Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15669577

Identifier: 15669577

GI number: 15669577

Start: 1334289

End: 1335428

Strand: Reverse

Name: 15669577

Synonym: MJ1387

Alternate gene names: NA

Gene position: 1335428-1334289 (Counterclockwise)

Preceding gene: 15669579

Following gene: 15669575

Centisome position: 80.21

GC content: 29.04

Gene sequence:

>1140_bases
ATGTTTCTATTAGACCCATTTTCTGGAATTAGTGGAGATATGTTCTTATCAGCAATGATTGATTTTGTTGATAAAGAAGA
TTTTATAAATACAATTAAAAAAGTTATTGATGTAGAGATTGAGATAAAAAAGGTAAAGAAATGTCATATATTAGCTAACA
AAGTTAATATAATCCCAAAGTGTATTAATTGTAATGCAAACACTTATAAAGATATTAAAAACGTTATTAAAAGTTCTGAT
ATTCAAGAAGATATTAAAATTACTGCCTTAGAAATTCTAAAGATATTGGCTGAGGCAGAAAGCAAAGTGCATAATGTGGA
TGTTGAAAATGTTCATTTCCATGAAGTTGGGAATTATGATACAATTGCCGATATTGTTGGGGCAGCATATATTATAAACA
AGTTAAATCTAAAAAATAACTGCTTATATAAGCCAATAAATGTTGGAAATGGTTTTGTAAGGACAGAACATGGATTACTA
CCAGTTCCAGCTCCAGCTACGGCTGAGATATTGAAAGGACTTAAAATATTTTTTTCTGATATAAATGAAGAGCTAACAAC
ACCTACTGGATCAGCTATTATAAAGTATATAAATCCAAAATTAGCTAAAGGGGCTTTTATTATAAAAGAAGTTTCTTATG
GAGCTGGAGATAAGGATTTAAATCTTTTAAATGCCTTAAGAGTTTTTAGAGTTGAAGATATAAAGAGGGAGGATATAGTT
TTATTAGAAACGAACGTTGATGACATTTCAGCAGAGATTTTAGGCTATTTATATGAAGTTTTAGATGGAAAAGTTAGGGA
TTTGCATTTTATCCCTACATATATGAAGAAGAACAGACCAGCTTATACAATTAGGGCTATTGTTGATAGAGATATAGCTG
AGGAGGTAGCCAAAATTATAATGAGGGAGACTGGTAGTTTAGGGGTTAGAATATTTGATATAGAGAGAATAACAGCTGAT
AGAGAATTTAAAACTATAAAATTGTTTGATGAATCTGTTAGATTAAAAGTTGGGAGAGTTAATGATGAAATAATCTCTCA
AAAACCAGAGTTTGAGGATTTGAAGAACATTGCTAAAAAATATGGCATTCCTTTAAAAGATTTATATAAGTTAATAAATA
TTTCCCAAATTAAAAATTAG

Upstream 100 bases:

>100_bases
TAATCTTAATTTTTAAGTGTGTGACAGTTAGGTTAAACTTTTTATTAGTATTATCAGTATATTAATAACTTAAACTCTAA
AAAATAGAGAGGAGATTTTT

Downstream 100 bases:

>100_bases
ATTTACAAATCTTTTTTTAGATACCTTATTATAATCCAAAAACCAATACCTAATAACGCTCCAGCTATAAAGTTATCTAA
TAACATTCCAACACCTAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MFLLDPFSGISGDMFLSAMIDFVDKEDFINTIKKVIDVEIEIKKVKKCHILANKVNIIPKCINCNANTYKDIKNVIKSSD
IQEDIKITALEILKILAEAESKVHNVDVENVHFHEVGNYDTIADIVGAAYIINKLNLKNNCLYKPINVGNGFVRTEHGLL
PVPAPATAEILKGLKIFFSDINEELTTPTGSAIIKYINPKLAKGAFIIKEVSYGAGDKDLNLLNALRVFRVEDIKREDIV
LLETNVDDISAEILGYLYEVLDGKVRDLHFIPTYMKKNRPAYTIRAIVDRDIAEEVAKIIMRETGSLGVRIFDIERITAD
REFKTIKLFDESVRLKVGRVNDEIISQKPEFEDLKNIAKKYGIPLKDLYKLINISQIKN

Sequences:

