Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15669664

Identifier: 15669664

GI number: 15669664

Start: 1443160

End: 1444794

Strand: Direct

Name: 15669664

Synonym: MJ1472

Alternate gene names: NA

Gene position: 1443160-1444794 (Clockwise)

Preceding gene: 15669663

Following gene: 15669666

Centisome position: 86.68

GC content: 28.81

Gene sequence:

>1635_bases
ATGTATTTCTCTCAAAATGCGATAATTTTAGTTATGCTAATGTTTGTGATATCTGCAGTGTTTTATGCAACAATTGATTA
CAAAACAAAGGAAGTAGAGGATGAAATAAAAATAAAAGAAGTAAGTTTATATGAAAAAAATTTAATAAATACTATAGATA
GAAATATAGATAAAATTGTAGAAGATGCCTTTGTAAATGCAAGCTATAAAATAATGAAAGAACGAAAATTTTTTACAGCT
TCAAGTGAGGCAGTTGCGTATATAACCAGCTATATAAAAAATGAAACGAAAGAATCACTAAATAATGTGAATTATGGCTA
CTCAAATATATCCTATAACATTAGTTCTGTTAAAATTTCACCTACATACGACCCATTAGTAGTACATTTATATTGTGAAA
TTGACATAAAATATTCAAAAAAATTAAATAATGGTGAGTTAATCGCATTAAAGCCAATAGTCATCAACAGAGACATAAAA
TTATCAAGAATTCCTGACCCATATGTCTATTTAAATAAATTTTACTACACCTGGGGTTATGAAAAAAAGATAAATATATA
TAATTTTCCAAATGATAACTACAACCGTACTTTCTGTATAATATTAAATAGTAGTAACTTTAACTATAGTGAAATGCATA
ACCCTCAATCTCCAACAGAGCTGAGAGTAATTGGCTGGGATTCAGTAAGTAACAAAATTATTCTTTTACCTTACTGGGTT
CAAACCTGGAGAGAAGGAAATAACGATGTATCAGTAATTTGGGTTAGAGCAAATAAAAATGAAATTTACAACTACAATAA
TGGGCAGGGGTATATATACATACTCTACAATTCAACTACTCCGGTAGATAGACAAGACCCAGAACACACATTTATATTCT
TTGATGATTTCAATTACTTTAACCCAGATAAATGGGATTCTGTTGGATACTTTATCATAAATAATAGTAAAATAACGGTA
ATTGCAGGAGCAGGTTCAAGCGTATATACAAAACAAACTTATGGAACTAGATATGAATTAATATTTAGAGCAAACTTTAC
TCCATCCCATGCCCAAACTATAGGATTCTTTACACAATTAAGCGATAACGATGGAGTGGGTTGGGATATGTATGATTGGA
CTGGAAATAATCCAGAACTTTATATGAGAGTTGGATACAGTGGAAGTGATATTGGGGATTATGTTCCTAATTCAAATAAA
TACTTAAATAAATTTTATATTTATGATTTAAAAAGAATTTCAACCACTGACTTAAACTTTACAATATTTAATGACACTTT
GGATATTGAATATAGCAACTCATTTACTAATGGAAATAAGGGAAATAACTATCCAATTTCAATAACTGCTCTTATAAATT
TAAATACTAATGTTACAGTGGATTGGATATTTTTAAAAGATATAAATGATATTACAACTACCGTCCCTCCAATAGGTGTT
GATGAATATCCAAATCTCGACTATAAAGAAGAAAAACCAAAAACATTTACTGGGACTATATACTATGGAGAACCAGGGAA
ATATATATTGGTCTATAATAGTACGTATTCTATCATTGGATTATATACTAACAAAACTGACTACTGGCTTTATCCAAATA
TGCCAGGATATAAACCACTTATAGAGGAAAATTAA

Upstream 100 bases:

>100_bases
AAATATAGAAACTACGATATACATATGCCTGTGTATCTTTCAAAAAATGTATCCTCTTCAAGGGTTGAATTATATATATT
AGGAAATTAAGGGGATTGCC

Downstream 100 bases:

>100_bases
TTATATTTTTATTAATTTAGTTGCTTCAACCATATTCTTTAACTTATTAAAAGCGACGTCTATTGGCAATAACCTCATTC
CACAATCGGGGTCTATTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 544; Mature: 544

Protein sequence:

