| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669646
Identifier: 15669646
GI number: 15669646
Start: 1424721
End: 1425638
Strand: Reverse
Name: 15669646
Synonym: MJ1455
Alternate gene names: NA
Gene position: 1425638-1424721 (Counterclockwise)
Preceding gene: 15669651
Following gene: 15669645
Centisome position: 85.63
GC content: 35.4
Gene sequence:
>918_bases ATGATACTCTTCGAGTGGGGAACTTATAACGCTTTATCAACATTAAAACAGGCAGCATTATTGGGGACAAGAATTACAGA AATTCCACCAGCAGTGTTATCAAGAAGATTGCCATCCGGATACTATGAGAGTTATAAAAAGTTAGGTGGGGAGTATTTCA CATCAATCTTAGCTCATGGGCCTTATTATAGCTTATCATCAGAGAAGGGATTGAAAGGTCATCTTTCAGCCATAGAAAAA GCTACACTATGTGGAGCTGAGATATACAACTACCATCTTGGAAAAAGAGTGGGGGATGATTTAAACTACCACTTAGAAGT CTTAAAAAAATTCAGTGAAGTTAATAATGAGATGATTTACTCTCCAGAGCCAGCAACAAATATTGGAGAGTTTGGAACAT TAGATGAGCTTGAAGAGTTAATAAAAGCGGCTAAAGAGGAAGATATAAAAATTATTCCATCATTACAGTTAGAAAACATA TTCTTAAATGAATTGGGAGTTTATGAGAAGGATGATTTAGATGAAGCAGCTGAAAAGGCAGATGTTGATTGGTGGCTAAA GATTTTCAGAAGAATGGATAAAATATCAGATTATATAATGCATTTCAGATTTTCACAGGTTATTGGGCTTAAATATGGAA AGAGATTCTATAAGAAGAGAGTTCCTTTAGGAAAAGGGTATCCACCAGTTGAGCCATTAACTGAAGCTTTAGCTACATAC TTAGTAGATAACGCTACAAGAGGGGGATTTAAGAAAGTTCTATTTGTCTATACCGGATTGCCAGAGGTTAAGTATAGGGA TTTAATTGACTTGTATGCAATGATTATGAAGAAATCCATCGACAAGTTGATGAGTAGAGAGAGCCAGGTTGAATATGGCG ATTTCTATAAAGTTATGAGTTCAGAAGAGGAAGAATAA
Upstream 100 bases:
>100_bases TTAATTATCATTCCAGTCACCATAGATTTTTAATTGACAAAGTTTATATATAGTCAGTGCTTATATTATTTACTGTATAA GAAAAAATCAAGGTGAGAAA
Downstream 100 bases:
>100_bases ATTTTCTATTTTTTAGCTTAATTTTATATTGCATTAAATTTAAAATATTTTGCTTTTTAATTTTTAATTAAATAAAACTT TTAAGGGGAGAGAATATGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MILFEWGTYNALSTLKQAALLGTRITEIPPAVLSRRLPSGYYESYKKLGGEYFTSILAHGPYYSLSSEKGLKGHLSAIEK ATLCGAEIYNYHLGKRVGDDLNYHLEVLKKFSEVNNEMIYSPEPATNIGEFGTLDELEELIKAAKEEDIKIIPSLQLENI FLNELGVYEKDDLDEAAEKADVDWWLKIFRRMDKISDYIMHFRFSQVIGLKYGKRFYKKRVPLGKGYPPVEPLTEALATY LVDNATRGGFKKVLFVYTGLPEVKYRDLIDLYAMIMKKSIDKLMSRESQVEYGDFYKVMSSEEEE
Sequences:
>Translated_305_residues MILFEWGTYNALSTLKQAALLGTRITEIPPAVLSRRLPSGYYESYKKLGGEYFTSILAHGPYYSLSSEKGLKGHLSAIEK ATLCGAEIYNYHLGKRVGDDLNYHLEVLKKFSEVNNEMIYSPEPATNIGEFGTLDELEELIKAAKEEDIKIIPSLQLENI FLNELGVYEKDDLDEAAEKADVDWWLKIFRRMDKISDYIMHFRFSQVIGLKYGKRFYKKRVPLGKGYPPVEPLTEALATY LVDNATRGGFKKVLFVYTGLPEVKYRDLIDLYAMIMKKSIDKLMSRESQVEYGDFYKVMSSEEEE >Mature_305_residues MILFEWGTYNALSTLKQAALLGTRITEIPPAVLSRRLPSGYYESYKKLGGEYFTSILAHGPYYSLSSEKGLKGHLSAIEK ATLCGAEIYNYHLGKRVGDDLNYHLEVLKKFSEVNNEMIYSPEPATNIGEFGTLDELEELIKAAKEEDIKIIPSLQLENI FLNELGVYEKDDLDEAAEKADVDWWLKIFRRMDKISDYIMHFRFSQVIGLKYGKRFYKKRVPLGKGYPPVEPLTEALATY LVDNATRGGFKKVLFVYTGLPEVKYRDLIDLYAMIMKKSIDKLMSRESQVEYGDFYKVMSSEEEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1455_METJA (Q58850)
Other databases:
- EMBL: L77117 - PIR: F64481 - RefSeq: NP_248459.1 - ProteinModelPortal: Q58850 - GeneID: 1452359 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1455 - NMPDR: fig|243232.1.peg.1496 - TIGR: MJ1455 - HOGENOM: HBG508655 - OMA: NIGEFGT - ProtClustDB: CLSK876584 - BioCyc: MJAN243232:MJ_1455-MONOMER - InterPro: IPR013022 - Gene3D: G3DSA:3.20.20.150
Pfam domain/function: SSF51658 Xyl_isomerase-like_TIM-brl
EC number: NA
Molecular weight: Translated: 35010; Mature: 35010
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILFEWGTYNALSTLKQAALLGTRITEIPPAVLSRRLPSGYYESYKKLGGEYFTSILAHG CEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC PYYSLSSEKGLKGHLSAIEKATLCGAEIYNYHLGKRVGDDLNYHLEVLKKFSEVNNEMIY CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEE SPEPATNIGEFGTLDELEELIKAAKEEDIKIIPSLQLENIFLNELGVYEKDDLDEAAEKA CCCCCCCCCCCCCHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHCCCCCCCCHHHHHHHC DVDWWLKIFRRMDKISDYIMHFRFSQVIGLKYGKRFYKKRVPLGKGYPPVEPLTEALATY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH LVDNATRGGFKKVLFVYTGLPEVKYRDLIDLYAMIMKKSIDKLMSRESQVEYGDFYKVMS HHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC SEEEE CCCCC >Mature Secondary Structure MILFEWGTYNALSTLKQAALLGTRITEIPPAVLSRRLPSGYYESYKKLGGEYFTSILAHG CEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC PYYSLSSEKGLKGHLSAIEKATLCGAEIYNYHLGKRVGDDLNYHLEVLKKFSEVNNEMIY CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEE SPEPATNIGEFGTLDELEELIKAAKEEDIKIIPSLQLENIFLNELGVYEKDDLDEAAEKA CCCCCCCCCCCCCHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHCCCCCCCCHHHHHHHC DVDWWLKIFRRMDKISDYIMHFRFSQVIGLKYGKRFYKKRVPLGKGYPPVEPLTEALATY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH LVDNATRGGFKKVLFVYTGLPEVKYRDLIDLYAMIMKKSIDKLMSRESQVEYGDFYKVMS HHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC SEEEE CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087