| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
Click here to switch to the map view.
The map label for this gene is 15669599
Identifier: 15669599
GI number: 15669599
Start: 1369931
End: 1370737
Strand: Reverse
Name: 15669599
Synonym: MJ1409
Alternate gene names: NA
Gene position: 1370737-1369931 (Counterclockwise)
Preceding gene: 15669600
Following gene: 15669593
Centisome position: 82.33
GC content: 26.27
Gene sequence:
>807_bases GTGGAAACAATGAAAGCAAAAGAATTAGCTCAAAAAATTTTATTAGATATTTACAGAAACTTAGATGAATTTTCAAAGGA TATAATTAGAGGAGATTTAGCAGATATTGAATTTAAAGGATTCTATCTAAAAGGAAAAAACGGAGAGAAGGCATATATTA GAAACTTAGATGACTTTGAAAATTTAAAAGATTTTGATGTAGAGATGAGAAAATACAAATTAAAAAGTATAAATTTAAAG AACTTAGATGAGGGTTTAATGATAATTAACTTATCTTCAAGGGTAAGTAAGGAATATAAGTTTGAAGCAAATGAATACTC AATAATCTACCCATCAAATAATACAACCATAGAGTTTAAAGAGAGAGTATTAAAATGGATGGAGTTAGAAGATGATGAAT TAGATGAAAAAATTATAGAGTTTGACACAAAGATGAACGAGATTCTTGAAGAGCTGTTGGAAGATGTTGAAGTTGAAGAA GAAATTTCTGTCTATATTGATGTATTTATGGATGTGAATAAAATAGAAAATTTTGTAGAAAAAGATGACGAAAGAATAAT AATCTGGATTCATCCTGTCTTTTTATTCTCAAACGATGATGTCTTAAGAGGACTTTTAGCTTATGAACTTTCAAGATTCA AAAGCAGATTCTTAGAAGTAGGTTATAAAGATATAATAAAATACTGCAGAGAATTAAAAAAACTAACCAACAAAAAACCA AAAGTTCTTGAAAAAATTAAAGATATTGCCAATAAATATGGAGATATAGACTCTTTAAACTTAATAAATGAAATTGAGAA TGAATAA
Upstream 100 bases:
>100_bases GAGGGTGGATAATAATTATCAAGAGTAACTACATAATACTAAAATTTATATTTATCCAAAATTAAATTTTACTATTAATT ATAATCTGAATTTTTAATAG
Downstream 100 bases:
>100_bases TTTAACATTCCAATTCTTTATTTTCCGCATCTTTATCCTTTAAAAATTCTTTTATAGCAATTTTTTTAAGCCTTTCTTTT AACTCATCCAATCCAATATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues METMKAKELAQKILLDIYRNLDEFSKDIIRGDLADIEFKGFYLKGKNGEKAYIRNLDDFENLKDFDVEMRKYKLKSINLK NLDEGLMIINLSSRVSKEYKFEANEYSIIYPSNNTTIEFKERVLKWMELEDDELDEKIIEFDTKMNEILEELLEDVEVEE EISVYIDVFMDVNKIENFVEKDDERIIIWIHPVFLFSNDDVLRGLLAYELSRFKSRFLEVGYKDIIKYCRELKKLTNKKP KVLEKIKDIANKYGDIDSLNLINEIENE
Sequences:
>Translated_268_residues METMKAKELAQKILLDIYRNLDEFSKDIIRGDLADIEFKGFYLKGKNGEKAYIRNLDDFENLKDFDVEMRKYKLKSINLK NLDEGLMIINLSSRVSKEYKFEANEYSIIYPSNNTTIEFKERVLKWMELEDDELDEKIIEFDTKMNEILEELLEDVEVEE EISVYIDVFMDVNKIENFVEKDDERIIIWIHPVFLFSNDDVLRGLLAYELSRFKSRFLEVGYKDIIKYCRELKKLTNKKP KVLEKIKDIANKYGDIDSLNLINEIENE >Mature_268_residues METMKAKELAQKILLDIYRNLDEFSKDIIRGDLADIEFKGFYLKGKNGEKAYIRNLDDFENLKDFDVEMRKYKLKSINLK NLDEGLMIINLSSRVSKEYKFEANEYSIIYPSNNTTIEFKERVLKWMELEDDELDEKIIEFDTKMNEILEELLEDVEVEE EISVYIDVFMDVNKIENFVEKDDERIIIWIHPVFLFSNDDVLRGLLAYELSRFKSRFLEVGYKDIIKYCRELKKLTNKKP KVLEKIKDIANKYGDIDSLNLINEIENE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1409_METJA (Q58804)
Other databases:
- EMBL: L77117 - PIR: H64475 - RefSeq: NP_248412.1 - ProteinModelPortal: Q58804 - GeneID: 1452312 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1409 - NMPDR: fig|243232.1.peg.1449 - TIGR: MJ1409 - HOGENOM: HBG538980 - OMA: VYIDVFM - ProtClustDB: CLSK876563 - BioCyc: MJAN243232:MJ_1409-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31970; Mature: 31970
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METMKAKELAQKILLDIYRNLDEFSKDIIRGDLADIEFKGFYLKGKNGEKAYIRNLDDFE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHCCCHHHH NLKDFDVEMRKYKLKSINLKNLDEGLMIINLSSRVSKEYKFEANEYSIIYPSNNTTIEFK CHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHCHHHEECCCCEEEEECCCCCEEHHH ERVLKWMELEDDELDEKIIEFDTKMNEILEELLEDVEVEEEISVYIDVFMDVNKIENFVE HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC KDDERIIIWIHPVFLFSNDDVLRGLLAYELSRFKSRFLEVGYKDIIKYCRELKKLTNKKP CCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCH KVLEKIKDIANKYGDIDSLNLINEIENE HHHHHHHHHHHHHCCCCHHHHHHHHCCC >Mature Secondary Structure METMKAKELAQKILLDIYRNLDEFSKDIIRGDLADIEFKGFYLKGKNGEKAYIRNLDDFE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHCCCHHHH NLKDFDVEMRKYKLKSINLKNLDEGLMIINLSSRVSKEYKFEANEYSIIYPSNNTTIEFK CHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHCHHHEECCCCEEEEECCCCCEEHHH ERVLKWMELEDDELDEKIIEFDTKMNEILEELLEDVEVEEEISVYIDVFMDVNKIENFVE HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC KDDERIIIWIHPVFLFSNDDVLRGLLAYELSRFKSRFLEVGYKDIIKYCRELKKLTNKKP CCCCEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCH KVLEKIKDIANKYGDIDSLNLINEIENE HHHHHHHHHHHHHCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087