| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669749
Identifier: 15669749
GI number: 15669749
Start: 1529321
End: 1531189
Strand: Direct
Name: 15669749
Synonym: MJ1554
Alternate gene names: NA
Gene position: 1529321-1531189 (Clockwise)
Preceding gene: 15669748
Following gene: 15669750
Centisome position: 91.85
GC content: 29.91
Gene sequence:
>1869_bases ATGAAAATTAAGGCAGTTGCAATATTTTTATCATTATTAATGATTATATCATTATTTTCTGGATGCGTTGAAAATGAAAA GCCTATAAAAGAAGGAAGTAATGATTTCAAATTAATTCCTGTTAATTCCAAATCAAATTTTGAAGAATTTAAAAATACCG TTGAAAATTCAATAGGAAACTACATCTACGTTGGACATAGTTATGCAAGTAGAGAAGTGCAGATAACCTCAACTGTTAAA TCTTCTAATGTAGAAACCTCAACTGAGCCAGAAAGATTTTCAAAAACCAATGTTCAAGTTAAAGGAGTTGATGAAGCAGA TATATTAAAAACAAATGGGAACATTATTGCCTTCTCTCAAAATAAGATTTATTTAATTAAGCCCCTTCCTCCAAAATATG CTAAAATAATAAAAAACATATCTGAATGTGGTTATCTTTACTTAACAAACAATACACTAATAGTTATAAGTTGGAATAAA ATAACCTCCTATAATGTCTCAAATCCAGAAATGCCAAAAATAATTTGGCAAATGGATTTAAATGGAAGTTATGTTGATTC AAGGTTGTATAATGGAACGTTATATTTAGTAGTTAGAAAAAACTCTATAGATTGCCCAATTGTATGGAACAATTATAAAA TTGGCTATGATAAATACTACATTCCAGAACTTCCCCCAATATACAGTATGGACTTTGATACAACATATATTATTAGCAGA ATAAATATAAAAAGTGGAAAAGTTGAAAACTCAATTGCAATTGTTGGAAATTATAAAACAACCCTATACATGTCAAAGAA CAACTTATACTTTGCCTATAATCTAAAAATTAATGAGAAGAAATTAATGCTTAACTTTTTAAATGAAAGTGCAGATAAAT ACTTCCCAACAGAAGTGGCAGATAAAATAAAGAGAGTTATTGAAAATGAAGACTTTGGAGACAATGCCAAGTTCGTTGAG ATAACTGAAACTATTGAAAGATATTTAAGCTCCCTTCCTTCTGAGAAGAGACACAACCTAATGAAAAAGTTGCAGAATGA CTTTGAGAACTATTTAGAAGAACACTGGGAAGAGTTTGAATACACTGGAATAGCTAAAATTAACTTAGACAGCTTTGAAG TTAAAAGTGGAAAGGTTAGTGGTCATCTCTTAAACAACTTTGCTATGGATGAATACAACGGCTATTTAAGAGTGGCAACA ACAATAGGGGACTGGAGATTCAGAGATAAAATGACCAATAACATCTACATCTTAGATAGTGATTTAAATGTTGTTGGTAA GCTAACTGGATTAGAAAAAGGAGAGAGAATTTATGCAGTAAGATTCATGGGAGATAAAGCCTATATAGTAACTTACAAAG AGACAGACCCGTTATTGGTTATTGATTTAAAAAATCCAAAAAATCCAAAGGTCTTAGGAGAGTTAAAGATTCCAGGATAT TCCACTTACTTACATCCAATAGGTAATAATTTATTTATTGGTATTGGTAAAGATGACGATGGAAAATTAAAAATCTCACT ATTTAATATTTCTGATTTGAATAATCCGAAAGAAGTTGATAAATATAAATTAAATGTTTGGTGGAGTCCAGCGTTTAGGG ACTATCACGCATTCTTATGGGATGAAAAGTATAAAATCTTCTTTCTACCTGCTTATAATCATGCTTATGTGTTTAAAGTT GAGGACAATAAGATAGAAATGGTTAAGGACGATGAGCATAAAACAAATGTTTTGAGGGCTTTATTTATAAACAATTATCT ATACACGTTCTCACTTTCAGAGATGCACATTTTAGATGAAAATAACTGGCAATTAGTTAAAAAAATTGAGTTTGAAAACT ATCTGCCTTATGGCTATGGGTTTAAATAA
