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The map label for this gene is ssb

Identifier: 13507968

GI number: 13507968

Start: 280430

End: 280930

Strand: Direct

Name: ssb

Synonym: MPN229

Alternate gene names: 13507968

Gene position: 280430-280930 (Clockwise)

Preceding gene: 13507967

Following gene: 13507969

Centisome position: 34.35

GC content: 41.32

Gene sequence:

>501_bases
ATGAACCGCGTTTTTTTATTTGGTAAGCTCTCGTTTGATCCTAATAAATTGCAAACCCGTACCAACAATATTGGCGCGTC
CTTTTCCTTAGCGTGCATTGATTCGAGCGGTTTTAATGACAGTAAGTCCTATATTAGGATTACTGCTTGGGGTAAAGTTG
CTAGCTTTGTTTTAACTTTAAAACCCGGTGACAGTGTTTTTGTGGAGGGGAGATTGTCCACTTACAAGATGAACAACCGC
AGTGATGATCCCAATTCGAAGGCCACTTACGCGCTCCAAGTTATCGCTGATAAGGTTTACCGTCCCGATGAGGAAAACAG
TTTAGAGCAACCTGTTGATAAGGCTACGGTAATTGATTCACCCTTTTTAGCAGCGAAAACCAATGCTACTGAAAATGAAT
TAGCCCAAGCATTTCCGATTAGTCTGGATGATGAAGATGATGACATTAACCCCATTTTAAACAACGATTCCCAACTAGAG
GAGGAGAGTGATGATGAATAA

Upstream 100 bases:

>100_bases
CGGAACACGTTAACCAACGGCAAAACCAACAAAACAATAACAATAACCGTTTTGACCGCAACCGCAACCGTCAGCACAAC
CGCTTTAAGGATAAGCAATA

Downstream 100 bases:

>100_bases
CGAACACGATAATTTCCAAAAAGAAGTTGAAACTACAACTGAAACAACCTTCAACAGAGAAGAAGGCAAAAGAATGGTAC
GTCCTTTATTTAAGCGTTCT

Product: single-stranded DNA binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MNRVFLFGKLSFDPNKLQTRTNNIGASFSLACIDSSGFNDSKSYIRITAWGKVASFVLTLKPGDSVFVEGRLSTYKMNNR
SDDPNSKATYALQVIADKVYRPDEENSLEQPVDKATVIDSPFLAAKTNATENELAQAFPISLDDEDDDINPILNNDSQLE
EESDDE

Sequences:

>Translated_166_residues
MNRVFLFGKLSFDPNKLQTRTNNIGASFSLACIDSSGFNDSKSYIRITAWGKVASFVLTLKPGDSVFVEGRLSTYKMNNR
SDDPNSKATYALQVIADKVYRPDEENSLEQPVDKATVIDSPFLAAKTNATENELAQAFPISLDDEDDDINPILNNDSQLE
EESDDE
>Mature_166_residues
MNRVFLFGKLSFDPNKLQTRTNNIGASFSLACIDSSGFNDSKSYIRITAWGKVASFVLTLKPGDSVFVEGRLSTYKMNNR
SDDPNSKATYALQVIADKVYRPDEENSLEQPVDKATVIDSPFLAAKTNATENELAQAFPISLDDEDDDINPILNNDSQLE
EESDDE

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SSB_MYCPN (P75542)

Other databases:

- EMBL:   U00089
- EMBL:   Z32660
- PIR:   S73928
- RefSeq:   NP_109917.1
- ProteinModelPortal:   P75542
- SMR:   P75542
- IntAct:   P75542
- GeneID:   877060
- GenomeReviews:   U00089_GR
- KEGG:   mpn:MPN229
- HOGENOM:   HBG130018
- OMA:   AWGKVAS
- ProtClustDB:   CLSK542142
- BioCyc:   MPNE272634:MPN229-MONOMER
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344
- Gene3D:   G3DSA:2.40.50.140
- TIGRFAMs:   TIGR00621

Pfam domain/function: PF00436 SSB; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 18424; Mature: 18424

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: PS50935 SSB; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRVFLFGKLSFDPNKLQTRTNNIGASFSLACIDSSGFNDSKSYIRITAWGKVASFVLTL
CCEEEEEEEECCCCHHHEEECCCCCCEEEEEEEECCCCCCCCCEEEEEECCCEEEEEEEE
KPGDSVFVEGRLSTYKMNNRSDDPNSKATYALQVIADKVYRPDEENSLEQPVDKATVIDS
CCCCCEEEECCEEEEEECCCCCCCCCCCEEHHEEEHHHHCCCCCCCCCCCCCCCEEECCC
PFLAAKTNATENELAQAFPISLDDEDDDINPILNNDSQLEEESDDE
CCEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNRVFLFGKLSFDPNKLQTRTNNIGASFSLACIDSSGFNDSKSYIRITAWGKVASFVLTL
CCEEEEEEEECCCCHHHEEECCCCCCEEEEEEEECCCCCCCCCEEEEEECCCEEEEEEEE
KPGDSVFVEGRLSTYKMNNRSDDPNSKATYALQVIADKVYRPDEENSLEQPVDKATVIDS
CCCCCEEEECCEEEEEECCCCCCCCCCCEEHHEEEHHHHCCCCCCCCCCCCCCCEEECCC
PFLAAKTNATENELAQAFPISLDDEDDDINPILNNDSQLEEESDDE
CCEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8948633; 7984111