>544_residues
MYFSQNAIILVMLMFVISAVFYATIDYKTKEVEDEIKIKEVSLYEKNLINTIDRNIDKIVEDAFVNASYKIMKERKFFTA
SSEAVAYITSYIKNETKESLNNVNYGYSNISYNISSVKISPTYDPLVVHLYCEIDIKYSKKLNNGELIALKPIVINRDIK
LSRIPDPYVYLNKFYYTWGYEKKINIYNFPNDNYNRTFCIILNSSNFNYSEMHNPQSPTELRVIGWDSVSNKIILLPYWV
QTWREGNNDVSVIWVRANKNEIYNYNNGQGYIYILYNSTTPVDRQDPEHTFIFFDDFNYFNPDKWDSVGYFIINNSKITV
IAGAGSSVYTKQTYGTRYELIFRANFTPSHAQTIGFFTQLSDNDGVGWDMYDWTGNNPELYMRVGYSGSDIGDYVPNSNK
YLNKFYIYDLKRISTTDLNFTIFNDTLDIEYSNSFTNGNKGNNYPISITALINLNTNVTVDWIFLKDINDITTTVPPIGV
DEYPNLDYKEEKPKTFTGTIYYGEPGKYILVYNSTYSIIGLYTNKTDYWLYPNMPGYKPLIEEN

Sequences:

>Translated_544_residues
MYFSQNAIILVMLMFVISAVFYATIDYKTKEVEDEIKIKEVSLYEKNLINTIDRNIDKIVEDAFVNASYKIMKERKFFTA
SSEAVAYITSYIKNETKESLNNVNYGYSNISYNISSVKISPTYDPLVVHLYCEIDIKYSKKLNNGELIALKPIVINRDIK
LSRIPDPYVYLNKFYYTWGYEKKINIYNFPNDNYNRTFCIILNSSNFNYSEMHNPQSPTELRVIGWDSVSNKIILLPYWV
QTWREGNNDVSVIWVRANKNEIYNYNNGQGYIYILYNSTTPVDRQDPEHTFIFFDDFNYFNPDKWDSVGYFIINNSKITV
IAGAGSSVYTKQTYGTRYELIFRANFTPSHAQTIGFFTQLSDNDGVGWDMYDWTGNNPELYMRVGYSGSDIGDYVPNSNK
YLNKFYIYDLKRISTTDLNFTIFNDTLDIEYSNSFTNGNKGNNYPISITALINLNTNVTVDWIFLKDINDITTTVPPIGV
DEYPNLDYKEEKPKTFTGTIYYGEPGKYILVYNSTYSIIGLYTNKTDYWLYPNMPGYKPLIEEN
>Mature_544_residues
MYFSQNAIILVMLMFVISAVFYATIDYKTKEVEDEIKIKEVSLYEKNLINTIDRNIDKIVEDAFVNASYKIMKERKFFTA
SSEAVAYITSYIKNETKESLNNVNYGYSNISYNISSVKISPTYDPLVVHLYCEIDIKYSKKLNNGELIALKPIVINRDIK
LSRIPDPYVYLNKFYYTWGYEKKINIYNFPNDNYNRTFCIILNSSNFNYSEMHNPQSPTELRVIGWDSVSNKIILLPYWV
QTWREGNNDVSVIWVRANKNEIYNYNNGQGYIYILYNSTTPVDRQDPEHTFIFFDDFNYFNPDKWDSVGYFIINNSKITV
IAGAGSSVYTKQTYGTRYELIFRANFTPSHAQTIGFFTQLSDNDGVGWDMYDWTGNNPELYMRVGYSGSDIGDYVPNSNK
YLNKFYIYDLKRISTTDLNFTIFNDTLDIEYSNSFTNGNKGNNYPISITALINLNTNVTVDWIFLKDINDITTTVPPIGV
DEYPNLDYKEEKPKTFTGTIYYGEPGKYILVYNSTYSIIGLYTNKTDYWLYPNMPGYKPLIEEN

Specific function: Unknown

COG id: COG5306

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1472_METJA (Q58867)

Other databases:

- EMBL:   L77117
- PIR:   G64483
- RefSeq:   NP_248477.1
- ProteinModelPortal:   Q58867
- GeneID:   1452377
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1472
- NMPDR:   fig|243232.1.peg.1514
- TIGR:   MJ1472
- HOGENOM:   HBG541241
- OMA:   LPYWVQT
- ProtClustDB:   CLSK796882
- BioCyc:   MJAN243232:MJ_1472-MONOMER
- InterPro:   IPR018765