Upstream 100 bases:
>100_bases AAAATTATTCGGAGATAACCGAACGATTTAGAAATCATTATATAGTATCTTTTTTAGATATATAAATGAATTAGCTTTTT AAATATTCTTAGGTGATATA
Downstream 100 bases:
>100_bases ATTTAATTTTTTAATTATTTTTTATTTTTGACAATTTTAACCTATAAAATTAAATATATAGATACACAAAAGCTTAGGAA ACTATAAAAACCATTTACAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 622; Mature: 622
Protein sequence:
>622_residues MKIKAVAIFLSLLMIISLFSGCVENEKPIKEGSNDFKLIPVNSKSNFEEFKNTVENSIGNYIYVGHSYASREVQITSTVK SSNVETSTEPERFSKTNVQVKGVDEADILKTNGNIIAFSQNKIYLIKPLPPKYAKIIKNISECGYLYLTNNTLIVISWNK ITSYNVSNPEMPKIIWQMDLNGSYVDSRLYNGTLYLVVRKNSIDCPIVWNNYKIGYDKYYIPELPPIYSMDFDTTYIISR INIKSGKVENSIAIVGNYKTTLYMSKNNLYFAYNLKINEKKLMLNFLNESADKYFPTEVADKIKRVIENEDFGDNAKFVE ITETIERYLSSLPSEKRHNLMKKLQNDFENYLEEHWEEFEYTGIAKINLDSFEVKSGKVSGHLLNNFAMDEYNGYLRVAT TIGDWRFRDKMTNNIYILDSDLNVVGKLTGLEKGERIYAVRFMGDKAYIVTYKETDPLLVIDLKNPKNPKVLGELKIPGY STYLHPIGNNLFIGIGKDDDGKLKISLFNISDLNNPKEVDKYKLNVWWSPAFRDYHAFLWDEKYKIFFLPAYNHAYVFKV EDNKIEMVKDDEHKTNVLRALFINNYLYTFSLSEMHILDENNWQLVKKIEFENYLPYGYGFK
Sequences:
>Translated_622_residues MKIKAVAIFLSLLMIISLFSGCVENEKPIKEGSNDFKLIPVNSKSNFEEFKNTVENSIGNYIYVGHSYASREVQITSTVK SSNVETSTEPERFSKTNVQVKGVDEADILKTNGNIIAFSQNKIYLIKPLPPKYAKIIKNISECGYLYLTNNTLIVISWNK ITSYNVSNPEMPKIIWQMDLNGSYVDSRLYNGTLYLVVRKNSIDCPIVWNNYKIGYDKYYIPELPPIYSMDFDTTYIISR INIKSGKVENSIAIVGNYKTTLYMSKNNLYFAYNLKINEKKLMLNFLNESADKYFPTEVADKIKRVIENEDFGDNAKFVE ITETIERYLSSLPSEKRHNLMKKLQNDFENYLEEHWEEFEYTGIAKINLDSFEVKSGKVSGHLLNNFAMDEYNGYLRVAT TIGDWRFRDKMTNNIYILDSDLNVVGKLTGLEKGERIYAVRFMGDKAYIVTYKETDPLLVIDLKNPKNPKVLGELKIPGY STYLHPIGNNLFIGIGKDDDGKLKISLFNISDLNNPKEVDKYKLNVWWSPAFRDYHAFLWDEKYKIFFLPAYNHAYVFKV EDNKIEMVKDDEHKTNVLRALFINNYLYTFSLSEMHILDENNWQLVKKIEFENYLPYGYGFK >Mature_622_residues