| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is mjaIIM
Identifier: 15669639
GI number: 15669639
Start: 1416977
End: 1418569
Strand: Direct
Name: mjaIIM
Synonym: MJ1448
Alternate gene names: 15669639
Gene position: 1416977-1418569 (Clockwise)
Preceding gene: 15669638
Following gene: 15669640
Centisome position: 85.11
GC content: 27.87
Gene sequence:
>1593_bases ATGAATCTGGATGCATGGTTAGATATACAGCCAGCAAAAAAACTTTACACAATAAAAGAGGCATCAAGAATATTAACAAA AAAGTTTGGTAAGGAAATTAAAGAGCATAATATTTCATATTTAGTGCAGTATGGAAGAGTCAATAAGTATAAAATCAAAA ATAGGGTTTATGTAGATATTGATGAGGTTGAAAACTATTATAAAAAATTATTTTTTGAAAAAAGAAAAGAATGGGAAGAA AAATTGGGATTTAAATTGGATTGGGATTTAGCATTTGATTTGTTATCTGAGAAGGAGAGAACTAAACATGTTCATGGAAT TCACCCATACAAAGGAAAGTTTATTCCACAATTGGTAGAGTATTTTTTAAAGAGGCATTTTAACGTTGGAGATATTATAA TAGACCCGTTTATGGGTTCTGGAACAACATTAGTGCAATGTATGGAGATGGGCATTAATTCTATTGGCATTGATATATCA CCATTTAACTGTTTAATTGCTGAAGTTAAATTGCAGAAATATGATATTCAAAAATTAAAGAAAATTTTATTAGATATGCT AAATAAAACAAAGGAATTTTCAAAAAATTTAGGAGATGATGAATTTGTTAAAGAAATGGATAAATTAATTGAGAAATACA ACAAAAAATACTTTACCTTAGAATATAAAAGAAAATTATCAAAAAAAGAAATTGATGAAGATAGCTATTCCGAAAAAATC ATGGAAATGTTTTATTTAGAGTATAAAAAACTTAAGGAAAAATACTGCAAAAATGATGATGAGTTTGATGACATTTTTAA AGATAAGCCATTTTTATATAAGTGGTATTCTCCAAGAATTAGGGCAGAATTAAACTTTTATTTAAATTTAATTAAAGACT GCAGAGATGAAACAATAAAAAAAGTGGCAATGATAATTTTGAGTAGAACGGCAAGGTCTGTTAGAGGAACTACTCATTTT GATTTAGCCACACTAAAAGAGCCAGTTTTTGACCCATACTATTGCTATAAGCATAAAAAAATTTGCAGACCAGTTCAAAC AATTTTAAGACACTTAGAAGAATATACAAATGATGTAATTAGTAGAATAGAAGAATTTTCAAAGATTAGGAAAGATGCAT ATTATTTAATCATTAATGGAGATTCAAGGACTGTTGATATTGAAGAAGAACTAAAAAAACACCCAAACTTTTATGAACTT TATAAAAACAAAAAAATTGATGGTATTTTTACATCTCCTCCTTATTTAGGGCAGATTGATTATCATGAGCAGCATGCCTA TGCTTATGAGCTTTTTGACATTCCAAGATTGGATGAGTTGGAGATAGGACCTAAATTTAAAGGTAGTTCAAAAAAAGCAC AAAAAGAGTATATTGAAGGCATATCCGATGTTTTAATCAACATGAAAAGATTTTTAAATGAAGACGCAAAGATTTTCATT GTAGTTAATGATAAAAAGAACCTATATAAAGAGATTTTTGAGAAAAGTGGGCTTATTTTAGTTAGAGAGTTTAAAAGACC GGTCTTAAATAGAACAGAAAGAGATAGAAACCCATACTATGAAAGCATCTTTGAATTAAAAATGGAGGAATAG
Upstream 100 bases:
>100_bases ACCCAGGAAGAGTAATTAGGATGTTTATAAACAAGATGGGTTATGATATAGACACTTATAGGCTTTATTTTGATGAGGAT GAGGATATAGGGGAGGAATT
Downstream 100 bases:
>100_bases CTATGCCACTAAGTAAAAATGTTATAGAAAAAATTAGCATTGAGACAATAAGAGTATTAAAATCAAGATTTGATACAATA TCAGATGAAGACATAAAAAT
Product: type II R/M system modification methyltransferase
Products: NA
Alternate protein names: M.MjaII; N-4 cytosine-specific methyltransferase MjaII
Number of amino acids: Translated: 530; Mature: 530
Protein sequence:
