map label for this gene is nolO

Identifier: 16519760

GI number: 16519760

Start: 439076

End: 441118

Strand: Direct

Name: nolO

Synonym: NGR_a03460

Alternate gene names: 16519760

Gene position: 439076-441118 (Clockwise)

Preceding gene: 16519761

Following gene: 16519759

Centisome position: 81.89

GC content: 54.33

Gene sequence:

>2043_bases
ATGCTGTGTCTAGGACTTAGTGGCGGTCTAAGCAAGATTCACGAAAACTCGCTCGATCTGCCGAATACATTTATGCACGA
CGGTGCAGCGGTTCTCGTCCGAGACGGCCAAGTGATAGCTGCTGTCGAAGAGGAGCGACTTAACAGAATCAAACATTCCA
ACAAGCTGCCGCGCCGGTCGATTCAATACTGCCTTGAATACGCCGGGGTTCAACTCAGCGACATCGACTGCATCGCGTAT
TATGCAACCGAGGCGTTTTGCAATGCTATGCTCGAGCGCCTGCTCGTTTCTCAGTCGCACATGTCAATACCGTTGGATGC
CAAGCTGTTGTTGCGTGGGTTGCTCGCGCAGGAATTTGGTACTGAGGTCGATCCGTCGCGAATCTCATTCGTAAGCCATC
ACCTGTCGCACGCCTGGAGCGCGTTTTCTATGTCTGGTTTCGAACAAAGTCTCATCTTGACAATTGATGGCGGTGGAGAC
TTCGCCTCGGGTCTTTTGGCGGTAGGATCCGGCACGGAAGTCAAACCGCTTGCGACATTTCCGGAGAGCGATTCTTTAGG
GCTTTTGTACCTTGAGACCATAAAATATCTCGGTTACGGCATGTTTGATGAATACAAGGTCATGGGGCTTGCACCGTACG
GCGACCCCGCTCCCCATCGCGACCTCTTCGAACAGTTCTACGAGCTATTAGACAACGGTGGCTACCGGATCTATCTGGAC
CGGATTGGTCCCACGCTGCTTCGCAGCATTGAGGTACGCCGAAAAGGAATGCCGTTCACTCAGCAGCATAAAGATTTAAG
TGCTTCGTTGCAAGAAGCACTCGAACGGATTGTGTTTCACGTTCTACGGCATCACAGCGAGATCACCGGCATAAAGCGCT
TGAGCTTGGCCGGAGGAGTAGCTCACAACTGCACATTGAACGGCAAGCTGTTGCGCTCGGGAATCTTCCAAGACATCTTC
GTGCAACCCGCGGCACACGACGCTGGCTGCGCATTAGGCGCTGCATTGATGATGTCTAATGAACTAGGGCAGTCCGCACC
TCGGGAGCGTTTGCAGGAGGTCTATTGGGGTCCTGATCTCGGGAGCGACCGCGCCGTGGAGCAGGAATTAATAGCATGGG
GCGGCCACATTGAAATCGAACGCTGCGATGATGTGGCCAGCAGAGCAGCCGAGTGGATCGCCGATGGCGCCGTGATCGGC
TGGGTGCAGGGACGATCGGAATTCGGACCGCGTGCGCTTGGCAACCGTAGCATTCTTGCCGACCCTAGGCCAGCCACAAA
CAAGGATCGGATCAACGCGATTGTCAAGAAGCGCGAAGGCTATCGCCCCTTTGCGCCATCCGTGTTGGAGGAGGACGCCA
ACGAGTTCTTTGAATTGCCAGATAGCAGGCAGGAATTTCCCTTTATGAATTTCGTAGTGCCTGTGCGCGAATCGAAGCGC
AATCTGCTCGGTGCCGTCACGCATGTCGATGGTACGGCGCGCTTGCAAACAGTATCGCGCAACATCAATCAAGCGTATTG
GGAGGTCATCAACGCCTTCAGGAAACGAACAGGTGTCCCGATTCTGCTCAACACGTCCTTCAACAATAATGTTGAGCCGA
TAGTGGATTCGGTTGCGGATGCGGTGACCACATTTTTGACCACCGACTTGGATGGACTCGTGGTTGGGTCATATCTCATC
AAGAAGCGGACTGCGTCACCGGAGGATTGGAGTAGACTTGCGCTTTCGTTGCCGCCTTATTCAAGCCTCCATCAAGTGCG
TGCATTTACGGCGTTAGATCGCCAAGAGACGGTATGCGAGATCCGCACGGGTCCCTCCAGCCGAGAAGCCGTGCGGATTT
CATCCGAGTTGTTCGAACTGCTAATGCGGATTGATGGAGAAGCTCCGCTCGGCGATATCTTGGACCTCATCGCGCCCAAT
CAGAACCAGCGTGAAGCGCTCCTAAATGAACTGCGTGGGCTTTGGGAGCAGCGTAGCGTGCGACTGCATCCAATGCGCGC
CGACTCTGCAGCGGAACCACTATCAAGTCCAATCAATCTGTAA

Upstream 100 bases:

