Definition Sinorhizobium fredii NGR234 plasmid pNGR234a, complete sequence.
Accession NC_000914
Length 536,165

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Identifier: 16519733

GI number: 16519733

Start: 479315

End: 479623

Strand: Direct

Name: Not Available

Synonym: NGR_a03730

Alternate gene names: NA

Gene position: 479315-479623 (Clockwise)

Preceding gene: 16519734

Following gene: 16519732

Centisome position: 89.4

GC content: 46.93

Gene sequence:

>309_bases
ATGATGCTGTATTCTGCTCAAATATCAACATATTACGACTTCAAGAAGCGTGTATTTCAGCTGTACTACTACACCGGCGA
TACCGCGATGACGTCGGAAAGTGCAGCTGTTGAAAGCGCTGTTGTAATCATTTCAAAGGCGTCAATCATTAATAAGTTTC
TGGCAATCGATGCCGGGGATCACGATGCCGAAAGTATGCTGGCCTCCGGGGATTTTAATTTCGCTGTCTCGCGGTCAGTT
CGAATGAGCTGTGACTGGTGCTATTGGTTACGCTTTCTCAGCGACTTTCCCCCATTCTTCGCCCAATGA

Upstream 100 bases:

>100_bases
TCTCTTATCTGTTCATTTCCCATGACCTTGGCGTGGTCGACCACATCAGCGATCATGTGGGCAGCAAACAAGCCATAGTG
ATCTGGAAATCAGCCGCAGA

Downstream 100 bases:

>100_bases
AGAAAGCCGCCAAACAGCCCCCGGCAGATAACTGGAAGCAAACGCGCCGCGTTGTCCTGCGTGATGACTTTAGATGCGTG
TCGTGCTCGACTAAGGTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MMLYSAQISTYYDFKKRVFQLYYYTGDTAMTSESAAVESAVVIISKASIINKFLAIDAGDHDAESMLASGDFNFAVSRSV
RMSCDWCYWLRFLSDFPPFFAQ

Sequences:

>Translated_102_residues
MMLYSAQISTYYDFKKRVFQLYYYTGDTAMTSESAAVESAVVIISKASIINKFLAIDAGDHDAESMLASGDFNFAVSRSV
RMSCDWCYWLRFLSDFPPFFAQ
>Mature_102_residues
MMLYSAQISTYYDFKKRVFQLYYYTGDTAMTSESAAVESAVVIISKASIINKFLAIDAGDHDAESMLASGDFNFAVSRSV
RMSCDWCYWLRFLSDFPPFFAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y4FH_RHISN (P55446)

Other databases:

- EMBL:   U00090
- RefSeq:   NP_443853.1
- GeneID:   962302
- GenomeReviews:   U00090_GR
- KEGG:   rhi:NGR_a03730

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11622; Mature: 11622

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLYSAQISTYYDFKKRVFQLYYYTGDTAMTSESAAVESAVVIISKASIINKFLAIDAGD
CEEEECHHHHHHHHHHHHEEEEEEECCCCCCCCCHHHHHHHEEEEHHHHHHHHHEECCCC
HDAESMLASGDFNFAVSRSVRMSCDWCYWLRFLSDFPPFFAQ
CCHHHHHHCCCCCEEEECCEECCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MMLYSAQISTYYDFKKRVFQLYYYTGDTAMTSESAAVESAVVIISKASIINKFLAIDAGD
CEEEECHHHHHHHHHHHHEEEEEEECCCCCCCCCHHHHHHHEEEEHHHHHHHHHEECCCC
HDAESMLASGDFNFAVSRSVRMSCDWCYWLRFLSDFPPFFAQ
CCHHHHHHCCCCCEEEECCEECCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424