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The map label for this gene is yyaF [C]

Identifier: 13507765

GI number: 13507765

Start: 31111

End: 32199

Strand: Direct

Name: yyaF [C]

Synonym: MPN026

Alternate gene names: 13507765

Gene position: 31111-32199 (Clockwise)

Preceding gene: 13507764

Following gene: 13507767

Centisome position: 3.81

GC content: 42.98

Gene sequence:

>1089_bases
ATGTTAAGTGCGGGAATTGTTGGTTTACCCAACGTTGGTAAATCAACCTTGTTTAGTGCTATTACCAACCTGCAAGTGGA
AATAGCTAACTATCCCTTTGCCACGATTGAACCGAATGCCGGGATAGTTAACGTAATCGATGAGCGCTTAGACAAACTAG
CGAGTTTAATTAAACCCGATAAGGTTACCCACACTACCTTTCGCTTTGTTGACATTGCTGGTTTAGTTAAGGGTGCCAGT
AAGGGAGAAGGACTGGGCAACCAGTTCTTGGCCAACATCAGAGAAGTTGACCTTATTTGTCACGTAGTGCGTTGCTATGA
GGACAAGAAGATTGTCCACGTTAATAACCAGGTCGATCCCGTATTTGACTTTGAAATTATTGTCAATGAGTTAATCCAGG
CCGACATTGAGGTGGTGAATACCCGGATTGGCAAGATTAAGCGCAAGGCCGAATCTGGTGATAAGCAGTCCAAGGAAGAA
TATCAACTGCTAGCACCCGTTTTACAAGGTTTGCAACAAAACCAGATGGTGTTGCATCTAGTGAATGAAGTAGATTTAAA
GAAACTCAAGTCACTTAATTTACTAACCGCCAAACCGATCCTAGTGGTGGCCAATGTGTCAGAAGCGGATTTGTCCAACC
TTGACCATAATCCCCACCTCACTCAGCTCAACCAGTTCTTAAAACAACATAACTTACCCCATGCCATTCCTGTTTGTGCA
TTATTAGAAAATGAGTTGAGTAGCTTGGATGCCAATGGTCGTCAAGACTGGCTCAAGGAGTTGGGTTTAAGTGATTACCA
AGGTTTAAACCAACTAATTAAAACGGCTTATGATGCGATTGGTCTGTGGTCATTCTTTACCTTTGGTAAGCAAGAAGTGC
GCGCTTGGGCTTTTAAAAAGGGTTGGTTAGCACCGCAGTGTGCGGGTGAAATTCACACTGACTTTGAACGTGGTTTTATT
AAAGTAGAAGTAATTAGTTGAAACCAACTATACGAATTAAAATCGCTCCAGGAAGCCAAAAAGCAGGGCCTGGTCCGTTT
AAGAGGGCAAGGCTTACGTGATGCAAGATGGTGATGTGTGTCACTTTAA

Upstream 100 bases:

>100_bases
GGGCTATGACCCACGGAAATTGTTAAAGTCACCTACCCAAGCAATTGTGGACTGCTGCTTGGAAAAGATGCAGCTCTGTG
GTTCAACCAATAAGGCTTAG

Downstream 100 bases:

>100_bases
GTTTAACGTTTAGCAAGTAACTGCTGAAACGAGTAAACAACCCAACTTTGCTTGTGGTTGTAACTAATACATAAACAACA
CAACTCATAGTTAAAAAAGA

Product: GTP-dependent nucleic acid-binding protein EngD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MLSAGIVGLPNVGKSTLFSAITNLQVEIANYPFATIEPNAGIVNVIDERLDKLASLIKPDKVTHTTFRFVDIAGLVKGAS
KGEGLGNQFLANIREVDLICHVVRCYEDKKIVHVNNQVDPVFDFEIIVNELIQADIEVVNTRIGKIKRKAESGDKQSKEE
YQLLAPVLQGLQQNQMVLHLVNEVDLKKLKSLNLLTAKPILVVANVSEADLSNLDHNPHLTQLNQFLKQHNLPHAIPVCA
LLENELSSLDANGRQDWLKELGLSDYQGLNQLIKTAYDAIGLWSFFTFGKQEVRAWAFKKGWLAPQCAGEIHTDFERGFI
KVEVISWNQLYELKSLQEAKKQGLVRLRGQGLRDARWWCVSL

Sequences:

>Translated_362_residues
MLSAGIVGLPNVGKSTLFSAITNLQVEIANYPFATIEPNAGIVNVIDERLDKLASLIKPDKVTHTTFRFVDIAGLVKGAS
KGEGLGNQFLANIREVDLICHVVRCYEDKKIVHVNNQVDPVFDFEIIVNELIQADIEVVNTRIGKIKRKAESGDKQSKEE
YQLLAPVLQGLQQNQMVLHLVNEVDLKKLKSLNLLTAKPILVVANVSEADLSNLDHNPHLTQLNQFLKQHNLPHAIPVCA
LLENELSSLDANGRQDWLKELGLSDYQGLNQLIKTAYDAIGLWSFFTFGKQEVRAWAFKKGWLAPQCAGEIHTDFERGFI
KVEVIS*NQLYELKSLQEAKKQGLVRLRGQGLRDARW*CVSL
>Mature_362_residues
MLSAGIVGLPNVGKSTLFSAITNLQVEIANYPFATIEPNAGIVNVIDERLDKLASLIKPDKVTHTTFRFVDIAGLVKGAS
KGEGLGNQFLANIREVDLICHVVRCYEDKKIVHVNNQVDPVFDFEIIVNELIQADIEVVNTRIGKIKRKAESGDKQSKEE
YQLLAPVLQGLQQNQMVLHLVNEVDLKKLKSLNLLTAKPILVVANVSEADLSNLDHNPHLTQLNQFLKQHNLPHAIPVCA
LLENELSSLDANGRQDWLKELGLSDYQGLNQLIKTAYDAIGLWSFFTFGKQEVRAWAFKKGWLAPQCAGEIHTDFERGFI
KVEVIS*NQLYELKSLQEAKKQGLVRLRGQGLRDARW*CVSL

