| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669860
Identifier: 15669860
GI number: 15669860
Start: 1646496
End: 1647176
Strand: Direct
Name: 15669860
Synonym: MJ1664
Alternate gene names: NA
Gene position: 1646496-1647176 (Clockwise)
Preceding gene: 15669859
Following gene: 15669871
Centisome position: 98.89
GC content: 25.26
Gene sequence:
>681_bases ATGAATAAATTAAAGCTAAAAAATGAGAAAGAGGTTAGGATTAAATTTGGGGAATATAAACTTACTGGGTTCTCTTCTGA TAATGGAAACAATCTTTACAAACTTTTTAATCTGACTCTATCAAAGATAAGATATAGAAAAGCCATGTTGGAGCATAATT TTCAGCTGCCTAAAATTAAAGAAAGCCATAAACCTAAAGAAATAACTGAAAAAATTAAAGAAAATGATATTTACTTTTTA GAGCTTATAAATGAAATAAAAAAGGATTTTAAAGATTTCTGCTCATTAGATGCTGGGACTCTATTTGAGTTATTTATGTA TTACACTCTCATAGAGTTCTTTAAAGAAAATAACATAGATGCAAAGGTTATTAGAAACTTGGATGTTAGCTATAAAGGAA ATATTTTTACAGAAATAGATTTATTTGTTGATGTTTTTGGAAAAAACTTTATTTTTGAATGTAAAAACAGACATATAAGC TCAAATGCCATTTTAAAGCTTTATGGTATTATGAAAATACTAAATATTAACTTTGGCGTTTTAGCTTCAACAAAGGGCTT CTATGGAAATTTAAAAAAGGAAGATATCTTTAAAGAATACAACATTTACATACTTGATAAATTGATTGAGAAAGAGAAGA ATAAGATTTTTAAAGAGCTAAAAGATATTTTTAATATTTAG
Upstream 100 bases:
>100_bases TTTATCTCATATTTAAATCCTTTATACATAAAAGCTGAAGAATTGGATGAGAGTAAGAGAATTTTCAAAAATATAAATAC AATAGAAGAGTTGATGGATA
Downstream 100 bases:
>100_bases TTAGTTAATGCCTGCAATGGGGCTGGGATTCTACCTCCTCTTTTAATAAACTTCTCAGATGAGTATTTATTAACTTCCAT AATTGGAGCTTTTCCTAACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MNKLKLKNEKEVRIKFGEYKLTGFSSDNGNNLYKLFNLTLSKIRYRKAMLEHNFQLPKIKESHKPKEITEKIKENDIYFL ELINEIKKDFKDFCSLDAGTLFELFMYYTLIEFFKENNIDAKVIRNLDVSYKGNIFTEIDLFVDVFGKNFIFECKNRHIS SNAILKLYGIMKILNINFGVLASTKGFYGNLKKEDIFKEYNIYILDKLIEKEKNKIFKELKDIFNI
Sequences:
>Translated_226_residues MNKLKLKNEKEVRIKFGEYKLTGFSSDNGNNLYKLFNLTLSKIRYRKAMLEHNFQLPKIKESHKPKEITEKIKENDIYFL ELINEIKKDFKDFCSLDAGTLFELFMYYTLIEFFKENNIDAKVIRNLDVSYKGNIFTEIDLFVDVFGKNFIFECKNRHIS SNAILKLYGIMKILNINFGVLASTKGFYGNLKKEDIFKEYNIYILDKLIEKEKNKIFKELKDIFNI >Mature_226_residues MNKLKLKNEKEVRIKFGEYKLTGFSSDNGNNLYKLFNLTLSKIRYRKAMLEHNFQLPKIKESHKPKEITEKIKENDIYFL ELINEIKKDFKDFCSLDAGTLFELFMYYTLIEFFKENNIDAKVIRNLDVSYKGNIFTEIDLFVDVFGKNFIFECKNRHIS SNAILKLYGIMKILNINFGVLASTKGFYGNLKKEDIFKEYNIYILDKLIEKEKNKIFKELKDIFNI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1664_METJA (Q59058)
Other databases:
- EMBL: L77117 - PIR: F64507 - RefSeq: NP_248674.1 - ProteinModelPortal: Q59058 - GeneID: 1452573 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1664 - NMPDR: fig|243232.1.peg.1711 - TIGR: MJ1664 - OMA: EYNIYIL - ProtClustDB: CLSK2517764 - BioCyc: MJAN243232:MJ_1664-MONOMER - InterPro: IPR011335
Pfam domain/function: SSF52980 Restrict_endonuc_II-like_core
EC number: NA
Molecular weight: Translated: 26893; Mature: 26893
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLKLKNEKEVRIKFGEYKLTGFSSDNGNNLYKLFNLTLSKIRYRKAMLEHNFQLPKIK CCCCCCCCCCEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC ESHKPKEITEKIKENDIYFLELINEIKKDFKDFCSLDAGTLFELFMYYTLIEFFKENNID CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC AKVIRNLDVSYKGNIFTEIDLFVDVFGKNFIFECKNRHISSNAILKLYGIMKILNINFGV HHHHHCCCCCCCCCEEHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCE LASTKGFYGNLKKEDIFKEYNIYILDKLIEKEKNKIFKELKDIFNI EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNKLKLKNEKEVRIKFGEYKLTGFSSDNGNNLYKLFNLTLSKIRYRKAMLEHNFQLPKIK CCCCCCCCCCEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC ESHKPKEITEKIKENDIYFLELINEIKKDFKDFCSLDAGTLFELFMYYTLIEFFKENNID CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCC AKVIRNLDVSYKGNIFTEIDLFVDVFGKNFIFECKNRHISSNAILKLYGIMKILNINFGV HHHHHCCCCCCCCCEEHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHCCCCE LASTKGFYGNLKKEDIFKEYNIYILDKLIEKEKNKIFKELKDIFNI EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087