>100_bases
GACCTACGGCAGAAAGAGCACTGCTTGAGCTTAGCAAACGACTAAATTCAGTCGGAGCACATGGCCTACCTGTTACAAGT
GACGAGAGATTGGAGACAAC

Downstream 100 bases:

>100_bases
AGCGGTGCCCGCCTATGACAATCGCGGTAGTTCCGTCCCTCTCCTTCACCCATGCTGGTGGGGCCGAGACGCTCATGAGT
GATGGCGCGGCATTTGACAG

Product: nodulation protein NolO

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 680; Mature: 680

Protein sequence:

>680_residues
MLCLGLSGGLSKIHENSLDLPNTFMHDGAAVLVRDGQVIAAVEEERLNRIKHSNKLPRRSIQYCLEYAGVQLSDIDCIAY
YATEAFCNAMLERLLVSQSHMSIPLDAKLLLRGLLAQEFGTEVDPSRISFVSHHLSHAWSAFSMSGFEQSLILTIDGGGD
FASGLLAVGSGTEVKPLATFPESDSLGLLYLETIKYLGYGMFDEYKVMGLAPYGDPAPHRDLFEQFYELLDNGGYRIYLD
RIGPTLLRSIEVRRKGMPFTQQHKDLSASLQEALERIVFHVLRHHSEITGIKRLSLAGGVAHNCTLNGKLLRSGIFQDIF
VQPAAHDAGCALGAALMMSNELGQSAPRERLQEVYWGPDLGSDRAVEQELIAWGGHIEIERCDDVASRAAEWIADGAVIG
WVQGRSEFGPRALGNRSILADPRPATNKDRINAIVKKREGYRPFAPSVLEEDANEFFELPDSRQEFPFMNFVVPVRESKR
NLLGAVTHVDGTARLQTVSRNINQAYWEVINAFRKRTGVPILLNTSFNNNVEPIVDSVADAVTTFLTTDLDGLVVGSYLI
KKRTASPEDWSRLALSLPPYSSLHQVRAFTALDRQETVCEIRTGPSSREAVRISSELFELLMRIDGEAPLGDILDLIAPN
QNQREALLNELRGLWEQRSVRLHPMRADSAAEPLSSPINL

Sequences:

>Translated_680_residues
MLCLGLSGGLSKIHENSLDLPNTFMHDGAAVLVRDGQVIAAVEEERLNRIKHSNKLPRRSIQYCLEYAGVQLSDIDCIAY
YATEAFCNAMLERLLVSQSHMSIPLDAKLLLRGLLAQEFGTEVDPSRISFVSHHLSHAWSAFSMSGFEQSLILTIDGGGD
FASGLLAVGSGTEVKPLATFPESDSLGLLYLETIKYLGYGMFDEYKVMGLAPYGDPAPHRDLFEQFYELLDNGGYRIYLD
RIGPTLLRSIEVRRKGMPFTQQHKDLSASLQEALERIVFHVLRHHSEITGIKRLSLAGGVAHNCTLNGKLLRSGIFQDIF
VQPAAHDAGCALGAALMMSNELGQSAPRERLQEVYWGPDLGSDRAVEQELIAWGGHIEIERCDDVASRAAEWIADGAVIG
WVQGRSEFGPRALGNRSILADPRPATNKDRINAIVKKREGYRPFAPSVLEEDANEFFELPDSRQEFPFMNFVVPVRESKR
NLLGAVTHVDGTARLQTVSRNINQAYWEVINAFRKRTGVPILLNTSFNNNVEPIVDSVADAVTTFLTTDLDGLVVGSYLI
KKRTASPEDWSRLALSLPPYSSLHQVRAFTALDRQETVCEIRTGPSSREAVRISSELFELLMRIDGEAPLGDILDLIAPN
QNQREALLNELRGLWEQRSVRLHPMRADSAAEPLSSPINL
>Mature_680_residues
MLCLGLSGGLSKIHENSLDLPNTFMHDGAAVLVRDGQVIAAVEEERLNRIKHSNKLPRRSIQYCLEYAGVQLSDIDCIAY
YATEAFCNAMLERLLVSQSHMSIPLDAKLLLRGLLAQEFGTEVDPSRISFVSHHLSHAWSAFSMSGFEQSLILTIDGGGD
FASGLLAVGSGTEVKPLATFPESDSLGLLYLETIKYLGYGMFDEYKVMGLAPYGDPAPHRDLFEQFYELLDNGGYRIYLD
RIGPTLLRSIEVRRKGMPFTQQHKDLSASLQEALERIVFHVLRHHSEITGIKRLSLAGGVAHNCTLNGKLLRSGIFQDIF
VQPAAHDAGCALGAALMMSNELGQSAPRERLQEVYWGPDLGSDRAVEQELIAWGGHIEIERCDDVASRAAEWIADGAVIG
WVQGRSEFGPRALGNRSILADPRPATNKDRINAIVKKREGYRPFAPSVLEEDANEFFELPDSRQEFPFMNFVVPVRESKR
NLLGAVTHVDGTARLQTVSRNINQAYWEVINAFRKRTGVPILLNTSFNNNVEPIVDSVADAVTTFLTTDLDGLVVGSYLI
KKRTASPEDWSRLALSLPPYSSLHQVRAFTALDRQETVCEIRTGPSSREAVRISSELFELLMRIDGEAPLGDILDLIAPN
QNQREALLNELRGLWEQRSVRLHPMRADSAAEPLSSPINL

