| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669664
Identifier: 15669664
GI number: 15669664
Start: 1443160
End: 1444794
Strand: Direct
Name: 15669664
Synonym: MJ1472
Alternate gene names: NA
Gene position: 1443160-1444794 (Clockwise)
Preceding gene: 15669663
Following gene: 15669666
Centisome position: 86.68
GC content: 28.81
Gene sequence:
>1635_bases ATGTATTTCTCTCAAAATGCGATAATTTTAGTTATGCTAATGTTTGTGATATCTGCAGTGTTTTATGCAACAATTGATTA CAAAACAAAGGAAGTAGAGGATGAAATAAAAATAAAAGAAGTAAGTTTATATGAAAAAAATTTAATAAATACTATAGATA GAAATATAGATAAAATTGTAGAAGATGCCTTTGTAAATGCAAGCTATAAAATAATGAAAGAACGAAAATTTTTTACAGCT TCAAGTGAGGCAGTTGCGTATATAACCAGCTATATAAAAAATGAAACGAAAGAATCACTAAATAATGTGAATTATGGCTA CTCAAATATATCCTATAACATTAGTTCTGTTAAAATTTCACCTACATACGACCCATTAGTAGTACATTTATATTGTGAAA TTGACATAAAATATTCAAAAAAATTAAATAATGGTGAGTTAATCGCATTAAAGCCAATAGTCATCAACAGAGACATAAAA TTATCAAGAATTCCTGACCCATATGTCTATTTAAATAAATTTTACTACACCTGGGGTTATGAAAAAAAGATAAATATATA TAATTTTCCAAATGATAACTACAACCGTACTTTCTGTATAATATTAAATAGTAGTAACTTTAACTATAGTGAAATGCATA ACCCTCAATCTCCAACAGAGCTGAGAGTAATTGGCTGGGATTCAGTAAGTAACAAAATTATTCTTTTACCTTACTGGGTT CAAACCTGGAGAGAAGGAAATAACGATGTATCAGTAATTTGGGTTAGAGCAAATAAAAATGAAATTTACAACTACAATAA TGGGCAGGGGTATATATACATACTCTACAATTCAACTACTCCGGTAGATAGACAAGACCCAGAACACACATTTATATTCT TTGATGATTTCAATTACTTTAACCCAGATAAATGGGATTCTGTTGGATACTTTATCATAAATAATAGTAAAATAACGGTA ATTGCAGGAGCAGGTTCAAGCGTATATACAAAACAAACTTATGGAACTAGATATGAATTAATATTTAGAGCAAACTTTAC TCCATCCCATGCCCAAACTATAGGATTCTTTACACAATTAAGCGATAACGATGGAGTGGGTTGGGATATGTATGATTGGA CTGGAAATAATCCAGAACTTTATATGAGAGTTGGATACAGTGGAAGTGATATTGGGGATTATGTTCCTAATTCAAATAAA TACTTAAATAAATTTTATATTTATGATTTAAAAAGAATTTCAACCACTGACTTAAACTTTACAATATTTAATGACACTTT GGATATTGAATATAGCAACTCATTTACTAATGGAAATAAGGGAAATAACTATCCAATTTCAATAACTGCTCTTATAAATT TAAATACTAATGTTACAGTGGATTGGATATTTTTAAAAGATATAAATGATATTACAACTACCGTCCCTCCAATAGGTGTT GATGAATATCCAAATCTCGACTATAAAGAAGAAAAACCAAAAACATTTACTGGGACTATATACTATGGAGAACCAGGGAA ATATATATTGGTCTATAATAGTACGTATTCTATCATTGGATTATATACTAACAAAACTGACTACTGGCTTTATCCAAATA TGCCAGGATATAAACCACTTATAGAGGAAAATTAA
Upstream 100 bases:
>100_bases AAATATAGAAACTACGATATACATATGCCTGTGTATCTTTCAAAAAATGTATCCTCTTCAAGGGTTGAATTATATATATT AGGAAATTAAGGGGATTGCC
Downstream 100 bases:
>100_bases TTATATTTTTATTAATTTAGTTGCTTCAACCATATTCTTTAACTTATTAAAAGCGACGTCTATTGGCAATAACCTCATTC CACAATCGGGGTCTATTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 544; Mature: 544
Protein sequence:
>544_residues MYFSQNAIILVMLMFVISAVFYATIDYKTKEVEDEIKIKEVSLYEKNLINTIDRNIDKIVEDAFVNASYKIMKERKFFTA SSEAVAYITSYIKNETKESLNNVNYGYSNISYNISSVKISPTYDPLVVHLYCEIDIKYSKKLNNGELIALKPIVINRDIK LSRIPDPYVYLNKFYYTWGYEKKINIYNFPNDNYNRTFCIILNSSNFNYSEMHNPQSPTELRVIGWDSVSNKIILLPYWV QTWREGNNDVSVIWVRANKNEIYNYNNGQGYIYILYNSTTPVDRQDPEHTFIFFDDFNYFNPDKWDSVGYFIINNSKITV IAGAGSSVYTKQTYGTRYELIFRANFTPSHAQTIGFFTQLSDNDGVGWDMYDWTGNNPELYMRVGYSGSDIGDYVPNSNK YLNKFYIYDLKRISTTDLNFTIFNDTLDIEYSNSFTNGNKGNNYPISITALINLNTNVTVDWIFLKDINDITTTVPPIGV DEYPNLDYKEEKPKTFTGTIYYGEPGKYILVYNSTYSIIGLYTNKTDYWLYPNMPGYKPLIEEN
Sequences:
>Translated_544_residues MYFSQNAIILVMLMFVISAVFYATIDYKTKEVEDEIKIKEVSLYEKNLINTIDRNIDKIVEDAFVNASYKIMKERKFFTA SSEAVAYITSYIKNETKESLNNVNYGYSNISYNISSVKISPTYDPLVVHLYCEIDIKYSKKLNNGELIALKPIVINRDIK LSRIPDPYVYLNKFYYTWGYEKKINIYNFPNDNYNRTFCIILNSSNFNYSEMHNPQSPTELRVIGWDSVSNKIILLPYWV QTWREGNNDVSVIWVRANKNEIYNYNNGQGYIYILYNSTTPVDRQDPEHTFIFFDDFNYFNPDKWDSVGYFIINNSKITV IAGAGSSVYTKQTYGTRYELIFRANFTPSHAQTIGFFTQLSDNDGVGWDMYDWTGNNPELYMRVGYSGSDIGDYVPNSNK YLNKFYIYDLKRISTTDLNFTIFNDTLDIEYSNSFTNGNKGNNYPISITALINLNTNVTVDWIFLKDINDITTTVPPIGV DEYPNLDYKEEKPKTFTGTIYYGEPGKYILVYNSTYSIIGLYTNKTDYWLYPNMPGYKPLIEEN >Mature_544_residues MYFSQNAIILVMLMFVISAVFYATIDYKTKEVEDEIKIKEVSLYEKNLINTIDRNIDKIVEDAFVNASYKIMKERKFFTA SSEAVAYITSYIKNETKESLNNVNYGYSNISYNISSVKISPTYDPLVVHLYCEIDIKYSKKLNNGELIALKPIVINRDIK LSRIPDPYVYLNKFYYTWGYEKKINIYNFPNDNYNRTFCIILNSSNFNYSEMHNPQSPTELRVIGWDSVSNKIILLPYWV QTWREGNNDVSVIWVRANKNEIYNYNNGQGYIYILYNSTTPVDRQDPEHTFIFFDDFNYFNPDKWDSVGYFIINNSKITV IAGAGSSVYTKQTYGTRYELIFRANFTPSHAQTIGFFTQLSDNDGVGWDMYDWTGNNPELYMRVGYSGSDIGDYVPNSNK YLNKFYIYDLKRISTTDLNFTIFNDTLDIEYSNSFTNGNKGNNYPISITALINLNTNVTVDWIFLKDINDITTTVPPIGV DEYPNLDYKEEKPKTFTGTIYYGEPGKYILVYNSTYSIIGLYTNKTDYWLYPNMPGYKPLIEEN
Specific function: Unknown
COG id: COG5306
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1472_METJA (Q58867)
Other databases:
- EMBL: L77117 - PIR: G64483 - RefSeq: NP_248477.1 - ProteinModelPortal: Q58867 - GeneID: 1452377 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1472 - NMPDR: fig|243232.1.peg.1514 - TIGR: MJ1472 - HOGENOM: HBG541241 - OMA: LPYWVQT - ProtClustDB: CLSK796882 - BioCyc: MJAN243232:MJ_1472-MONOMER - InterPro: IPR018765
Pfam domain/function: PF10102 DUF2341
EC number: NA
Molecular weight: Translated: 63401; Mature: 63401