MKIKAVAIFLSLLMIISLFSGCVENEKPIKEGSNDFKLIPVNSKSNFEEFKNTVENSIGNYIYVGHSYASREVQITSTVK SSNVETSTEPERFSKTNVQVKGVDEADILKTNGNIIAFSQNKIYLIKPLPPKYAKIIKNISECGYLYLTNNTLIVISWNK ITSYNVSNPEMPKIIWQMDLNGSYVDSRLYNGTLYLVVRKNSIDCPIVWNNYKIGYDKYYIPELPPIYSMDFDTTYIISR INIKSGKVENSIAIVGNYKTTLYMSKNNLYFAYNLKINEKKLMLNFLNESADKYFPTEVADKIKRVIENEDFGDNAKFVE ITETIERYLSSLPSEKRHNLMKKLQNDFENYLEEHWEEFEYTGIAKINLDSFEVKSGKVSGHLLNNFAMDEYNGYLRVAT TIGDWRFRDKMTNNIYILDSDLNVVGKLTGLEKGERIYAVRFMGDKAYIVTYKETDPLLVIDLKNPKNPKVLGELKIPGY STYLHPIGNNLFIGIGKDDDGKLKISLFNISDLNNPKEVDKYKLNVWWSPAFRDYHAFLWDEKYKIFFLPAYNHAYVFKV EDNKIEMVKDDEHKTNVLRALFINNYLYTFSLSEMHILDENNWQLVKKIEFENYLPYGYGFK
Specific function: Unknown
COG id: COG4880
COG function: function code R; Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1554_METJA (Q58949)
Other databases:
- EMBL: L77117 - PIR: A64494 - RefSeq: NP_248562.1 - ProteinModelPortal: Q58949 - GeneID: 1452462 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1554 - NMPDR: fig|243232.1.peg.1599 - TIGR: MJ1554 - HOGENOM: HBG545965 - OMA: TYLHPIG - ProtClustDB: CLSK2750011 - BioCyc: MJAN243232:MJ_1554-MONOMER - InterPro: IPR011042 - InterPro: IPR019198 - InterPro: IPR014441 - Gene3D: G3DSA:2.120.10.30 - PIRSF: PIRSF006425
Pfam domain/function: PF09826 Beta_propel
EC number: NA
Molecular weight: Translated: 72283; Mature: 72283
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKAVAIFLSLLMIISLFSGCVENEKPIKEGSNDFKLIPVNSKSNFEEFKNTVENSIGN CEEHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCC YIYVGHSYASREVQITSTVKSSNVETSTEPERFSKTNVQVKGVDEADILKTNGNIIAFSQ EEEEECCCCCCEEEEEEEEECCCCCCCCCCCHHCCCCEEEECCCCHHEEEECCCEEEEEC NKIYLIKPLPPKYAKIIKNISECGYLYLTNNTLIVISWNKITSYNVSNPEMPKIIWQMDL CCEEEECCCCHHHHHHHHHHHHCCEEEEECCEEEEEEECCEEEECCCCCCCCEEEEEEEC NGSYVDSRLYNGTLYLVVRKNSIDCPIVWNNYKIGYDKYYIPELPPIYSMDFDTTYIISR CCCEECCEEECCEEEEEEECCCCCCCEEECCEEECCCEEECCCCCCCEECCCCCEEEEEE INIKSGKVENSIAIVGNYKTTLYMSKNNLYFAYNLKINEKKLMLNFLNESADKYFPTEVA EEECCCCCCCEEEEEECCEEEEEEECCCEEEEEEEEECCHHHHHHHHHCCCCCCCCHHHH