Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15669593

Identifier: 15669593

GI number: 15669593

Start: 1364665

End: 1365789

Strand: Reverse

Name: 15669593

Synonym: MJ1403

Alternate gene names: NA

Gene position: 1365789-1364665 (Counterclockwise)

Preceding gene: 15669599

Following gene: 15669592

Centisome position: 82.03

GC content: 36.62

Gene sequence:

>1125_bases
ATGACGGTCTCCCATGGTGGGATACTTGAGGGAAGTAGTAGAGGTGGGAAGATGATGGACTGGTTAAAGAATAAAAAAGC
AATCTCTCCAATCTTAGCCTTATTAATCGTGTTAGGAGTTACAATAGTCGTAGGAGCAGTATTCTACGCATGGGGAAGTA
ATTTATTCGGAAACAGCCAAGAAAAGACACAGGCAGCAGTTGAAGGGACTGCAACAAATATGTTTTATGATGCTGGGGCA
ATTAGGGTTGCAGCAACATGTATTGACAAAATAAGATACCAAGATGCTGATGATAGTGATTCATGGTTAGGCTATCCAAA
TGGTAACGGAAAAATTGCAAAGCCATCTACTTCAAATGGATGTTATAATTCAACATACGGCACAGTATTCTATGACGAAA
GATTTATTGTGGAAATTCCAGTAACTATTGACACACAAGATTATAAATTAACTGGAGTTAAAGTTGTAGGAGGAATCCCA
AAAATAGTTGATATGGGTGGAACTTACACAAATGCCTTTGAAGATATATCTGCAAAGTTCTATGCATTCTGGTTACACCT
AAATGACAACTATCAATTGTTGAAGAAAGATGGAACATTGTTCGTTGGATACGTAAATAAATCAGGAATGTTTGAAGTTA
GTAATGGGTATGTAATTGCATGGAATCAGACAAGAGACACCTATGGAAAATTGGCTTCTTCAGTTGGTGCAACATCAGAC
TCCAGCTGGGATGCAGTTAATACAACAACTGGAGTAGCTCCACTTGTAGAGACTTCATGGCCATATTATGGAACATACTG
TAGTAATGTTAAGTTATACACAGCTACTGGAGAAGAATTAAAACCAGGATTTGGAAGTGGAACATTGGTTGCACAATGGT
TCTGCAGTTCTGCAACATACTTAGATAAACTATTCAACAACCCAGAATATGTTGTAGGAACATTACCAAAGAACTCAGAA
AAAACTGTAAAAACCTACTTATTCTTCAATACATTATACTTGCCAAACTACAAAGGATCTACAAATGATGGATATGTGAC
ATTTGAAGTTCCGTTAAAAGTTGTATCTAACGAAGGAGTAACTAAAGAAGTTAAAGTTAAATTTACGGTCTATGATGATG
AGTAG

Upstream 100 bases:

>100_bases
AGATTTATATATTATTTTGGCATGATATACTGCATAAGTAATATAATATACATAATAACCTACACAAATTAATAAAAAAT
ATATAAAATTATTACTCCCG

Downstream 100 bases:

>100_bases
ATTTTCTAATTTTTTCTTTTTTATTTATATACATCCATAAATTCAAATTTAATATAAAAATCTCTTTTCAAATTCTGAAA
AAAATAAAATTTATGAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 373

Protein sequence:

>374_residues
MTVSHGGILEGSSRGGKMMDWLKNKKAISPILALLIVLGVTIVVGAVFYAWGSNLFGNSQEKTQAAVEGTATNMFYDAGA
IRVAATCIDKIRYQDADDSDSWLGYPNGNGKIAKPSTSNGCYNSTYGTVFYDERFIVEIPVTIDTQDYKLTGVKVVGGIP
KIVDMGGTYTNAFEDISAKFYAFWLHLNDNYQLLKKDGTLFVGYVNKSGMFEVSNGYVIAWNQTRDTYGKLASSVGATSD
SSWDAVNTTTGVAPLVETSWPYYGTYCSNVKLYTATGEELKPGFGSGTLVAQWFCSSATYLDKLFNNPEYVVGTLPKNSE
KTVKTYLFFNTLYLPNYKGSTNDGYVTFEVPLKVVSNEGVTKEVKVKFTVYDDE

Sequences:

>Translated_374_residues
MTVSHGGILEGSSRGGKMMDWLKNKKAISPILALLIVLGVTIVVGAVFYAWGSNLFGNSQEKTQAAVEGTATNMFYDAGA
IRVAATCIDKIRYQDADDSDSWLGYPNGNGKIAKPSTSNGCYNSTYGTVFYDERFIVEIPVTIDTQDYKLTGVKVVGGIP
KIVDMGGTYTNAFEDISAKFYAFWLHLNDNYQLLKKDGTLFVGYVNKSGMFEVSNGYVIAWNQTRDTYGKLASSVGATSD
SSWDAVNTTTGVAPLVETSWPYYGTYCSNVKLYTATGEELKPGFGSGTLVAQWFCSSATYLDKLFNNPEYVVGTLPKNSE
KTVKTYLFFNTLYLPNYKGSTNDGYVTFEVPLKVVSNEGVTKEVKVKFTVYDDE
>Mature_373_residues
TVSHGGILEGSSRGGKMMDWLKNKKAISPILALLIVLGVTIVVGAVFYAWGSNLFGNSQEKTQAAVEGTATNMFYDAGAI
RVAATCIDKIRYQDADDSDSWLGYPNGNGKIAKPSTSNGCYNSTYGTVFYDERFIVEIPVTIDTQDYKLTGVKVVGGIPK
IVDMGGTYTNAFEDISAKFYAFWLHLNDNYQLLKKDGTLFVGYVNKSGMFEVSNGYVIAWNQTRDTYGKLASSVGATSDS
SWDAVNTTTGVAPLVETSWPYYGTYCSNVKLYTATGEELKPGFGSGTLVAQWFCSSATYLDKLFNNPEYVVGTLPKNSEK
TVKTYLFFNTLYLPNYKGSTNDGYVTFEVPLKVVSNEGVTKEVKVKFTVYDDE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1403_METJA (Q58798)

Other databases:

- EMBL:   L77117
- PIR:   B64475
- RefSeq:   NP_248406.1
- ProteinModelPortal:   Q58798
- GeneID:   1452306
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1403
- NMPDR:   fig|243232.1.peg.1443
- TIGR:   MJ1403
- OMA:   YDERFIV
- ProtClustDB:   CLSK214816
- BioCyc:   MJAN243232:MJ_1403-MONOMER
- GO:   GO:0019861
- InterPro:   IPR013373
- TIGRFAMs:   TIGR02537

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41002; Mature: 40871

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe999920)-;

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVSHGGILEGSSRGGKMMDWLKNKKAISPILALLIVLGVTIVVGAVFYAWGSNLFGNSQ
CCCCCCCEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
EKTQAAVEGTATNMFYDAGAIRVAATCIDKIRYQDADDSDSWLGYPNGNGKIAKPSTSNG
HHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEECCCCCCC
CYNSTYGTVFYDERFIVEIPVTIDTQDYKLTGVKVVGGIPKIVDMGGTYTNAFEDISAKF
CCCCCCCEEEECCEEEEEEEEEEECCCEEEEEEEEECCCCCEEECCCCHHHHHHHHCCEE
YAFWLHLNDNYQLLKKDGTLFVGYVNKSGMFEVSNGYVIAWNQTRDTYGKLASSVGATSD
EEEEEEECCCEEEEECCCCEEEEEECCCCEEEECCCEEEEECCCCHHHHHHHHHCCCCCC
SSWDAVNTTTGVAPLVETSWPYYGTYCSNVKLYTATGEELKPGFGSGTLVAQWFCSSATY
CCCCCCCCCCCCCCHHCCCCCCCCEEECCEEEEEECCCCCCCCCCCCCEEEHHHHCCHHH
LDKLFNNPEYVVGTLPKNSEKTVKTYLFFNTLYLPNYKGSTNDGYVTFEVPLKVVSNEGV
HHHHHCCCCEEEEECCCCCCCEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEECCCCC
TKEVKVKFTVYDDE
CEEEEEEEEEECCH
>Mature Secondary Structure 
TVSHGGILEGSSRGGKMMDWLKNKKAISPILALLIVLGVTIVVGAVFYAWGSNLFGNSQ
CCCCCCEEECCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
EKTQAAVEGTATNMFYDAGAIRVAATCIDKIRYQDADDSDSWLGYPNGNGKIAKPSTSNG
HHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCEEECCCCCCC
CYNSTYGTVFYDERFIVEIPVTIDTQDYKLTGVKVVGGIPKIVDMGGTYTNAFEDISAKF
CCCCCCCEEEECCEEEEEEEEEEECCCEEEEEEEEECCCCCEEECCCCHHHHHHHHCCEE
YAFWLHLNDNYQLLKKDGTLFVGYVNKSGMFEVSNGYVIAWNQTRDTYGKLASSVGATSD
EEEEEEECCCEEEEECCCCEEEEEECCCCEEEECCCEEEEECCCCHHHHHHHHHCCCCCC
SSWDAVNTTTGVAPLVETSWPYYGTYCSNVKLYTATGEELKPGFGSGTLVAQWFCSSATY
CCCCCCCCCCCCCCHHCCCCCCCCEEECCEEEEEECCCCCCCCCCCCCEEEHHHHCCHHH
LDKLFNNPEYVVGTLPKNSEKTVKTYLFFNTLYLPNYKGSTNDGYVTFEVPLKVVSNEGV
HHHHHCCCCEEEEECCCCCCCEEEEEEEEEEEEECCCCCCCCCCEEEEEEEEEEECCCCC
TKEVKVKFTVYDDE
CEEEEEEEEEECCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087