Pfam domain/function: PF10102 DUF2341

EC number: NA

Molecular weight: Translated: 63401; Mature: 63401

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYFSQNAIILVMLMFVISAVFYATIDYKTKEVEDEIKIKEVSLYEKNLINTIDRNIDKIV
CEECCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHH
EDAFVNASYKIMKERKFFTASSEAVAYITSYIKNETKESLNNVNYGYSNISYNISSVKIS
HHHHCCCEEEEEEECEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEC
PTYDPLVVHLYCEIDIKYSKKLNNGELIALKPIVINRDIKLSRIPDPYVYLNKFYYTWGY
CCCCCEEEEEEEEEEEEEECCCCCCCEEEEEEEEEECCEEEECCCCCEEEEEEEEEEECC
EKKINIYNFPNDNYNRTFCIILNSSNFNYSEMHNPQSPTELRVIGWDSVSNKIILLPYWV
CEEEEEEECCCCCCCEEEEEEEECCCCCHHHCCCCCCCCEEEEEEECCCCCEEEEEEEEH
QTWREGNNDVSVIWVRANKNEIYNYNNGQGYIYILYNSTTPVDRQDPEHTFIFFDDFNYF
HHHHCCCCCEEEEEEEECCCEEEEEECCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCC
NPDKWDSVGYFIINNSKITVIAGAGSSVYTKQTYGTRYELIFRANFTPSHAQTIGFFTQL
CCCCCCCEEEEEECCCEEEEEEECCCCEEEECCCCCEEEEEEEECCCCCCCEEEEEEEEE
SDNDGVGWDMYDWTGNNPELYMRVGYSGSDIGDYVPNSNKYLNKFYIYDLKRISTTDLNF
CCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEEECCEEE
TIFNDTLDIEYSNSFTNGNKGNNYPISITALINLNTNVTVDWIFLKDINDITTTVPPIGV
EEECCEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCHHCCCCCCCC
DEYPNLDYKEEKPKTFTGTIYYGEPGKYILVYNSTYSIIGLYTNKTDYWLYPNMPGYKPL
CCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCEEEEEEEECCCEEEECCCCCCCCCC
IEEN
CCCC
>Mature Secondary Structure
MYFSQNAIILVMLMFVISAVFYATIDYKTKEVEDEIKIKEVSLYEKNLINTIDRNIDKIV
CEECCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHH
EDAFVNASYKIMKERKFFTASSEAVAYITSYIKNETKESLNNVNYGYSNISYNISSVKIS
HHHHCCCEEEEEEECEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEC
PTYDPLVVHLYCEIDIKYSKKLNNGELIALKPIVINRDIKLSRIPDPYVYLNKFYYTWGY
CCCCCEEEEEEEEEEEEEECCCCCCCEEEEEEEEEECCEEEECCCCCEEEEEEEEEEECC
EKKINIYNFPNDNYNRTFCIILNSSNFNYSEMHNPQSPTELRVIGWDSVSNKIILLPYWV
CEEEEEEECCCCCCCEEEEEEEECCCCCHHHCCCCCCCCEEEEEEECCCCCEEEEEEEEH
QTWREGNNDVSVIWVRANKNEIYNYNNGQGYIYILYNSTTPVDRQDPEHTFIFFDDFNYF
HHHHCCCCCEEEEEEEECCCEEEEEECCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCC
NPDKWDSVGYFIINNSKITVIAGAGSSVYTKQTYGTRYELIFRANFTPSHAQTIGFFTQL
CCCCCCCEEEEEECCCEEEEEEECCCCEEEECCCCCEEEEEEEECCCCCCCEEEEEEEEE
SDNDGVGWDMYDWTGNNPELYMRVGYSGSDIGDYVPNSNKYLNKFYIYDLKRISTTDLNF
CCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEEECCEEE
TIFNDTLDIEYSNSFTNGNKGNNYPISITALINLNTNVTVDWIFLKDINDITTTVPPIGV
EEECCEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCHHCCCCCCCC
DEYPNLDYKEEKPKTFTGTIYYGEPGKYILVYNSTYSIIGLYTNKTDYWLYPNMPGYKPL
CCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCEEEEEEEECCCEEEECCCCCCCCCC
IEEN
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087