| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669663
Identifier: 15669663
GI number: 15669663
Start: 1442613
End: 1443149
Strand: Direct
Name: 15669663
Synonym: MJ1471
Alternate gene names: NA
Gene position: 1442613-1443149 (Clockwise)
Preceding gene: 15669662
Following gene: 15669664
Centisome position: 86.64
GC content: 28.31
Gene sequence:
>537_bases ATGATTAATAGCGTTGATTTAGCAATTGGAACTGCCATTCTTCTCATAGGGATGGCATATTGGACAGTATCTATTGTCGA ACATAACAACAATTATGTGGATATTGTAAAATCTGATTATATTTTTGATAAAGGAATAAGCACTATGGAACATCTATCAG AGGATGGAACTTTGCAAGATGCTGTTCTTTTATATTATTTTGATAGAGTTAATGATTCAAAAAAACTTTTAGAGGAAAGA ATTCCACTTAAACATTATCTTCTTTATATAGATAATAACCTTCTAATAAATAAATCCAATGGGGTTAATAATAGTAATAG TGTATATATTTTAACAGTTTTAACTTTAAACAGAAGTGAAGGGTGGTATGTAATTTATGGAAATGAGGACTTTGTAAATA TATCCAAGGAGAGGTTTCTTGACTATGATGACGCCTATAATTATCTAAAATATAGAAACTACGATATACATATGCCTGTG TATCTTTCAAAAAATGTATCCTCTTCAAGGGTTGAATTATATATATTAGGAAATTAA
Upstream 100 bases:
>100_bases GCTCACCTCTTCCAGTAGAGTTTTTAATTAAAACAAATGAAAACACTGATTTTTACTATTTAACACTATCACCTAACAAT GTCACCATTGTGGTGAAACC
Downstream 100 bases:
>100_bases GGGGATTGCCATGTATTTCTCTCAAAATGCGATAATTTTAGTTATGCTAATGTTTGTGATATCTGCAGTGTTTTATGCAA CAATTGATTACAAAACAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MINSVDLAIGTAILLIGMAYWTVSIVEHNNNYVDIVKSDYIFDKGISTMEHLSEDGTLQDAVLLYYFDRVNDSKKLLEER IPLKHYLLYIDNNLLINKSNGVNNSNSVYILTVLTLNRSEGWYVIYGNEDFVNISKERFLDYDDAYNYLKYRNYDIHMPV YLSKNVSSSRVELYILGN
Sequences:
>Translated_178_residues MINSVDLAIGTAILLIGMAYWTVSIVEHNNNYVDIVKSDYIFDKGISTMEHLSEDGTLQDAVLLYYFDRVNDSKKLLEER IPLKHYLLYIDNNLLINKSNGVNNSNSVYILTVLTLNRSEGWYVIYGNEDFVNISKERFLDYDDAYNYLKYRNYDIHMPV YLSKNVSSSRVELYILGN >Mature_178_residues MINSVDLAIGTAILLIGMAYWTVSIVEHNNNYVDIVKSDYIFDKGISTMEHLSEDGTLQDAVLLYYFDRVNDSKKLLEER IPLKHYLLYIDNNLLINKSNGVNNSNSVYILTVLTLNRSEGWYVIYGNEDFVNISKERFLDYDDAYNYLKYRNYDIHMPV YLSKNVSSSRVELYILGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1471_METJA (Q58866)
Other databases:
- EMBL: L77117 - PIR: F64483 - RefSeq: NP_248476.1 - ProteinModelPortal: Q58866 - GeneID: 1452376 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1471 - NMPDR: fig|243232.1.peg.1513 - TIGR: MJ1471 - HOGENOM: HBG545818 - OMA: NRSEGWY - ProtClustDB: CLSK876587 - BioCyc: MJAN243232:MJ_1471-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20693; Mature: 20693
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xe7e0e7c)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINSVDLAIGTAILLIGMAYWTVSIVEHNNNYVDIVKSDYIFDKGISTMEHLSEDGTLQD CCCCCHHHHHHHHHHHHHHHHEEEEEEECCCEEEEEECCEEECCCCHHHHHHCCCCCHHH AVLLYYFDRVNDSKKLLEERIPLKHYLLYIDNNLLINKSNGVNNSNSVYILTVLTLNRSE EEEEEEEECCCCHHHHHHHCCCHHHEEEEECCEEEEECCCCCCCCCCEEEEEEEEEECCC GWYVIYGNEDFVNISKERFLDYDDAYNYLKYRNYDIHMPVYLSKNVSSSRVELYILGN CEEEEECCCCEEECCHHHCCCCHHHCCHHEECCCEEEEEEEEECCCCCCEEEEEEECH >Mature Secondary Structure MINSVDLAIGTAILLIGMAYWTVSIVEHNNNYVDIVKSDYIFDKGISTMEHLSEDGTLQD CCCCCHHHHHHHHHHHHHHHHEEEEEEECCCEEEEEECCEEECCCCHHHHHHCCCCCHHH AVLLYYFDRVNDSKKLLEERIPLKHYLLYIDNNLLINKSNGVNNSNSVYILTVLTLNRSE EEEEEEEECCCCHHHHHHHCCCHHHEEEEECCEEEEECCCCCCCCCCEEEEEEEEEECCC GWYVIYGNEDFVNISKERFLDYDDAYNYLKYRNYDIHMPVYLSKNVSSSRVELYILGN CEEEEECCCCEEECCHHHCCCCHHHCCHHEECCCEEEEEEEEECCCCCCEEEEEEECH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087