| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669760
Identifier: 15669760
GI number: 15669760
Start: 1540693
End: 1542234
Strand: Direct
Name: 15669760
Synonym: MJ1565
Alternate gene names: NA
Gene position: 1540693-1542234 (Clockwise)
Preceding gene: 15669759
Following gene: 15669764
Centisome position: 92.54
GC content: 31.97
Gene sequence:
>1542_bases ATGGACAATAATGAGATTATTGGCTACACAATAGGAGAAACAAGGATTGATGAATTAACATTTTTGGCTAAAGAAGCCCC AAAAGTTGGGGATTATGTTAAAATAAATTATGACGACTCTGAATTATTGGGAATGGTTGAAAGCACAATCCAAGGAAACA TGGCTTTAGAGGATATTTTAAACATTGAGCATTTAGAGAAAATTAGGGAGTTTGAAGATAACTCATCCTACTACATTTTA GGAAAGATAAAGGTATTAGGAGATATTAGAGATTTAAATAAAGATGGAGCTTTAAAGTTGCCGAGAGTTCCACCAAAGCC AGGAATACCAATTTACAGAGCAGATGATGAGTTATTAAAAAAAGTTTTTGGTAATGGGCATTTAAAAATAGGGCATTTAG TTACAAGGGAAGATGTGGAGGTTAAATTAGACGCAAATAAATTATGTTCAAGACATTTGGCTATATTGGCAATGACTGGG ATGGGAAAGTCAAATACTGTAGCTGTTTTGTTAAGAGAGTTGAATAAGCTTAAAGCAACCGTTTTAGTTTTTGATATGCA TGGAGAATATAAAGATATTTACTGCGAAAGTGAAAAGCTAAGAGTTCATATAATTGAGCCGAAAATAAATATCTATAGGA TAAATGATGATGATTTGTGTGATTTGGCTGGCGTAGATGCCCAAGCAACAAAGCAAAGACCATATATAAGAAAGGCGATA AAAGAAATTAAAGAAGAACGTAAAGAACATGATTTCAGCACAGTTGATGATTATATAAATGCAATAATTGGGAAATTGGA AGAATACAAATCAAATGATAATTATAAAAAAGATGAAAGTAGTATTCAAACAGCCATATTTAGATTGGAAGATATGTTGC AGTTTAGAAAGAATATTATAACTCTTCACTATAATCCAATAAATGATATTAGGGAACATTATATCAACATAATTCCAATG GAAGAATTGGATGAGAATGCTGTGGATATTGTTGTTTCTTATATAGCTAAAGCAGTTTTGGATGATAGGAAGAGGATTAT TATTGATAAGGGAAGAGACTTTGCAAAACCAATATTTATGATTTTTGAAGAGGCACATTTAATAGCTCCACAACATAGAA AAACAAGGGCTAAGCATTATCTAAGCAGGATAGCAAGAGAGGGAAGAAAGTTTGGTGTTGGTTTATGCTTAGTTTCACAG AGACCTAAAACATTAGATGCTGAAACTTTATCTCAATGCTCTAATCTAATAATATCTAAGCTTATTGAACCAACAGACCA AAAACATGTCCAAATGGCTTCTGAAAATTTGAGTGAAGATTTAGTTAAACAATTAACAAGCTTAAACATTGGTGAGGCGA TAATTTTAGGACCGTGTATAAAAGTGCCAGCAATTGTTAAGGTAGATAAATTTGACGGAAGATATGGAGGAGAGGATTTA AATCTTGTTGAATTATGGGAAAAGGACTTTATAAATACTGAACGTTTAAAAACAGATGATATTGAAGAAAATGCCTTTGG AGATGATGATTTATTCTCCTAA
Upstream 100 bases:
>100_bases AGAGGAAGAAGAAAAAGAAGATAGTGAAGAGATTAAAGAAGGACATAAAGAAGAAAATAATTTAAAAATAAAGGTAATTG ATAATTCATCCGGTGATTAG
Downstream 100 bases:
>100_bases AACTTTCTTTTTTCTATACTCAATGACAATTTTCCCAACATAAACTCCAAGGATTGTAACGACTAATATTATCCAGAACT CCAATGGAAATCCAAGTATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 513; Mature: 513
Protein sequence:
>513_residues MDNNEIIGYTIGETRIDELTFLAKEAPKVGDYVKINYDDSELLGMVESTIQGNMALEDILNIEHLEKIREFEDNSSYYIL GKIKVLGDIRDLNKDGALKLPRVPPKPGIPIYRADDELLKKVFGNGHLKIGHLVTREDVEVKLDANKLCSRHLAILAMTG MGKSNTVAVLLRELNKLKATVLVFDMHGEYKDIYCESEKLRVHIIEPKINIYRINDDDLCDLAGVDAQATKQRPYIRKAI KEIKEERKEHDFSTVDDYINAIIGKLEEYKSNDNYKKDESSIQTAIFRLEDMLQFRKNIITLHYNPINDIREHYINIIPM EELDENAVDIVVSYIAKAVLDDRKRIIIDKGRDFAKPIFMIFEEAHLIAPQHRKTRAKHYLSRIAREGRKFGVGLCLVSQ RPKTLDAETLSQCSNLIISKLIEPTDQKHVQMASENLSEDLVKQLTSLNIGEAIILGPCIKVPAIVKVDKFDGRYGGEDL NLVELWEKDFINTERLKTDDIEENAFGDDDLFS
Sequences:
>Translated_513_residues MDNNEIIGYTIGETRIDELTFLAKEAPKVGDYVKINYDDSELLGMVESTIQGNMALEDILNIEHLEKIREFEDNSSYYIL GKIKVLGDIRDLNKDGALKLPRVPPKPGIPIYRADDELLKKVFGNGHLKIGHLVTREDVEVKLDANKLCSRHLAILAMTG MGKSNTVAVLLRELNKLKATVLVFDMHGEYKDIYCESEKLRVHIIEPKINIYRINDDDLCDLAGVDAQATKQRPYIRKAI KEIKEERKEHDFSTVDDYINAIIGKLEEYKSNDNYKKDESSIQTAIFRLEDMLQFRKNIITLHYNPINDIREHYINIIPM EELDENAVDIVVSYIAKAVLDDRKRIIIDKGRDFAKPIFMIFEEAHLIAPQHRKTRAKHYLSRIAREGRKFGVGLCLVSQ RPKTLDAETLSQCSNLIISKLIEPTDQKHVQMASENLSEDLVKQLTSLNIGEAIILGPCIKVPAIVKVDKFDGRYGGEDL NLVELWEKDFINTERLKTDDIEENAFGDDDLFS >Mature_513_residues MDNNEIIGYTIGETRIDELTFLAKEAPKVGDYVKINYDDSELLGMVESTIQGNMALEDILNIEHLEKIREFEDNSSYYIL GKIKVLGDIRDLNKDGALKLPRVPPKPGIPIYRADDELLKKVFGNGHLKIGHLVTREDVEVKLDANKLCSRHLAILAMTG MGKSNTVAVLLRELNKLKATVLVFDMHGEYKDIYCESEKLRVHIIEPKINIYRINDDDLCDLAGVDAQATKQRPYIRKAI KEIKEERKEHDFSTVDDYINAIIGKLEEYKSNDNYKKDESSIQTAIFRLEDMLQFRKNIITLHYNPINDIREHYINIIPM EELDENAVDIVVSYIAKAVLDDRKRIIIDKGRDFAKPIFMIFEEAHLIAPQHRKTRAKHYLSRIAREGRKFGVGLCLVSQ RPKTLDAETLSQCSNLIISKLIEPTDQKHVQMASENLSEDLVKQLTSLNIGEAIILGPCIKVPAIVKVDKFDGRYGGEDL NLVELWEKDFINTERLKTDDIEENAFGDDDLFS
Specific function: Unknown
COG id: COG0433
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJECL08 and MJ1429
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1565_METJA (Q58960)
Other databases:
- EMBL: L77117 - PIR: D64495 - RefSeq: NP_248573.1 - ProteinModelPortal: Q58960 - GeneID: 1452473 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1565 - NMPDR: fig|243232.1.peg.1610 - TIGR: MJ1565 - HOGENOM: HBG512960 - OMA: CLVSQRP - ProtClustDB: CLSK876622 - BioCyc: MJAN243232:MJ_1565-MONOMER - InterPro: IPR008571 - InterPro: IPR002789 - InterPro: IPR018538
Pfam domain/function: PF05872 DUF853; PF01935 DUF87; PF09378 HAS-barrel
EC number: NA
Molecular weight: Translated: 58673; Mature: 58673