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYFSQNAIILVMLMFVISAVFYATIDYKTKEVEDEIKIKEVSLYEKNLINTIDRNIDKIV CEECCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHH EDAFVNASYKIMKERKFFTASSEAVAYITSYIKNETKESLNNVNYGYSNISYNISSVKIS HHHHCCCEEEEEEECEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEC PTYDPLVVHLYCEIDIKYSKKLNNGELIALKPIVINRDIKLSRIPDPYVYLNKFYYTWGY CCCCCEEEEEEEEEEEEEECCCCCCCEEEEEEEEEECCEEEECCCCCEEEEEEEEEEECC EKKINIYNFPNDNYNRTFCIILNSSNFNYSEMHNPQSPTELRVIGWDSVSNKIILLPYWV CEEEEEEECCCCCCCEEEEEEEECCCCCHHHCCCCCCCCEEEEEEECCCCCEEEEEEEEH QTWREGNNDVSVIWVRANKNEIYNYNNGQGYIYILYNSTTPVDRQDPEHTFIFFDDFNYF HHHHCCCCCEEEEEEEECCCEEEEEECCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCC NPDKWDSVGYFIINNSKITVIAGAGSSVYTKQTYGTRYELIFRANFTPSHAQTIGFFTQL CCCCCCCEEEEEECCCEEEEEEECCCCEEEECCCCCEEEEEEEECCCCCCCEEEEEEEEE SDNDGVGWDMYDWTGNNPELYMRVGYSGSDIGDYVPNSNKYLNKFYIYDLKRISTTDLNF CCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEEECCEEE TIFNDTLDIEYSNSFTNGNKGNNYPISITALINLNTNVTVDWIFLKDINDITTTVPPIGV EEECCEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCHHCCCCCCCC DEYPNLDYKEEKPKTFTGTIYYGEPGKYILVYNSTYSIIGLYTNKTDYWLYPNMPGYKPL CCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCEEEEEEEECCCEEEECCCCCCCCCC IEEN CCCC >Mature Secondary Structure MYFSQNAIILVMLMFVISAVFYATIDYKTKEVEDEIKIKEVSLYEKNLINTIDRNIDKIV CEECCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHH EDAFVNASYKIMKERKFFTASSEAVAYITSYIKNETKESLNNVNYGYSNISYNISSVKIS HHHHCCCEEEEEEECEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEC PTYDPLVVHLYCEIDIKYSKKLNNGELIALKPIVINRDIKLSRIPDPYVYLNKFYYTWGY CCCCCEEEEEEEEEEEEEECCCCCCCEEEEEEEEEECCEEEECCCCCEEEEEEEEEEECC EKKINIYNFPNDNYNRTFCIILNSSNFNYSEMHNPQSPTELRVIGWDSVSNKIILLPYWV CEEEEEEECCCCCCCEEEEEEEECCCCCHHHCCCCCCCCEEEEEEECCCCCEEEEEEEEH QTWREGNNDVSVIWVRANKNEIYNYNNGQGYIYILYNSTTPVDRQDPEHTFIFFDDFNYF HHHHCCCCCEEEEEEEECCCEEEEEECCCEEEEEEECCCCCCCCCCCCEEEEEEECCCCC NPDKWDSVGYFIINNSKITVIAGAGSSVYTKQTYGTRYELIFRANFTPSHAQTIGFFTQL CCCCCCCEEEEEECCCEEEEEEECCCCEEEECCCCCEEEEEEEECCCCCCCEEEEEEEEE SDNDGVGWDMYDWTGNNPELYMRVGYSGSDIGDYVPNSNKYLNKFYIYDLKRISTTDLNF CCCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEEEEEEEECCEEE TIFNDTLDIEYSNSFTNGNKGNNYPISITALINLNTNVTVDWIFLKDINDITTTVPPIGV EEECCEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCHHCCCCCCCC DEYPNLDYKEEKPKTFTGTIYYGEPGKYILVYNSTYSIIGLYTNKTDYWLYPNMPGYKPL CCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEECCEEEEEEEECCCEEEECCCCCCCCCC IEEN CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087