Specific function: Unknown

COG id: COG0012

COG function: function code J; Predicted GTPase, probable translation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI58761500, Length=355, Percent_Identity=40.5633802816901, Blast_Score=233, Evalue=2e-61,
Organism=Homo sapiens, GI58761502, Length=203, Percent_Identity=34.4827586206897, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI24308117, Length=113, Percent_Identity=32.7433628318584, Blast_Score=70, Evalue=2e-12,
Organism=Escherichia coli, GI1787454, Length=350, Percent_Identity=45.7142857142857, Blast_Score=310, Evalue=1e-85,
Organism=Escherichia coli, GI1789574, Length=127, Percent_Identity=30.7086614173228, Blast_Score=74, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17509631, Length=352, Percent_Identity=38.6363636363636, Blast_Score=231, Evalue=6e-61,
Organism=Saccharomyces cerevisiae, GI6319499, Length=360, Percent_Identity=39.7222222222222, Blast_Score=214, Evalue=2e-56,
Organism=Saccharomyces cerevisiae, GI6321773, Length=363, Percent_Identity=34.1597796143251, Blast_Score=173, Evalue=4e-44,
Organism=Saccharomyces cerevisiae, GI6321649, Length=159, Percent_Identity=33.9622641509434, Blast_Score=77, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24640873, Length=354, Percent_Identity=38.7005649717514, Blast_Score=221, Evalue=5e-58,
Organism=Drosophila melanogaster, GI24640877, Length=354, Percent_Identity=38.7005649717514, Blast_Score=221, Evalue=5e-58,
Organism=Drosophila melanogaster, GI24640875, Length=354, Percent_Identity=38.7005649717514, Blast_Score=221, Evalue=5e-58,
Organism=Drosophila melanogaster, GI24640879, Length=313, Percent_Identity=36.741214057508, Blast_Score=177, Evalue=7e-45,
Organism=Drosophila melanogaster, GI24585318, Length=102, Percent_Identity=34.3137254901961, Blast_Score=68, Evalue=8e-12,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012675
- InterPro:   IPR004396
- InterPro:   IPR013029
- InterPro:   IPR006073
- InterPro:   IPR002917
- InterPro:   IPR012676
- InterPro:   IPR023192 [H]

Pfam domain/function: PF01926 MMR_HSR1; PF06071 YchF-GTPase_C [H]

EC number: NA

Molecular weight: Translated: 40199; Mature: 40199

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSAGIVGLPNVGKSTLFSAITNLQVEIANYPFATIEPNAGIVNVIDERLDKLASLIKPD
CCCCCCCCCCCCCHHHHHHHHHHCEEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHCCC
KVTHTTFRFVDIAGLVKGASKGEGLGNQFLANIREVDLICHVVRCYEDKKIVHVNNQVDP
CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC
VFDFEIIVNELIQADIEVVNTRIGKIKRKAESGDKQSKEEYQLLAPVLQGLQQNQMVLHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHH
VNEVDLKKLKSLNLLTAKPILVVANVSEADLSNLDHNPHLTQLNQFLKQHNLPHAIPVCA
HHHHHHHHHHHCCCEECCCEEEEECCCHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHH
LLENELSSLDANGRQDWLKELGLSDYQGLNQLIKTAYDAIGLWSFFTFGKQEVRAWAFKK
HHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHC
GWLAPQCAGEIHTDFERGFIKVEVISNQLYELKSLQEAKKQGLVRLRGQGLRDARWCVSL
CCCCCHHCCCHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHCCC
>Mature Secondary Structure
MLSAGIVGLPNVGKSTLFSAITNLQVEIANYPFATIEPNAGIVNVIDERLDKLASLIKPD
CCCCCCCCCCCCCHHHHHHHHHHCEEEEECCCEEEECCCCCHHHHHHHHHHHHHHHHCCC
KVTHTTFRFVDIAGLVKGASKGEGLGNQFLANIREVDLICHVVRCYEDKKIVHVNNQVDP
CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC
VFDFEIIVNELIQADIEVVNTRIGKIKRKAESGDKQSKEEYQLLAPVLQGLQQNQMVLHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHH
VNEVDLKKLKSLNLLTAKPILVVANVSEADLSNLDHNPHLTQLNQFLKQHNLPHAIPVCA
HHHHHHHHHHHCCCEECCCEEEEECCCHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHH
LLENELSSLDANGRQDWLKELGLSDYQGLNQLIKTAYDAIGLWSFFTFGKQEVRAWAFKK
HHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHC
GWLAPQCAGEIHTDFERGFIKVEVISNQLYELKSLQEAKKQGLVRLRGQGLRDARWCVSL
CCCCCHHCCCHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8948633 [H]