>Translated_379_residues
MFLLDPFSGISGDMFLSAMIDFVDKEDFINTIKKVIDVEIEIKKVKKCHILANKVNIIPKCINCNANTYKDIKNVIKSSD
IQEDIKITALEILKILAEAESKVHNVDVENVHFHEVGNYDTIADIVGAAYIINKLNLKNNCLYKPINVGNGFVRTEHGLL
PVPAPATAEILKGLKIFFSDINEELTTPTGSAIIKYINPKLAKGAFIIKEVSYGAGDKDLNLLNALRVFRVEDIKREDIV
LLETNVDDISAEILGYLYEVLDGKVRDLHFIPTYMKKNRPAYTIRAIVDRDIAEEVAKIIMRETGSLGVRIFDIERITAD
REFKTIKLFDESVRLKVGRVNDEIISQKPEFEDLKNIAKKYGIPLKDLYKLINISQIKN
>Mature_379_residues
MFLLDPFSGISGDMFLSAMIDFVDKEDFINTIKKVIDVEIEIKKVKKCHILANKVNIIPKCINCNANTYKDIKNVIKSSD
IQEDIKITALEILKILAEAESKVHNVDVENVHFHEVGNYDTIADIVGAAYIINKLNLKNNCLYKPINVGNGFVRTEHGLL
PVPAPATAEILKGLKIFFSDINEELTTPTGSAIIKYINPKLAKGAFIIKEVSYGAGDKDLNLLNALRVFRVEDIKREDIV
LLETNVDDISAEILGYLYEVLDGKVRDLHFIPTYMKKNRPAYTIRAIVDRDIAEEVAKIIMRETGSLGVRIFDIERITAD
REFKTIKLFDESVRLKVGRVNDEIISQKPEFEDLKNIAKKYGIPLKDLYKLINISQIKN

Specific function: Unknown

COG id: COG1641

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0272 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1387_METJA (Q58782)

Other databases:

- EMBL:   L77117
- PIR:   B64473
- RefSeq:   NP_248390.1
- ProteinModelPortal:   Q58782
- SMR:   Q58782
- GeneID:   1452290
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1387
- NMPDR:   fig|243232.1.peg.1427
- TIGR:   MJ1387
- HOGENOM:   HBG733311
- OMA:   IVGTCLG
- ProtClustDB:   PRK04194
- BioCyc:   MJAN243232:MJ_1387-MONOMER
- HAMAP:   MF_01074
- InterPro:   IPR002822
- TIGRFAMs:   TIGR00299

Pfam domain/function: PF01969 DUF111

EC number: NA

Molecular weight: Translated: 42869; Mature: 42869

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLLDPFSGISGDMFLSAMIDFVDKEDFINTIKKVIDVEIEIKKVKKCHILANKVNIIPK
CEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHCCC
CINCNANTYKDIKNVIKSSDIQEDIKITALEILKILAEAESKVHNVDVENVHFHEVGNYD
EECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCH
TIADIVGAAYIINKLNLKNNCLYKPINVGNGFVRTEHGLLPVPAPATAEILKGLKIFFSD
HHHHHHHHHHHHHHCCCCCCCEECEEECCCCEEEECCCEECCCCCCHHHHHHHHHHHHHH
INEELTTPTGSAIIKYINPKLAKGAFIIKEVSYGAGDKDLNLLNALRVFRVEDIKREDIV
HHHHHCCCCHHHHHHHCCCHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEE
LLETNVDDISAEILGYLYEVLDGKVRDLHFIPTYMKKNRPAYTIRAIVDRDIAEEVAKII
EEECCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCCCCEEHHHHHHHHHHHHHHHHH
MRETGSLGVRIFDIERITADREFKTIKLFDESVRLKVGRVNDEIISQKPEFEDLKNIAKK
HHCCCCCCEEEEEEEECCCCCCEEEEEEECCCCEEEEECCCHHHHCCCCCHHHHHHHHHH
YGIPLKDLYKLINISQIKN
HCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFLLDPFSGISGDMFLSAMIDFVDKEDFINTIKKVIDVEIEIKKVKKCHILANKVNIIPK
CEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHCCC
CINCNANTYKDIKNVIKSSDIQEDIKITALEILKILAEAESKVHNVDVENVHFHEVGNYD
EECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCH
TIADIVGAAYIINKLNLKNNCLYKPINVGNGFVRTEHGLLPVPAPATAEILKGLKIFFSD
HHHHHHHHHHHHHHCCCCCCCEECEEECCCCEEEECCCEECCCCCCHHHHHHHHHHHHHH
INEELTTPTGSAIIKYINPKLAKGAFIIKEVSYGAGDKDLNLLNALRVFRVEDIKREDIV
HHHHHCCCCHHHHHHHCCCHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEE
LLETNVDDISAEILGYLYEVLDGKVRDLHFIPTYMKKNRPAYTIRAIVDRDIAEEVAKII
EEECCCHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCCCCEEHHHHHHHHHHHHHHHHH
MRETGSLGVRIFDIERITADREFKTIKLFDESVRLKVGRVNDEIISQKPEFEDLKNIAKK
HHCCCCCCEEEEEEEECCCCCCEEEEEEECCCCEEEEECCCHHHHCCCCCHHHHHHHHHH
YGIPLKDLYKLINISQIKN
HCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087