Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

Click here to switch to the map view.

The map label for this gene is 15669764

Identifier: 15669764

GI number: 15669764

Start: 1544966

End: 1545634

Strand: Direct

Name: 15669764

Synonym: MJ1569

Alternate gene names: NA

Gene position: 1544966-1545634 (Clockwise)

Preceding gene: 15669760

Following gene: 15669765

Centisome position: 92.79

GC content: 38.71

Gene sequence:

>669_bases
ATGCACATACCAGATGGCTACCTTGGCCCAATAACATGTGCTTTCTTCTATTTGATAATGATACCAATTTGGTATAAGAG
TATTAAAGAGCTTAAAAAGTTAGACCCAAGAAAGTTGCCATTGTTGGGAGTTTTAACAGCTTTCTCTTTCTTAGTTATGA
TGTTCAACCTTCCAGTTCCAGATGGAACAACAGCTCACATGGTTGGAGGGACATTGATAGCAATATTGATGGATAATCCA
TGGGTTGCGACGATAGCAATATCTATTGTTTTAATTATACAGGCAATATTCTTTGGAGATGGGGGAATAACTTGTATTGG
AGCAAACTGCTTCAATATGGGTGTTGTGTTACCGTTTGTTGGTTATTATGTTTATAAATTCTTAAGAGATAAGGTTGGAG
AAGTAATTGCAAGTGGTATTGGGGCTTATGTTGGAATTGTTGCAGCAGCAATTGTTGCAGGCTTTGAGTTTGGATTACAG
CCATTTATAGAGCCAGGTTATTGTCCATACCCTTTCACCGTCTCAGTTCCAGCAATGGCATTTGCTCACTTGATAACAGC
AGGACCTGCAGCAGCGGTAGTAACTGCAATAGTTGTTTGGTATGTAAAGAAAGTAAGACCTGATTTATTCACATCAAAAG
AACAGCAAGTTAGTGGGGTGAATGCATGA

Upstream 100 bases:

>100_bases
CAAGACATTTTTAATAAACTTTAAACAAAAAAGTTTAAATAGTATTATCAACATTAGATATGATGATAACACAATTAAAT
AATACCAAAAGGGTGAAACT

Downstream 100 bases:

>100_bases
ATTGGCAAGACCCCTTAGTTAAAAAGTTTCTCTATTTAATTGTAGCTATGGTAATTCTCTGTCCTCTTGGAATATTGTTA
GTTTGGAATTATGGAGATGC

Product: cobalt transport protein CbiM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MHIPDGYLGPITCAFFYLIMIPIWYKSIKELKKLDPRKLPLLGVLTAFSFLVMMFNLPVPDGTTAHMVGGTLIAILMDNP
WVATIAISIVLIIQAIFFGDGGITCIGANCFNMGVVLPFVGYYVYKFLRDKVGEVIASGIGAYVGIVAAAIVAGFEFGLQ
PFIEPGYCPYPFTVSVPAMAFAHLITAGPAAAVVTAIVVWYVKKVRPDLFTSKEQQVSGVNA

Sequences:

>Translated_222_residues
MHIPDGYLGPITCAFFYLIMIPIWYKSIKELKKLDPRKLPLLGVLTAFSFLVMMFNLPVPDGTTAHMVGGTLIAILMDNP
WVATIAISIVLIIQAIFFGDGGITCIGANCFNMGVVLPFVGYYVYKFLRDKVGEVIASGIGAYVGIVAAAIVAGFEFGLQ
PFIEPGYCPYPFTVSVPAMAFAHLITAGPAAAVVTAIVVWYVKKVRPDLFTSKEQQVSGVNA
>Mature_222_residues
MHIPDGYLGPITCAFFYLIMIPIWYKSIKELKKLDPRKLPLLGVLTAFSFLVMMFNLPVPDGTTAHMVGGTLIAILMDNP
WVATIAISIVLIIQAIFFGDGGITCIGANCFNMGVVLPFVGYYVYKFLRDKVGEVIASGIGAYVGIVAAAIVAGFEFGLQ
PFIEPGYCPYPFTVSVPAMAFAHLITAGPAAAVVTAIVVWYVKKVRPDLFTSKEQQVSGVNA

Specific function: Unknown

COG id: COG0310

COG function: function code P; ABC-type Co2+ transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1569_METJA (Q58964)

Other databases:

- EMBL:   L77117
- PIR:   H64495
- RefSeq:   NP_248577.1
- ProteinModelPortal:   Q58964
- GeneID:   1452477
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1569
- NMPDR:   fig|243232.1.peg.1614
- TIGR:   MJ1569
- HOGENOM:   HBG662717
- OMA:   MFNLPVP
- ProtClustDB:   PRK11909
- BioCyc:   MJAN243232:MJ_1569-MONOMER
- InterPro:   IPR002751

Pfam domain/function: PF01891 CbiM

EC number: NA

Molecular weight: Translated: 23948; Mature: 23948

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xb8037c8)-; HASH(0xb7e7c80)-; HASH(0xef23e54)-; HASH(0xb7dc28c)-; HASH(0xed8aa0c)-; HASH(0xef30b5c)-;

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIPDGYLGPITCAFFYLIMIPIWYKSIKELKKLDPRKLPLLGVLTAFSFLVMMFNLPVP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC
DGTTAHMVGGTLIAILMDNPWVATIAISIVLIIQAIFFGDGGITCIGANCFNMGVVLPFV
CCCHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHH
GYYVYKFLRDKVGEVIASGIGAYVGIVAAAIVAGFEFGLQPFIEPGYCPYPFTVSVPAMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECHHHHH
FAHLITAGPAAAVVTAIVVWYVKKVRPDLFTSKEQQVSGVNA
HHHHHHCCHHHHHHHHHHHHHHHHHCHHHHCCCHHHHCCCCH
>Mature Secondary Structure
MHIPDGYLGPITCAFFYLIMIPIWYKSIKELKKLDPRKLPLLGVLTAFSFLVMMFNLPVP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC
DGTTAHMVGGTLIAILMDNPWVATIAISIVLIIQAIFFGDGGITCIGANCFNMGVVLPFV
CCCHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHH
GYYVYKFLRDKVGEVIASGIGAYVGIVAAAIVAGFEFGLQPFIEPGYCPYPFTVSVPAMA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECHHHHH
FAHLITAGPAAAVVTAIVVWYVKKVRPDLFTSKEQQVSGVNA
HHHHHHCCHHHHHHHHHHHHHHHHHCHHHHCCCHHHHCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087