Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15669651

Identifier: 15669651

GI number: 15669651

Start: 1429935

End: 1430423

Strand: Reverse

Name: 15669651

Synonym: MJ1460

Alternate gene names: NA

Gene position: 1430423-1429935 (Counterclockwise)

Preceding gene: 15669652

Following gene: 15669646

Centisome position: 85.91

GC content: 27.4

Gene sequence:

>489_bases
GTGGCTTTTATGGAAAAAATCTTTCCAGACATTTTAGAAGCAATAAGAAATGAAGAGATAATAAAAGAAAGTAAAAAAAT
TCCTATGCCATATTTTGGGTTGTTTGCATTGGTAATATTTGATAAAGTTAAAGAACTTGGTTCAGAAACCTCATTATATG
AAATTGGTGAAGAATTTGGAAAAATGTTATCTCCTAAAAATATTGAAGAATTGAAAAAAATATTCAAATTAATGAATTTT
GGAGATTTGGAGATTGACGAAAATAAAATACTTCTCAAAAATCCACCATATAAAATAAAGCTATCTAATCCTCCATACCA
ATGGGTATCTAAAGAAGAACCAATTCATGATTTTATAGCTGGAATCTTAGCTGGATGTTTAGAAGAGATATTTAAAAAGA
AATTTGTTGTTAATGAGGTTGAATGTGTTTCTCAAGGAAAAGATAAATGTGTGTTTGAAGTTAAGGAAGTTGATGAGCTA
AATAAATAA

Upstream 100 bases:

>100_bases
TAATATTTATTATTACAAAGTTTTATATATTTTGTTTTACATAGATGTTATTGATTAGGTCATAACACTAAATAATTAAA
AAATATATTAAAAAAGAAAG

Downstream 100 bases:

>100_bases
ATCAACCAACTGCATATCTTTAACCAAACCTTTATCAGTTATTTTTAGCTCAGGAATCACAGGGAGAGAGAAAAAGCTCA
TACTTAAAAATGGGTTCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MAFMEKIFPDILEAIRNEEIIKESKKIPMPYFGLFALVIFDKVKELGSETSLYEIGEEFGKMLSPKNIEELKKIFKLMNF
GDLEIDENKILLKNPPYKIKLSNPPYQWVSKEEPIHDFIAGILAGCLEEIFKKKFVVNEVECVSQGKDKCVFEVKEVDEL
NK

Sequences:

>Translated_162_residues
MAFMEKIFPDILEAIRNEEIIKESKKIPMPYFGLFALVIFDKVKELGSETSLYEIGEEFGKMLSPKNIEELKKIFKLMNF
GDLEIDENKILLKNPPYKIKLSNPPYQWVSKEEPIHDFIAGILAGCLEEIFKKKFVVNEVECVSQGKDKCVFEVKEVDEL
NK
>Mature_161_residues
AFMEKIFPDILEAIRNEEIIKESKKIPMPYFGLFALVIFDKVKELGSETSLYEIGEEFGKMLSPKNIEELKKIFKLMNFG
DLEIDENKILLKNPPYKIKLSNPPYQWVSKEEPIHDFIAGILAGCLEEIFKKKFVVNEVECVSQGKDKCVFEVKEVDELN
K

Specific function: Unknown

COG id: COG1719

COG function: function code R; Predicted hydrocarbon binding protein (contains V4R domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the M.jannaschii MJ0150/MJ0739/MJ0745/MJ1460/MJ1642 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1460_METJA (Q58855)

Other databases:

- EMBL:   L77117
- PIR:   C64482
- RefSeq:   NP_248464.1
- PDB:   2OSD
- PDB:   2OSO
- PDBsum:   2OSD
- PDBsum:   2OSO
- ProteinModelPortal:   Q58855
- SMR:   Q58855
- GeneID:   1452364
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1460
- NMPDR:   fig|243232.1.peg.1501
- TIGR:   MJ1460
- HOGENOM:   HBG538985
- OMA:   FALVIFD
- ProtClustDB:   CLSK2517734
- BioCyc:   MJAN243232:MJ_1460-MONOMER
- InterPro:   IPR004096

Pfam domain/function: PF02830 V4R

EC number: NA

Molecular weight: Translated: 18783; Mature: 18652

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFMEKIFPDILEAIRNEEIIKESKKIPMPYFGLFALVIFDKVKELGSETSLYEIGEEFG
CCHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
KMLSPKNIEELKKIFKLMNFGDLEIDENKILLKNPPYKIKLSNPPYQWVSKEEPIHDFIA
HHCCCCCHHHHHHHHHHHCCCCCEECCCEEEEECCCEEEEECCCCHHHCCCCCCHHHHHH
GILAGCLEEIFKKKFVVNEVECVSQGKDKCVFEVKEVDELNK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
AFMEKIFPDILEAIRNEEIIKESKKIPMPYFGLFALVIFDKVKELGSETSLYEIGEEFG
CHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
KMLSPKNIEELKKIFKLMNFGDLEIDENKILLKNPPYKIKLSNPPYQWVSKEEPIHDFIA
HHCCCCCHHHHHHHHHHHCCCCCEECCCEEEEECCCEEEEECCCCHHHCCCCCCHHHHHH
GILAGCLEEIFKKKFVVNEVECVSQGKDKCVFEVKEVDELNK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087