| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
Click here to switch to the map view.
The map label for this gene is 15669704
Identifier: 15669704
GI number: 15669704
Start: 1482498
End: 1483079
Strand: Reverse
Name: 15669704
Synonym: MJ1510
Alternate gene names: NA
Gene position: 1483079-1482498 (Counterclockwise)
Preceding gene: 15669707
Following gene: 15669700
Centisome position: 89.08
GC content: 31.1
Gene sequence:
>582_bases ATGGGGTTTTTAGAGGATAAAAAGAGGACATTAATGAATTTAGAACTTGCTATAAGAGAGGGCTTAGTTGATGAGGAGAT AATTCCAATACTAAACAAAATCAATGAAATCGATAATTATTACACAACCTCAAGCTGTATTGGTAGGGTTGGAATAATGG AAATTCCCAAAGATAAGAATCCAAAGCTATATTCAAGATGGCTTGGGAAGTGGCATCACTATGCCTCTTATGATGAGTTA TTTAACGCTTTAAAAAACAAAAAAGAGGGTTATATAGTTTTTGTTATGAACTCCCCCATATTGCATATTGCATGTAAAGA TATAGAATCAGCAAAAAAGATGCTTGAATTAGCAATACACTCTGGATTAAAAGCCTCTTCCATAAAATCAATTTCAGATA AAAGAGTTATTGTTGAAATTTTAACAACTTATAAGGTAGATACCCCTATAGGAGAAGATGGGGAGATATTTGTTGATAAT AATTACTTAAAATTTTTATTGGACTACAGCAACTCTAAACTTAAAAGAGCAAGAGAAATTTTAATGAGATGGGCAAATAG ATTGGATGAACTGAAAAAATAA
Upstream 100 bases:
>100_bases ATATAAAAAACATAGAAATTTAAATCCGCTAATTATATCCATAAGATTTTATAGTGGCATAAATTTGCACAGTTATATTA ATTAATATATAGGTGAAAAT
Downstream 100 bases:
>100_bases AAAATGAAAAATAGCGATTATAATGTGTAGTCTAATACTTTCTTAGCTTCTTCAATATGCTCTTTTCTTATTCTCTCAAT ATCTTCATGTAACGCTTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MGFLEDKKRTLMNLELAIREGLVDEEIIPILNKINEIDNYYTTSSCIGRVGIMEIPKDKNPKLYSRWLGKWHHYASYDEL FNALKNKKEGYIVFVMNSPILHIACKDIESAKKMLELAIHSGLKASSIKSISDKRVIVEILTTYKVDTPIGEDGEIFVDN NYLKFLLDYSNSKLKRAREILMRWANRLDELKK
Sequences:
>Translated_193_residues MGFLEDKKRTLMNLELAIREGLVDEEIIPILNKINEIDNYYTTSSCIGRVGIMEIPKDKNPKLYSRWLGKWHHYASYDEL FNALKNKKEGYIVFVMNSPILHIACKDIESAKKMLELAIHSGLKASSIKSISDKRVIVEILTTYKVDTPIGEDGEIFVDN NYLKFLLDYSNSKLKRAREILMRWANRLDELKK >Mature_192_residues GFLEDKKRTLMNLELAIREGLVDEEIIPILNKINEIDNYYTTSSCIGRVGIMEIPKDKNPKLYSRWLGKWHHYASYDELF NALKNKKEGYIVFVMNSPILHIACKDIESAKKMLELAIHSGLKASSIKSISDKRVIVEILTTYKVDTPIGEDGEIFVDNN YLKFLLDYSNSKLKRAREILMRWANRLDELKK
Specific function: Unknown
COG id: COG1590
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0130 family
Homologues:
Organism=Homo sapiens, GI42734381, Length=173, Percent_Identity=27.7456647398844, Blast_Score=87, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1510_METJA (Q58905)
Other databases:
- EMBL: L77117 - PIR: E64488 - RefSeq: NP_248517.1 - ProteinModelPortal: Q58905 - SMR: Q58905 - GeneID: 1452417 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1510 - NMPDR: fig|243232.1.peg.1554 - TIGR: MJ1510 - HOGENOM: HBG717229 - OMA: LGKWHHY - ProtClustDB: PRK04235 - BioCyc: MJAN243232:MJ_1510-MONOMER - HAMAP: MF_00266 - InterPro: IPR003827 - InterPro: IPR022908
Pfam domain/function: PF02676 TYW3; SSF111278 DUF207
EC number: NA
Molecular weight: Translated: 22401; Mature: 22270
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFLEDKKRTLMNLELAIREGLVDEEIIPILNKINEIDNYYTTSSCIGRVGIMEIPKDKN CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCEECCCCCC PKLYSRWLGKWHHYASYDELFNALKNKKEGYIVFVMNSPILHIACKDIESAKKMLELAIH CHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCCEEEEEHHHHHHHHHHHHHHHH SGLKASSIKSISDKRVIVEILTTYKVDTPIGEDGEIFVDNNYLKFLLDYSNSKLKRAREI CCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCEEEEEECCCHHHHHHHHH LMRWANRLDELKK HHHHHHHHHHHCC >Mature Secondary Structure GFLEDKKRTLMNLELAIREGLVDEEIIPILNKINEIDNYYTTSSCIGRVGIMEIPKDKN CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCEECCCCCC PKLYSRWLGKWHHYASYDELFNALKNKKEGYIVFVMNSPILHIACKDIESAKKMLELAIH CHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCCEEEEEHHHHHHHHHHHHHHHH SGLKASSIKSISDKRVIVEILTTYKVDTPIGEDGEIFVDNNYLKFLLDYSNSKLKRAREI CCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEEEECCCEEEEEECCCHHHHHHHHH LMRWANRLDELKK HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087