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The map label for this gene is ygaD [C]

Identifier: 13507993

GI number: 13507993

Start: 305066

End: 305539

Strand: Direct

Name: ygaD [C]

Synonym: MPN254

Alternate gene names: 13507993

Gene position: 305066-305539 (Clockwise)

Preceding gene: 13507992

Following gene: 13507994

Centisome position: 37.37

GC content: 41.77

Gene sequence:

>474_bases
GTGTACGCGCGCTTAATTGCTGAAAAACTGCTAAATCATAAGCTCACCATTGCCACTGCAGAGTCAGTTACTGGGGGCCT
TTTGAGTAGTAGCTTAACCGACATCGCTGGTGCTTCTCGTTTCTTTAAGGGTGCCATTGTGGCATACAGCAATGAATTGA
AAAAATCACTTTTAAATGTCAAACAATCAACCTTAATTAACCACGGTGCTGTATCGCGTTATTGTGTTCGTGAAATGGCG
TTAGGTTTAATGCAAAAACTCAATGTTGATATTGCCGTGGCCTGCAGTGGGGTAGCGGGTCCTGATGCATTGGAAAACCA
AGCAGTTGGTAGCTTGTTTTTCTGTGTGATTGTTGCCAACAAGGCTTATGACTTTGAAACAAAACTACCAGCTGGCTCTA
GAAACGAATTGCGCCAGCTTTTTGTGCAAAAAATCTTGCAAACAGTTGAACACATTTTAAGTGAAATTTCTTAG

Upstream 100 bases:

>100_bases
TACAGCCTTCTCCTTGGTCTCGTTTGGTATTTACGCCCAACAAATATATAAAACCATTAAGGTTAAAGTAAAGTTATAAT
TTTGGAACTTTCTTATTGTT

Downstream 100 bases:

>100_bases
GTTAAATAAGGTTTAAGAGAACAAGATGCAGCGTACTTTAAATGTTGGGGTGATCCTGTGTGAAAGCTTTATTTCCAACG
CCCAAAACCCAGTTAACTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MYARLIAEKLLNHKLTIATAESVTGGLLSSSLTDIAGASRFFKGAIVAYSNELKKSLLNVKQSTLINHGAVSRYCVREMA
LGLMQKLNVDIAVACSGVAGPDALENQAVGSLFFCVIVANKAYDFETKLPAGSRNELRQLFVQKILQTVEHILSEIS

Sequences:

>Translated_157_residues
MYARLIAEKLLNHKLTIATAESVTGGLLSSSLTDIAGASRFFKGAIVAYSNELKKSLLNVKQSTLINHGAVSRYCVREMA
LGLMQKLNVDIAVACSGVAGPDALENQAVGSLFFCVIVANKAYDFETKLPAGSRNELRQLFVQKILQTVEHILSEIS
>Mature_157_residues
MYARLIAEKLLNHKLTIATAESVTGGLLSSSLTDIAGASRFFKGAIVAYSNELKKSLLNVKQSTLINHGAVSRYCVREMA
LGLMQKLNVDIAVACSGVAGPDALENQAVGSLFFCVIVANKAYDFETKLPAGSRNELRQLFVQKILQTVEHILSEIS

Specific function: Unknown

COG id: COG1546

COG function: function code R; Uncharacterized protein (competence- and mitomycin-induced)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CinA family

Homologues:

Organism=Escherichia coli, GI1789052, Length=145, Percent_Identity=37.9310344827586, Blast_Score=103, Evalue=5e-24,
Organism=Escherichia coli, GI1787818, Length=119, Percent_Identity=29.4117647058824, Blast_Score=73, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y254_MYCPN (Q9EXC9)

Other databases:

- EMBL:   U00089
- RefSeq:   NP_109942.1
- ProteinModelPortal:   Q9EXC9
- SMR:   Q9EXC9
- GeneID:   876878
- GenomeReviews:   U00089_GR
- KEGG:   mpn:MPN254
- HOGENOM:   HBG572016
- OMA:   NKAYDFE
- ProtClustDB:   CLSK542152
- BioCyc:   MPNE272634:MPN254-MONOMER
- InterPro:   IPR008136
- TIGRFAMs:   TIGR00199

Pfam domain/function: PF02464 CinA

EC number: NA

Molecular weight: Translated: 16959; Mature: 16959

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYARLIAEKLLNHKLTIATAESVTGGLLSSSLTDIAGASRFFKGAIVAYSNELKKSLLNV
CHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQSTLINHGAVSRYCVREMALGLMQKLNVDIAVACSGVAGPDALENQAVGSLFFCVIVAN
HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
KAYDFETKLPAGSRNELRQLFVQKILQTVEHILSEIS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYARLIAEKLLNHKLTIATAESVTGGLLSSSLTDIAGASRFFKGAIVAYSNELKKSLLNV
CHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQSTLINHGAVSRYCVREMALGLMQKLNVDIAVACSGVAGPDALENQAVGSLFFCVIVAN
HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
KAYDFETKLPAGSRNELRQLFVQKILQTVEHILSEIS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8948633; 10954595; 11271496