>530_residues MNLDAWLDIQPAKKLYTIKEASRILTKKFGKEIKEHNISYLVQYGRVNKYKIKNRVYVDIDEVENYYKKLFFEKRKEWEE KLGFKLDWDLAFDLLSEKERTKHVHGIHPYKGKFIPQLVEYFLKRHFNVGDIIIDPFMGSGTTLVQCMEMGINSIGIDIS PFNCLIAEVKLQKYDIQKLKKILLDMLNKTKEFSKNLGDDEFVKEMDKLIEKYNKKYFTLEYKRKLSKKEIDEDSYSEKI MEMFYLEYKKLKEKYCKNDDEFDDIFKDKPFLYKWYSPRIRAELNFYLNLIKDCRDETIKKVAMIILSRTARSVRGTTHF DLATLKEPVFDPYYCYKHKKICRPVQTILRHLEEYTNDVISRIEEFSKIRKDAYYLIINGDSRTVDIEEELKKHPNFYEL YKNKKIDGIFTSPPYLGQIDYHEQHAYAYELFDIPRLDELEIGPKFKGSSKKAQKEYIEGISDVLINMKRFLNEDAKIFI VVNDKKNLYKEIFEKSGLILVREFKRPVLNRTERDRNPYYESIFELKMEE
Sequences:
>Translated_530_residues MNLDAWLDIQPAKKLYTIKEASRILTKKFGKEIKEHNISYLVQYGRVNKYKIKNRVYVDIDEVENYYKKLFFEKRKEWEE KLGFKLDWDLAFDLLSEKERTKHVHGIHPYKGKFIPQLVEYFLKRHFNVGDIIIDPFMGSGTTLVQCMEMGINSIGIDIS PFNCLIAEVKLQKYDIQKLKKILLDMLNKTKEFSKNLGDDEFVKEMDKLIEKYNKKYFTLEYKRKLSKKEIDEDSYSEKI MEMFYLEYKKLKEKYCKNDDEFDDIFKDKPFLYKWYSPRIRAELNFYLNLIKDCRDETIKKVAMIILSRTARSVRGTTHF DLATLKEPVFDPYYCYKHKKICRPVQTILRHLEEYTNDVISRIEEFSKIRKDAYYLIINGDSRTVDIEEELKKHPNFYEL YKNKKIDGIFTSPPYLGQIDYHEQHAYAYELFDIPRLDELEIGPKFKGSSKKAQKEYIEGISDVLINMKRFLNEDAKIFI VVNDKKNLYKEIFEKSGLILVREFKRPVLNRTERDRNPYYESIFELKMEE >Mature_530_residues MNLDAWLDIQPAKKLYTIKEASRILTKKFGKEIKEHNISYLVQYGRVNKYKIKNRVYVDIDEVENYYKKLFFEKRKEWEE KLGFKLDWDLAFDLLSEKERTKHVHGIHPYKGKFIPQLVEYFLKRHFNVGDIIIDPFMGSGTTLVQCMEMGINSIGIDIS PFNCLIAEVKLQKYDIQKLKKILLDMLNKTKEFSKNLGDDEFVKEMDKLIEKYNKKYFTLEYKRKLSKKEIDEDSYSEKI MEMFYLEYKKLKEKYCKNDDEFDDIFKDKPFLYKWYSPRIRAELNFYLNLIKDCRDETIKKVAMIILSRTARSVRGTTHF DLATLKEPVFDPYYCYKHKKICRPVQTILRHLEEYTNDVISRIEEFSKIRKDAYYLIINGDSRTVDIEEELKKHPNFYEL YKNKKIDGIFTSPPYLGQIDYHEQHAYAYELFDIPRLDELEIGPKFKGSSKKAQKEYIEGISDVLINMKRFLNEDAKIFI VVNDKKNLYKEIFEKSGLILVREFKRPVLNRTERDRNPYYESIFELKMEE
Specific function: This methylase recognizes the double-stranded sequence GGNC, causes specific methylation on C-4 on both strands, and protects the DNA from cleavage by the MjaII endonuclease (Potential)
COG id: COG0863
COG function: function code L; DNA modification methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family. N(4) subfamily
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MTM2_METJA (Q58843)
Other databases:
- EMBL: L77117 - PIR: G64480 - RefSeq: NP_248452.1 - ProteinModelPortal: Q58843 - SMR: Q58843 - REBASE: 3896 - GeneID: 1452352 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1448 - NMPDR: fig|243232.1.peg.1489 - TIGR: MJ1448 - HOGENOM: HBG615333 - OMA: IDYHEQH - ProtClustDB: CLSK796871 - BioCyc: MJAN243232:MJ_1448-MONOMER - BRENDA: 2.1.1.113 - InterPro: IPR002941 - InterPro: IPR017985 - InterPro: IPR001091 - PRINTS: PR00508
