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The map label for this gene is mjaIIR

Identifier: 15669640

GI number: 15669640

Start: 1418572

End: 1419684

Strand: Direct

Name: mjaIIR

Synonym: MJ1449

Alternate gene names: 15669640

Gene position: 1418572-1419684 (Clockwise)

Preceding gene: 15669639

Following gene: 15669641

Centisome position: 85.2

GC content: 26.59

Gene sequence:

>1113_bases
ATGCCACTAAGTAAAAATGTTATAGAAAAAATTAGCATTGAGACAATAAGAGTATTAAAATCAAGATTTGATACAATATC
AGATGAAGACATAAAAATAAGAAACATGCCATTCCATATGGCTTTTTTAAGGGCTTTTTATGGGAAGATTGGGATAAACG
ATGATACTGAAGCATTAAAGTTTTTAACTTTATCACAGTGGTTTCATGGATTAAGCACAACATTGGGGCAGAGCTACTTT
GAAAATATTGCTCATATTTTATCTAACGGTGAAAAAAGGACATTTAAAAACTATAAAATTAAAAGAAGTGTTAGAGACAA
AATATCGGAGATTATAAATGATTTAAAAAGTGGAGAAAGATTGCCAAATGTGGAAAAAGAAAATAAAGAATTAAGAGAAG
CTACTTCAAAAAATTCTGAATATGTAAATGGGTTAGAATTTACTGCAGATGTTTATTTTGAAGATAAAGATAAAGTTGTA
ATGATTGAGTTAAAAACTGTTAGACCTAATGCTGGAGAAATGAGAGGAGAAAAACAAAAAATTCTTTATGGAAAAGCCTA
TATGATGGAAACAAAACCAAATAAAAAAGTTTATTATTTTATTGGCTTTCCCTATGACCCTACTGAAAATCCAGAAAATC
CTTGTGGATATGATAAAGATAGATTCATGAGTAGTTTAATAGAATTTTCCAAGTATTTTGATAAAAGAGAGGTTTTAATT
GCAGAAGAATTGTGGAGTTTTTTATCTGGAGAAGAAAATACTATGAAAAAAATATTGGATATTATTAATTCAATAGCAAA
ACCTGATTTTAAAGAAAAGTTTGATTTTATAAATACATTTCCATTCATTAATCAAGATAGATTATACACCAAAGATGCTA
TTGATGAACAAAAATTCAAAAAATATATGGATATCCTTCAAGAATGGAGACTTTATTCTGAAATTGAATGTGCAAAAGCT
GTAAAAGAGCTGAGTTTATTAAAATTATCTTCAAGAGATAGAAGAACTTTTGAAAGATTGATTAATAACTCAATGTTTAG
TAATAACAACAAGTATAATGAAAATAGGAAGATGAAAATATTAGAATTATACAATAAATATATGCAAAAATAG

Upstream 100 bases:

>100_bases
TTTTAGTTAGAGAGTTTAAAAGACCGGTCTTAAATAGAACAGAAAGAGATAGAAACCCATACTATGAAAGCATCTTTGAA
TTAAAAATGGAGGAATAGCT

Downstream 100 bases:

>100_bases
GGATTAGCCATGTATGATTTTGCCATTATCGGCTCTGGAGTGGCTGGAGCCACCTTAGCCAAGGAATTGAGATATAGGTA
TAAAGTGGCAGTAATAGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: R.MjaII; Endonuclease MjaII; Type II restriction enzyme MjaII

Number of amino acids: Translated: 370; Mature: 369

Protein sequence:

>370_residues
MPLSKNVIEKISIETIRVLKSRFDTISDEDIKIRNMPFHMAFLRAFYGKIGINDDTEALKFLTLSQWFHGLSTTLGQSYF
ENIAHILSNGEKRTFKNYKIKRSVRDKISEIINDLKSGERLPNVEKENKELREATSKNSEYVNGLEFTADVYFEDKDKVV
MIELKTVRPNAGEMRGEKQKILYGKAYMMETKPNKKVYYFIGFPYDPTENPENPCGYDKDRFMSSLIEFSKYFDKREVLI
AEELWSFLSGEENTMKKILDIINSIAKPDFKEKFDFINTFPFINQDRLYTKDAIDEQKFKKYMDILQEWRLYSEIECAKA
VKELSLLKLSSRDRRTFERLINNSMFSNNNKYNENRKMKILELYNKYMQK

Sequences:

>Translated_370_residues
MPLSKNVIEKISIETIRVLKSRFDTISDEDIKIRNMPFHMAFLRAFYGKIGINDDTEALKFLTLSQWFHGLSTTLGQSYF
ENIAHILSNGEKRTFKNYKIKRSVRDKISEIINDLKSGERLPNVEKENKELREATSKNSEYVNGLEFTADVYFEDKDKVV
MIELKTVRPNAGEMRGEKQKILYGKAYMMETKPNKKVYYFIGFPYDPTENPENPCGYDKDRFMSSLIEFSKYFDKREVLI
AEELWSFLSGEENTMKKILDIINSIAKPDFKEKFDFINTFPFINQDRLYTKDAIDEQKFKKYMDILQEWRLYSEIECAKA
VKELSLLKLSSRDRRTFERLINNSMFSNNNKYNENRKMKILELYNKYMQK
>Mature_369_residues
PLSKNVIEKISIETIRVLKSRFDTISDEDIKIRNMPFHMAFLRAFYGKIGINDDTEALKFLTLSQWFHGLSTTLGQSYFE
NIAHILSNGEKRTFKNYKIKRSVRDKISEIINDLKSGERLPNVEKENKELREATSKNSEYVNGLEFTADVYFEDKDKVVM
IELKTVRPNAGEMRGEKQKILYGKAYMMETKPNKKVYYFIGFPYDPTENPENPCGYDKDRFMSSLIEFSKYFDKREVLIA
EELWSFLSGEENTMKKILDIINSIAKPDFKEKFDFINTFPFINQDRLYTKDAIDEQKFKKYMDILQEWRLYSEIECAKAV
KELSLLKLSSRDRRTFERLINNSMFSNNNKYNENRKMKILELYNKYMQK

Specific function: Recognizes the double-stranded sequence GGNCC

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): T2M2_METJA (Q58844)

Other databases:

- EMBL:   L77117
- PIR:   H64480
- RefSeq:   NP_248453.1
- REBASE:   1222
- GeneID:   1452353
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1449
- NMPDR:   fig|243232.1.peg.1490
- TIGR:   MJ1449
- OMA:   SIETIRV
- ProtClustDB:   CLSK2517732
- BioCyc:   MJAN243232:MJ_1449-MONOMER
- BRENDA:   3.1.21.4
- InterPro:   IPR019045

Pfam domain/function: PF09520 RE_MjaII

EC number: =3.1.21.4

Molecular weight: Translated: 43912; Mature: 43781

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLSKNVIEKISIETIRVLKSRFDTISDEDIKIRNMPFHMAFLRAFYGKIGINDDTEALK
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCHHHHH
FLTLSQWFHGLSTTLGQSYFENIAHILSNGEKRTFKNYKIKRSVRDKISEIINDLKSGER
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LPNVEKENKELREATSKNSEYVNGLEFTADVYFEDKDKVVMIELKTVRPNAGEMRGEKQK
CCCCCHHHHHHHHHHCCCCHHHCCEEEEEEEEECCCCCEEEEEEEEECCCCHHHCCCHHH
ILYGKAYMMETKPNKKVYYFIGFPYDPTENPENPCGYDKDRFMSSLIEFSKYFDKREVLI
EEECCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AEELWSFLSGEENTMKKILDIINSIAKPDFKEKFDFINTFPFINQDRLYTKDAIDEQKFK
HHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHH
KYMDILQEWRLYSEIECAKAVKELSLLKLSSRDRRTFERLINNSMFSNNNKYNENRKMKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHCCCCCCCCCCHHHHH
LELYNKYMQK
HHHHHHHHCC
>Mature Secondary Structure 
PLSKNVIEKISIETIRVLKSRFDTISDEDIKIRNMPFHMAFLRAFYGKIGINDDTEALK
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCHHHHH
FLTLSQWFHGLSTTLGQSYFENIAHILSNGEKRTFKNYKIKRSVRDKISEIINDLKSGER
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LPNVEKENKELREATSKNSEYVNGLEFTADVYFEDKDKVVMIELKTVRPNAGEMRGEKQK
CCCCCHHHHHHHHHHCCCCHHHCCEEEEEEEEECCCCCEEEEEEEEECCCCHHHCCCHHH
ILYGKAYMMETKPNKKVYYFIGFPYDPTENPENPCGYDKDRFMSSLIEFSKYFDKREVLI
EEECCEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
AEELWSFLSGEENTMKKILDIINSIAKPDFKEKFDFINTFPFINQDRLYTKDAIDEQKFK
HHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHH
KYMDILQEWRLYSEIECAKAVKELSLLKLSSRDRRTFERLINNSMFSNNNKYNENRKMKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHCCCCCCCCCCHHHHH
LELYNKYMQK
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087