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Identifier: 16519745

GI number: 16519745

Start: 464618

End: 465196

Strand: Direct

Name: Not Available

Synonym: NGR_a03610

Alternate gene names: 16519745

Gene position: 464618-465196 (Clockwise)

Preceding gene: 16519752

Following gene: 16519744

Centisome position: 86.66

GC content: 59.59

Gene sequence:

>579_bases
GTGCCTTCCATTTTGGAGCGGGACCAAATCGCAGCGGTTCTGGTAAGTGCGAGCAGGGACAAAACGCCGGCCGGCTTGCG
GGACCATGCGATATTACAACTGCTCGCCACCTACGGACTGCGATCAGGAGAAATCCGCAACATGCGGATTGAGGATATCG
ATTGGCGGACCGAAACCATTCGTGTCCGTCACAGCAAAACGCAAGCCTACACGCTCCTTCCCTTGACGGAGCCGGTTGGC
GAAGCAATCCTTGTTTATCTGCGTTCCGGACGGCCCGCGACAGATGCGAGAGAACTCTTCGTTCGCACGCGTGCACCCTA
TCGCAAGCTCGACAAGCTATACAGCATGGTTCGACGGCGGCTACGTGACGCTGGCGTCAAACCCCGGGGCAAGCGTGGGC
CTCATATCTTCCGCCACGCGCGCGCGACCGAACTGTTGCGCGCCGCGGTGCCACAAAAGATCATCGGTGAGTTGTTGGGG
CATCGATCGATTGCGTCGACGGCGCCCTACCTCAAGCTTGCGACCGAGGATCTCAGGGCCATCGCTCTTGATTTGCCGGG
AACGGAGGTGTCGGCATGA

Upstream 100 bases:

>100_bases
GCGGCTTCACTCGCTGCTGCGTTATCTCCATCGGACAAGGCTCATTGGAACGGACCTGTCGCCGCATGTTCTGGCGCCGC
GGCTTTACGCCTATGAAGGC

Downstream 100 bases:

>100_bases
CCGCCCGTTGGCCCGATCCCGATCGCGCGTACATTGGCCGCTATGTCGCGAGCCTTGATCTGCGCAGTATCAAAAGCCGG
ACTTGTTACCGTCAAGTCCT

Product: DNA integration/recombination/inversion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MPSILERDQIAAVLVSASRDKTPAGLRDHAILQLLATYGLRSGEIRNMRIEDIDWRTETIRVRHSKTQAYTLLPLTEPVG
EAILVYLRSGRPATDARELFVRTRAPYRKLDKLYSMVRRRLRDAGVKPRGKRGPHIFRHARATELLRAAVPQKIIGELLG
HRSIASTAPYLKLATEDLRAIALDLPGTEVSA

Sequences:

>Translated_192_residues
MPSILERDQIAAVLVSASRDKTPAGLRDHAILQLLATYGLRSGEIRNMRIEDIDWRTETIRVRHSKTQAYTLLPLTEPVG
EAILVYLRSGRPATDARELFVRTRAPYRKLDKLYSMVRRRLRDAGVKPRGKRGPHIFRHARATELLRAAVPQKIIGELLG
HRSIASTAPYLKLATEDLRAIALDLPGTEVSA
>Mature_191_residues
PSILERDQIAAVLVSASRDKTPAGLRDHAILQLLATYGLRSGEIRNMRIEDIDWRTETIRVRHSKTQAYTLLPLTEPVGE
AILVYLRSGRPATDARELFVRTRAPYRKLDKLYSMVRRRLRDAGVKPRGKRGPHIFRHARATELLRAAVPQKIIGELLGH
RSIASTAPYLKLATEDLRAIALDLPGTEVSA

Specific function: Site-Specific Tyrosine Recombinase, Which Acts By Catalyzing The Cutting And Rejoining Of The Recombining DNA Molecules. Binds Cooperatively To Specific DNA Consensus Sequences That Are Separated From Xerc Binding Sites By A Short Central Region, Forming

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family

Homologues:

Organism=Escherichia coli, GI1789261, Length=185, Percent_Identity=31.3513513513514, Blast_Score=74, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4GC_RHISN (P55459)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443865.1
- ProteinModelPortal:   P55459
- SMR:   P55459
- GeneID:   962564
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a03610
- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- Gene3D:   G3DSA:1.10.443.10

Pfam domain/function: PF00589 Phage_integrase; SSF56349 DNA_brk_join_enz

EC number: NA

Molecular weight: Translated: 21577; Mature: 21446

Theoretical pI: Translated: 11.13; Mature: 11.13

Prosite motif: NA

Important sites: ACT_SITE 170-170

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSILERDQIAAVLVSASRDKTPAGLRDHAILQLLATYGLRSGEIRNMRIEDIDWRTETI
CCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEECCCCCCHHEE
RVRHSKTQAYTLLPLTEPVGEAILVYLRSGRPATDARELFVRTRAPYRKLDKLYSMVRRR
EEEECCCCEEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHH
LRDAGVKPRGKRGPHIFRHARATELLRAAVPQKIIGELLGHRSIASTAPYLKLATEDLRA
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHCCCHHHHHHHHHHE
IALDLPGTEVSA
EEEECCCCCCCC
>Mature Secondary Structure 
PSILERDQIAAVLVSASRDKTPAGLRDHAILQLLATYGLRSGEIRNMRIEDIDWRTETI
CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEECCCCCCHHEE
RVRHSKTQAYTLLPLTEPVGEAILVYLRSGRPATDARELFVRTRAPYRKLDKLYSMVRRR
EEEECCCCEEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHH
LRDAGVKPRGKRGPHIFRHARATELLRAAVPQKIIGELLGHRSIASTAPYLKLATEDLRA
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHCCCHHHHHHHHHHE
IALDLPGTEVSA
EEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424