Pfam domain/function: PF01555 N6_N4_Mtase
EC number: =2.1.1.113
Molecular weight: Translated: 63756; Mature: 63756
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: PS00093 N4_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLDAWLDIQPAKKLYTIKEASRILTKKFGKEIKEHNISYLVQYGRVNKYKIKNRVYVDI CCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEECCEEEEEH DEVENYYKKLFFEKRKEWEEKLGFKLDWDLAFDLLSEKERTKHVHGIHPYKGKFIPQLVE HHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH YFLKRHFNVGDIIIDPFMGSGTTLVQCMEMGINSIGIDISPFNCLIAEVKLQKYDIQKLK HHHHHCCCCCCEEECCCCCCCHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHH KILLDMLNKTKEFSKNLGDDEFVKEMDKLIEKYNKKYFTLEYKRKLSKKEIDEDSYSEKI HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCCHHHHHHH MEMFYLEYKKLKEKYCKNDDEFDDIFKDKPFLYKWYSPRIRAELNFYLNLIKDCRDETIK HHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHH KVAMIILSRTARSVRGTTHFDLATLKEPVFDPYYCYKHKKICRPVQTILRHLEEYTNDVI HHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRIEEFSKIRKDAYYLIINGDSRTVDIEEELKKHPNFYELYKNKKIDGIFTSPPYLGQID HHHHHHHHHCCCEEEEEEECCCCEEEHHHHHHHCCCHHHHHHCCCCCEEECCCCCCCCCC YHEQHAYAYELFDIPRLDELEIGPKFKGSSKKAQKEYIEGISDVLINMKRFLNEDAKIFI CCHHHHHEEHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE VVNDKKNLYKEIFEKSGLILVREFKRPVLNRTERDRNPYYESIFELKMEE EECCCHHHHHHHHHCCCEEEEHHHHHHHHCCHHCCCCHHHHHHHHHHCCC >Mature Secondary Structure MNLDAWLDIQPAKKLYTIKEASRILTKKFGKEIKEHNISYLVQYGRVNKYKIKNRVYVDI CCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEECCEEEEEH DEVENYYKKLFFEKRKEWEEKLGFKLDWDLAFDLLSEKERTKHVHGIHPYKGKFIPQLVE HHHHHHHHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH YFLKRHFNVGDIIIDPFMGSGTTLVQCMEMGINSIGIDISPFNCLIAEVKLQKYDIQKLK HHHHHCCCCCCEEECCCCCCCHHHHHHHHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHH KILLDMLNKTKEFSKNLGDDEFVKEMDKLIEKYNKKYFTLEYKRKLSKKEIDEDSYSEKI HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCCCCHHHHHHH MEMFYLEYKKLKEKYCKNDDEFDDIFKDKPFLYKWYSPRIRAELNFYLNLIKDCRDETIK HHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHH KVAMIILSRTARSVRGTTHFDLATLKEPVFDPYYCYKHKKICRPVQTILRHLEEYTNDVI HHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRIEEFSKIRKDAYYLIINGDSRTVDIEEELKKHPNFYELYKNKKIDGIFTSPPYLGQID HHHHHHHHHCCCEEEEEEECCCCEEEHHHHHHHCCCHHHHHHCCCCCEEECCCCCCCCCC YHEQHAYAYELFDIPRLDELEIGPKFKGSSKKAQKEYIEGISDVLINMKRFLNEDAKIFI CCHHHHHEEHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE VVNDKKNLYKEIFEKSGLILVREFKRPVLNRTERDRNPYYESIFELKMEE EECCCHHHHHHHHHCCCEEEEHHHHHHHHCCHHCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087