DKIKRVIENEDFGDNAKFVEITETIERYLSSLPSEKRHNLMKKLQNDFENYLEEHWEEFE HHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC YTGIAKINLDSFEVKSGKVSGHLLNNFAMDEYNGYLRVATTIGDWRFRDKMTNNIYILDS CCEEEEEECCCEEECCCCCCEEEECCEECCCCCCEEEEEEEECCEEECCCCCCCEEEEEC DLNVVGKLTGLEKGERIYAVRFMGDKAYIVTYKETDPLLVIDLKNPKNPKVLGELKIPGY CCCEEEEECCCCCCCEEEEEEEECCEEEEEEEECCCCEEEEECCCCCCCCEEEEEECCCC STYLHPIGNNLFIGIGKDDDGKLKISLFNISDLNNPKEVDKYKLNVWWSPAFRDYHAFLW EEEEEECCCEEEEEECCCCCCEEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCEEEEEE DEKYKIFFLPAYNHAYVFKVEDNKIEMVKDDEHKTNVLRALFINNYLYTFSLSEMHILDE CCCEEEEEEECCCCEEEEEEECCEEEEEECCCHHHHHHHHHECCCEEEEEEECEEEEEEC NNWQLVKKIEFENYLPYGYGFK CCCEEEEEEECCCCCCCCCCCC >Mature Secondary Structure MKIKAVAIFLSLLMIISLFSGCVENEKPIKEGSNDFKLIPVNSKSNFEEFKNTVENSIGN CEEHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCC YIYVGHSYASREVQITSTVKSSNVETSTEPERFSKTNVQVKGVDEADILKTNGNIIAFSQ EEEEECCCCCCEEEEEEEEECCCCCCCCCCCHHCCCCEEEECCCCHHEEEECCCEEEEEC NKIYLIKPLPPKYAKIIKNISECGYLYLTNNTLIVISWNKITSYNVSNPEMPKIIWQMDL CCEEEECCCCHHHHHHHHHHHHCCEEEEECCEEEEEEECCEEEECCCCCCCCEEEEEEEC NGSYVDSRLYNGTLYLVVRKNSIDCPIVWNNYKIGYDKYYIPELPPIYSMDFDTTYIISR CCCEECCEEECCEEEEEEECCCCCCCEEECCEEECCCEEECCCCCCCEECCCCCEEEEEE INIKSGKVENSIAIVGNYKTTLYMSKNNLYFAYNLKINEKKLMLNFLNESADKYFPTEVA EEECCCCCCCEEEEEECCEEEEEEECCCEEEEEEEEECCHHHHHHHHHCCCCCCCCHHHH DKIKRVIENEDFGDNAKFVEITETIERYLSSLPSEKRHNLMKKLQNDFENYLEEHWEEFE HHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC YTGIAKINLDSFEVKSGKVSGHLLNNFAMDEYNGYLRVATTIGDWRFRDKMTNNIYILDS CCEEEEEECCCEEECCCCCCEEEECCEECCCCCCEEEEEEEECCEEECCCCCCCEEEEEC DLNVVGKLTGLEKGERIYAVRFMGDKAYIVTYKETDPLLVIDLKNPKNPKVLGELKIPGY CCCEEEEECCCCCCCEEEEEEEECCEEEEEEEECCCCEEEEECCCCCCCCEEEEEECCCC STYLHPIGNNLFIGIGKDDDGKLKISLFNISDLNNPKEVDKYKLNVWWSPAFRDYHAFLW EEEEEECCCEEEEEECCCCCCEEEEEEEEECCCCCCCCCCEEEEEEEECCCCCCEEEEEE DEKYKIFFLPAYNHAYVFKVEDNKIEMVKDDEHKTNVLRALFINNYLYTFSLSEMHILDE CCCEEEEEEECCCCEEEEEEECCEEEEEECCCHHHHHHHHHECCCEEEEEEECEEEEEEC NNWQLVKKIEFENYLPYGYGFK CCCEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087