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNNEIIGYTIGETRIDELTFLAKEAPKVGDYVKINYDDSELLGMVESTIQGNMALEDIL CCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHH NIEHLEKIREFEDNSSYYILGKIKVLGDIRDLNKDGALKLPRVPPKPGIPIYRADDELLK CHHHHHHHHHHCCCCCEEEEEEEEEEEHHHHCCCCCCEECCCCCCCCCCCEEECCHHHHH KVFGNGHLKIGHLVTREDVEVKLDANKLCSRHLAILAMTGMGKSNTVAVLLRELNKLKAT HHHCCCCEEEEEEEECCCCEEEECHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHEEE VLVFDMHGEYKDIYCESEKLRVHIIEPKINIYRINDDDLCDLAGVDAQATKQRPYIRKAI EEEEECCCCCCCEEECCCCEEEEEECCCEEEEEECCCCCHHHCCCCCHHHCCCHHHHHHH KEIKEERKEHDFSTVDDYINAIIGKLEEYKSNDNYKKDESSIQTAIFRLEDMLQFRKNII HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEE TLHYNPINDIREHYINIIPMEELDENAVDIVVSYIAKAVLDDRKRIIIDKGRDFAKPIFM EEEECCHHHHHHHHEEECCHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHH IFEEAHLIAPQHRKTRAKHYLSRIAREGRKFGVGLCLVSQRPKTLDAETLSQCSNLIISK HHHHHHHCCCCHHHHHHHHHHHHHHHCCHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHH LIEPTDQKHVQMASENLSEDLVKQLTSLNIGEAIILGPCIKVPAIVKVDKFDGRYGGEDL HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEECCCCCCCCCCC NLVELWEKDFINTERLKTDDIEENAFGDDDLFS CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDNNEIIGYTIGETRIDELTFLAKEAPKVGDYVKINYDDSELLGMVESTIQGNMALEDIL CCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHCCCHHHHHHH NIEHLEKIREFEDNSSYYILGKIKVLGDIRDLNKDGALKLPRVPPKPGIPIYRADDELLK CHHHHHHHHHHCCCCCEEEEEEEEEEEHHHHCCCCCCEECCCCCCCCCCCEEECCHHHHH KVFGNGHLKIGHLVTREDVEVKLDANKLCSRHLAILAMTGMGKSNTVAVLLRELNKLKAT HHHCCCCEEEEEEEECCCCEEEECHHHHHHHHEEEEEEECCCCCCHHHHHHHHHHHHEEE VLVFDMHGEYKDIYCESEKLRVHIIEPKINIYRINDDDLCDLAGVDAQATKQRPYIRKAI EEEEECCCCCCCEEECCCCEEEEEECCCEEEEEECCCCCHHHCCCCCHHHCCCHHHHHHH KEIKEERKEHDFSTVDDYINAIIGKLEEYKSNDNYKKDESSIQTAIFRLEDMLQFRKNII HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEE TLHYNPINDIREHYINIIPMEELDENAVDIVVSYIAKAVLDDRKRIIIDKGRDFAKPIFM EEEECCHHHHHHHHEEECCHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHH IFEEAHLIAPQHRKTRAKHYLSRIAREGRKFGVGLCLVSQRPKTLDAETLSQCSNLIISK HHHHHHHCCCCHHHHHHHHHHHHHHHCCHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHH LIEPTDQKHVQMASENLSEDLVKQLTSLNIGEAIILGPCIKVPAIVKVDKFDGRYGGEDL HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEECCCCCCCCCCC NLVELWEKDFINTERLKTDDIEENAFGDDDLFS CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087