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The map label for this gene is 15669630

Identifier: 15669630

GI number: 15669630

Start: 1406528

End: 1407151

Strand: Direct

Name: 15669630

Synonym: MJ1439

Alternate gene names: NA

Gene position: 1406528-1407151 (Clockwise)

Preceding gene: 15669629

Following gene: 15669631

Centisome position: 84.48

GC content: 30.29

Gene sequence:

>624_bases
ATGATTAGAGGGAGGATTATGAGAAAATTCCTAATACTATCTATGTTAATCTTCACAACTCTATGTGGCTGTGTTGATTT
CTCATCCTCTAATTCTAACGGTTATTATCATGATAGTTGGAGTTATAATAATTACACTTCTTTTGTAGATACTCATGAAC
ACTACTACGGAAAGGTTGTTAAGGTTGTAGATGGAGACACTGTTTATGTTGAAGTTAATGGGGAATTATGGAAGATTAGG
CTTTTAGGGGTAGATACTCCAGAAATTCACAAGAGAAACAACCCGTATGAATATTATTTATTAAATGGAACACCGATAAC
AGATACAAAATACTTAAAAGAATGGGGCTATAAAGCTAAGCATTTTGCAGAAAAAGAACTTAAAAATAAAACAGTTATAA
TTGTCTTTGATAATGAAGCCCCAAAGAAAGATAAATATGGGAGATATTTAGCATACATCTTTATAAATAATAGTAATAAT
TTAATAAACTTCAATGAAGAGCTTTTAAAGTATGGATATGCAAGGGTTTATATAAGTAATTTTGAGTTAAAGGATGAATT
CTTAAATGTTGAGAGGGAAGCTAAAGAAAATAGAGTGGGTTTATGGAATTGGAGCAATAACTAA

Upstream 100 bases:

>100_bases
GGAGATGTTTTAGGAGCTTCAAATGAAATAACAAGAGTTGTTGTTTTATTATCAATTATAGCAAGTATTAAAGTATTTAG
TATATATTTATTAGGTTAAA

Downstream 100 bases:

>100_bases
GGGGAGTTTTATGGAAGGGAGAACTTATGCATTATCATGAACCTTTAATAAAGGTTCATCAAAATGAGTGGGGCTTCACT
TCGTTCAGCTCCACTTTATT

Product: thermonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MIRGRIMRKFLILSMLIFTTLCGCVDFSSSNSNGYYHDSWSYNNYTSFVDTHEHYYGKVVKVVDGDTVYVEVNGELWKIR
LLGVDTPEIHKRNNPYEYYLLNGTPITDTKYLKEWGYKAKHFAEKELKNKTVIIVFDNEAPKKDKYGRYLAYIFINNSNN
LINFNEELLKYGYARVYISNFELKDEFLNVEREAKENRVGLWNWSNN

Sequences:

>Translated_207_residues
MIRGRIMRKFLILSMLIFTTLCGCVDFSSSNSNGYYHDSWSYNNYTSFVDTHEHYYGKVVKVVDGDTVYVEVNGELWKIR
LLGVDTPEIHKRNNPYEYYLLNGTPITDTKYLKEWGYKAKHFAEKELKNKTVIIVFDNEAPKKDKYGRYLAYIFINNSNN
LINFNEELLKYGYARVYISNFELKDEFLNVEREAKENRVGLWNWSNN
>Mature_207_residues
MIRGRIMRKFLILSMLIFTTLCGCVDFSSSNSNGYYHDSWSYNNYTSFVDTHEHYYGKVVKVVDGDTVYVEVNGELWKIR
LLGVDTPEIHKRNNPYEYYLLNGTPITDTKYLKEWGYKAKHFAEKELKNKTVIIVFDNEAPKKDKYGRYLAYIFINNSNN
LINFNEELLKYGYARVYISNFELKDEFLNVEREAKENRVGLWNWSNN

Specific function: Unknown

COG id: COG1525

COG function: function code L; Micrococcal nuclease (thermonuclease) homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thermonuclease family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1439_METJA (Q58834)

Other databases:

- EMBL:   L77117
- PIR:   F64479
- RefSeq:   NP_248443.1
- ProteinModelPortal:   Q58834
- SMR:   Q58834
- GeneID:   1452343
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1439
- NMPDR:   fig|243232.1.peg.1480
- TIGR:   MJ1439
- HOGENOM:   HBG752546
- OMA:   LARVFYE
- ProtClustDB:   CLSK2749995
- BioCyc:   MJAN243232:MJ_1439-MONOMER
- InterPro:   IPR016071
- InterPro:   IPR006021
- InterPro:   IPR002071
- Gene3D:   G3DSA:2.40.50.90
- SMART:   SM00318

Pfam domain/function: PF00565 SNase; SSF50199 Staphylococal_nuclease_OB-fold

EC number: NA

Molecular weight: Translated: 24547; Mature: 24547

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS01123 TNASE_1; PS01284 TNASE_2; PS50830 TNASE_3; PS00013 PROKAR_LIPOPROTEIN

Important sites: ACT_SITE 80-80 ACT_SITE 88-88 ACT_SITE 148-148

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRGRIMRKFLILSMLIFTTLCGCVDFSSSNSNGYYHDSWSYNNYTSFVDTHEHYYGKVV
CCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEECCCCCCCCCCEEECCCHHCEEEE
KVVDGDTVYVEVNGELWKIRLLGVDTPEIHKRNNPYEYYLLNGTPITDTKYLKEWGYKAK
EEECCCEEEEEECCCEEEEEEEECCCHHHHCCCCCEEEEEECCCCCCCHHHHHHCCCCHH
HFAEKELKNKTVIIVFDNEAPKKDKYGRYLAYIFINNSNNLINFNEELLKYGYARVYISN
HHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCCEEECCHHHHHCCEEEEEEEC
FELKDEFLNVEREAKENRVGLWNWSNN
CEECHHHHCCHHHHCCCCEEEEEECCC
>Mature Secondary Structure
MIRGRIMRKFLILSMLIFTTLCGCVDFSSSNSNGYYHDSWSYNNYTSFVDTHEHYYGKVV
CCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEECCCCCCCCCCEEECCCHHCEEEE
KVVDGDTVYVEVNGELWKIRLLGVDTPEIHKRNNPYEYYLLNGTPITDTKYLKEWGYKAK
EEECCCEEEEEECCCEEEEEEEECCCHHHHCCCCCEEEEEECCCCCCCHHHHHHCCCCHH
HFAEKELKNKTVIIVFDNEAPKKDKYGRYLAYIFINNSNNLINFNEELLKYGYARVYISN
HHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCCEEECCHHHHHCCEEEEEEEC
FELKDEFLNVEREAKENRVGLWNWSNN
CEECHHHHCCHHHHCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087