Specific function: Involved in the O-carbamoylation of nod factors

COG id: COG2192

COG function: function code O; Predicted carbamoyl transferase, NodU family

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NodU/CmcH family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NOLO_RHISN (P55474)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443880.1
- ProteinModelPortal:   P55474
- GeneID:   962316
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a03460
- HOGENOM:   HBG539759
- ProtClustDB:   CLSK506543
- GO:   GO:0005737
- GO:   GO:0009877
- InterPro:   IPR003696

Pfam domain/function: PF02543 CmcH_NodU

EC number: NA

Molecular weight: Translated: 75435; Mature: 75435

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCLGLSGGLSKIHENSLDLPNTFMHDGAAVLVRDGQVIAAVEEERLNRIKHSNKLPRRS
CEEEECCCCHHHHHHCCCCCCCHHHCCCCEEEEECCCEEEEHHHHHHHHHHHCCCCCHHH
IQYCLEYAGVQLSDIDCIAYYATEAFCNAMLERLLVSQSHMSIPLDAKLLLRGLLAQEFG
HHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHC
TEVDPSRISFVSHHLSHAWSAFSMSGFEQSLILTIDGGGDFASGLLAVGSGTEVKPLATF
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHEEECCCCCCCEEECC
PESDSLGLLYLETIKYLGYGMFDEYKVMGLAPYGDPAPHRDLFEQFYELLDNGGYRIYLD
CCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEH
RIGPTLLRSIEVRRKGMPFTQQHKDLSASLQEALERIVFHVLRHHSEITGIKRLSLAGGV
HCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AHNCTLNGKLLRSGIFQDIFVQPAAHDAGCALGAALMMSNELGQSAPRERLQEVYWGPDL
CCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCC
GSDRAVEQELIAWGGHIEIERCDDVASRAAEWIADGAVIGWVQGRSEFGPRALGNRSILA
CCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEC
DPRPATNKDRINAIVKKREGYRPFAPSVLEEDANEFFELPDSRQEFPFMNFVVPVRESKR
CCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHEEEEHHHHHH
NLLGAVTHVDGTARLQTVSRNINQAYWEVINAFRKRTGVPILLNTSFNNNVEPIVDSVAD
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHH
AVTTFLTTDLDGLVVGSYLIKKRTASPEDWSRLALSLPPYSSLHQVRAFTALDRQETVCE
HHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHEEEECCCCHHHHHHHHHHHHCCHHHHEE
IRTGPSSREAVRISSELFELLMRIDGEAPLGDILDLIAPNQNQREALLNELRGLWEQRSV
ECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
RLHPMRADSAAEPLSSPINL
EEECCCCCCCHHHCCCCCCC
>Mature Secondary Structure
MLCLGLSGGLSKIHENSLDLPNTFMHDGAAVLVRDGQVIAAVEEERLNRIKHSNKLPRRS
CEEEECCCCHHHHHHCCCCCCCHHHCCCCEEEEECCCEEEEHHHHHHHHHHHCCCCCHHH
IQYCLEYAGVQLSDIDCIAYYATEAFCNAMLERLLVSQSHMSIPLDAKLLLRGLLAQEFG
HHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHC
TEVDPSRISFVSHHLSHAWSAFSMSGFEQSLILTIDGGGDFASGLLAVGSGTEVKPLATF
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHEEECCCCCCCEEECC
PESDSLGLLYLETIKYLGYGMFDEYKVMGLAPYGDPAPHRDLFEQFYELLDNGGYRIYLD
CCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEH
RIGPTLLRSIEVRRKGMPFTQQHKDLSASLQEALERIVFHVLRHHSEITGIKRLSLAGGV
HCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
AHNCTLNGKLLRSGIFQDIFVQPAAHDAGCALGAALMMSNELGQSAPRERLQEVYWGPDL
CCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCC
GSDRAVEQELIAWGGHIEIERCDDVASRAAEWIADGAVIGWVQGRSEFGPRALGNRSILA
CCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEC
DPRPATNKDRINAIVKKREGYRPFAPSVLEEDANEFFELPDSRQEFPFMNFVVPVRESKR
CCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHEEEEHHHHHH
NLLGAVTHVDGTARLQTVSRNINQAYWEVINAFRKRTGVPILLNTSFNNNVEPIVDSVAD
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHH
AVTTFLTTDLDGLVVGSYLIKKRTASPEDWSRLALSLPPYSSLHQVRAFTALDRQETVCE
HHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHEEEECCCCHHHHHHHHHHHHCCHHHHEE
IRTGPSSREAVRISSELFELLMRIDGEAPLGDILDLIAPNQNQREALLNELRGLWEQRSV
ECCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
RLHPMRADSAAEPLSSPINL
EEECCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424