| Definition | Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence. |
|---|---|
| Accession | NC_000914 |
| Length | 536,165 |
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Identifier: 16519732
GI number: 16519732
Start: 480370
End: 480759
Strand: Direct
Name: Not Available
Synonym: NGR_a03740
Alternate gene names: NA
Gene position: 480370-480759 (Clockwise)
Preceding gene: 16519733
Following gene: 16519731
Centisome position: 89.59
GC content: 54.87
Gene sequence:
>390_bases ATGCATCCGGGATCAAAAACAATGCGATATCCTCATCCGTGCCGCGCGACCATGTTCGAGGCGGTCTTCCGCCGCAGGCT CGATGCATTGGGCATGACGATATCGGGCTCTCTGGCAACATCGGAGCTTCGGAACACATTCCGCCAGGAAACGATCATGC GCCACTGGGCCGTTTCGAAAGAGTTCAGCGGTATGTCGCCGGAAGAGCGCGACGAACGCCTGCTGACCATTGCACACCTA GAGCCTATTGCAGCTCATGTCCTAGCGTCAGATGATTGCATTTTCGACGTTTCAAGGATTGGTGCCGATCTGATGGAACT GGACTTGCGGGAAAACGGAGGCTCAGGACATCAAGCTTCCAGCGAAACAGGCTTTCATCATGTTCGGTGA
Upstream 100 bases:
>100_bases GGGGACATCATTTCAAATGCCTGGGCTTCATTCCTGTTATAAACTGCCCACACCGAACCGAGCTTCTTGCTTGCAGAGAT TTTGATCAGGCTGGGTGTGA
Downstream 100 bases:
>100_bases ACAGCCAGGCCTGCAGGTCGATAACCAATCGGGCTTGTTCATCGAAGGCGCATATGTTTCCAGGTCCGATGAGGGCGACG GCGGCATCGATATCATACTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MHPGSKTMRYPHPCRATMFEAVFRRRLDALGMTISGSLATSELRNTFRQETIMRHWAVSKEFSGMSPEERDERLLTIAHL EPIAAHVLASDDCIFDVSRIGADLMELDLRENGGSGHQASSETGFHHVR
Sequences:
>Translated_129_residues MHPGSKTMRYPHPCRATMFEAVFRRRLDALGMTISGSLATSELRNTFRQETIMRHWAVSKEFSGMSPEERDERLLTIAHL EPIAAHVLASDDCIFDVSRIGADLMELDLRENGGSGHQASSETGFHHVR >Mature_129_residues MHPGSKTMRYPHPCRATMFEAVFRRRLDALGMTISGSLATSELRNTFRQETIMRHWAVSKEFSGMSPEERDERLLTIAHL EPIAAHVLASDDCIFDVSRIGADLMELDLRENGGSGHQASSETGFHHVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y4FG_RHISN (P55445)
Other databases:
- EMBL: U00090 - RefSeq: NP_443852.1 - GeneID: 962594 - GenomeReviews: U00090_GR - KEGG: rhi:NGR_a03740
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14524; Mature: 14524
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPGSKTMRYPHPCRATMFEAVFRRRLDALGMTISGSLATSELRNTFRQETIMRHWAVSK CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH EFSGMSPEERDERLLTIAHLEPIAAHVLASDDCIFDVSRIGADLMELDLRENGGSGHQAS HCCCCCCCCHHHHEEHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHCCCCCCCCCC SETGFHHVR CCCCCCCCC >Mature Secondary Structure MHPGSKTMRYPHPCRATMFEAVFRRRLDALGMTISGSLATSELRNTFRQETIMRHWAVSK CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH EFSGMSPEERDERLLTIAHLEPIAAHVLASDDCIFDVSRIGADLMELDLRENGGSGHQAS HCCCCCCCCHHHHEEHHHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHCCCCCCCCCC SETGFHHVR CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424