| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669707
Identifier: 15669707
GI number: 15669707
Start: 1488598
End: 1489605
Strand: Reverse
Name: 15669707
Synonym: MJ1513
Alternate gene names: NA
Gene position: 1489605-1488598 (Counterclockwise)
Preceding gene: 15669711
Following gene: 15669704
Centisome position: 89.47
GC content: 30.85
Gene sequence:
>1008_bases GTGAGTAAAATGACAAATGATTTAGAGAAAATAAGAGGTGGAGTTCATATAGCAGTTCAAGGTTATGAAGTAGATAGAAT TACAGAAGTTCCAATAATGAGGAGGGCTGAAAAAGTTTATTTAATTTGCAAACCTGGAAATAATGATTCAAAACGAGGAA AAGCATTTAAAAATGTTATTATTAAAAAGTTTGAAGAAAAGCGGGTTAATTATGAGATTGTAGAGGCAGATTTGTTTGAT TTAGATGATATTGTTAAAAAGATGAAGTTAATTATAGCTCATGAGAGAAAAGAATTTGGAGATGTTAAATTCTATATTAA CGTATCTTCTGGCTCTACAATTGGGTGTATTGCTGGCATAACCTGTGCAATGATATTAAATAAGGAAAATTCAAGGATTA TTCCATATTATGTAATGCCAGAGAAATCTTTAGATGGCCTCTCTGAAAAAGAAAAGGAAGAATTAAAAAAAGAATATGAA AGTAAATATAACTGCCCTTATTTGCCAAGAAGTTTTGGCGTTAGAGGTGTTAAGCTAATCTATCCATTTGAAGTAACTTT GCCAAGGGAAGAGTTGCTAATATTTTTGAAGTTCATTGGCAGGGCTGGAAATAGAGGATTAACTATAAAAGAACTTAGTA TTTTAACAAAAGAAGAGTTTTTAAACGTGGATTTAAATGATAATGAGAGTATAAAAGAGTTAATTAAAGCAGTGGAGAGA AAGGAATCTGTTAGCAACTCATCTGTTAAAAAAATGAAGAATTTAGTTAGAGAGTTAAAGGAGGTCGTTGGGAGTGATGT TGATGATTTGAAGAAGATTATTACTTGGAGGAAAAAGTGTAGGAGTTCAGTTAGTTCTACTGGGCAGAGTGATTTGGTTT GGGTTAATAAAAATGTTGTTGAAAAACTCTTAGAATTGGAATTGATAGAAAAACCAGAAAAAATAGGTAAGTCAAAATAT ATAAGAATAAGTGAAAAAGGGAAAATGCTACTGAACTACGTTGGATAA
Upstream 100 bases:
>100_bases AACTTTGGTTTTGTAATGCTCATGAATAATTTAATATGAGAGAGTATAAATAATACTTACTATCTTAGTAACCTTAATGT AGTTACTGTCCTTACTAAAG
Downstream 100 bases:
>100_bases TTCACTATCTTATACTCAAAATCTCCTCATGTAAAGCTTTTAGCACTTCTATGTAATCAACTTCTCCATTTTCAATCTTA TCCATAATCTCCTCCAACTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MSKMTNDLEKIRGGVHIAVQGYEVDRITEVPIMRRAEKVYLICKPGNNDSKRGKAFKNVIIKKFEEKRVNYEIVEADLFD LDDIVKKMKLIIAHERKEFGDVKFYINVSSGSTIGCIAGITCAMILNKENSRIIPYYVMPEKSLDGLSEKEKEELKKEYE SKYNCPYLPRSFGVRGVKLIYPFEVTLPREELLIFLKFIGRAGNRGLTIKELSILTKEEFLNVDLNDNESIKELIKAVER KESVSNSSVKKMKNLVRELKEVVGSDVDDLKKIITWRKKCRSSVSSTGQSDLVWVNKNVVEKLLELELIEKPEKIGKSKY IRISEKGKMLLNYVG
Sequences:
>Translated_335_residues MSKMTNDLEKIRGGVHIAVQGYEVDRITEVPIMRRAEKVYLICKPGNNDSKRGKAFKNVIIKKFEEKRVNYEIVEADLFD LDDIVKKMKLIIAHERKEFGDVKFYINVSSGSTIGCIAGITCAMILNKENSRIIPYYVMPEKSLDGLSEKEKEELKKEYE SKYNCPYLPRSFGVRGVKLIYPFEVTLPREELLIFLKFIGRAGNRGLTIKELSILTKEEFLNVDLNDNESIKELIKAVER KESVSNSSVKKMKNLVRELKEVVGSDVDDLKKIITWRKKCRSSVSSTGQSDLVWVNKNVVEKLLELELIEKPEKIGKSKY IRISEKGKMLLNYVG >Mature_334_residues SKMTNDLEKIRGGVHIAVQGYEVDRITEVPIMRRAEKVYLICKPGNNDSKRGKAFKNVIIKKFEEKRVNYEIVEADLFDL DDIVKKMKLIIAHERKEFGDVKFYINVSSGSTIGCIAGITCAMILNKENSRIIPYYVMPEKSLDGLSEKEKEELKKEYES KYNCPYLPRSFGVRGVKLIYPFEVTLPREELLIFLKFIGRAGNRGLTIKELSILTKEEFLNVDLNDNESIKELIKAVERK ESVSNSSVKKMKNLVRELKEVVGSDVDDLKKIITWRKKCRSSVSSTGQSDLVWVNKNVVEKLLELELIEKPEKIGKSKYI RISEKGKMLLNYVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1513_METJA (Q58908)
Other databases:
- EMBL: L77117 - PIR: H64488 - RefSeq: NP_248520.1 - ProteinModelPortal: Q58908 - GeneID: 1452420 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1513 - NMPDR: fig|243232.1.peg.1557 - TIGR: MJ1513 - HOGENOM: HBG546124 - ProtClustDB: CLSK796902 - BioCyc: MJAN243232:MJ_1513-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38470; Mature: 38338
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKMTNDLEKIRGGVHIAVQGYEVDRITEVPIMRRAEKVYLICKPGNNDSKRGKAFKNVI CCCHHHHHHHHCCCEEEEEECCEECCCCCCHHHHCCCEEEEEEECCCCCHHHHHHHHHHH IKKFEEKRVNYEIVEADLFDLDDIVKKMKLIIAHERKEFGDVKFYINVSSGSTIGCIAGI HHHHHHHCCCEEEEECHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHH TCAMILNKENSRIIPYYVMPEKSLDGLSEKEKEELKKEYESKYNCPYLPRSFGVRGVKLI HHHHEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHCCCCCEEEE YPFEVTLPREELLIFLKFIGRAGNRGLTIKELSILTKEEFLNVDLNDNESIKELIKAVER EEEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHH KESVSNSSVKKMKNLVRELKEVVGSDVDDLKKIITWRKKCRSSVSSTGQSDLVWVNKNVV HHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHH EKLLELELIEKPEKIGKSKYIRISEKGKMLLNYVG HHHHHHHHHHCHHHCCCCCEEEEECCCCEEEEECC >Mature Secondary Structure SKMTNDLEKIRGGVHIAVQGYEVDRITEVPIMRRAEKVYLICKPGNNDSKRGKAFKNVI CCHHHHHHHHCCCEEEEEECCEECCCCCCHHHHCCCEEEEEEECCCCCHHHHHHHHHHH IKKFEEKRVNYEIVEADLFDLDDIVKKMKLIIAHERKEFGDVKFYINVSSGSTIGCIAGI HHHHHHHCCCEEEEECHHCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHH TCAMILNKENSRIIPYYVMPEKSLDGLSEKEKEELKKEYESKYNCPYLPRSFGVRGVKLI HHHHEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHCCCCCEEEE YPFEVTLPREELLIFLKFIGRAGNRGLTIKELSILTKEEFLNVDLNDNESIKELIKAVER EEEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHH KESVSNSSVKKMKNLVRELKEVVGSDVDDLKKIITWRKKCRSSVSSTGQSDLVWVNKNVV HHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECHHHH EKLLELELIEKPEKIGKSKYIRISEKGKMLLNYVG HHHHHHHHHHCHHHCCCCCEEEEECCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087