| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669572
Identifier: 15669572
GI number: 15669572
Start: 1331028
End: 1331468
Strand: Reverse
Name: 15669572
Synonym: MJ1382
Alternate gene names: NA
Gene position: 1331468-1331028 (Counterclockwise)
Preceding gene: 15669573
Following gene: 15669567
Centisome position: 79.97
GC content: 31.07
Gene sequence:
>441_bases ATGGCATACTGGCTTTGTATAACAAATGAAGATAATTGGAAGGTAATAAAAGACAAGAAGATTTGGGGAGTGGCTGAAAG GCATAAAAACACTATAAATAAAGTTAAAGTTGGAGATAAACTAATTATTTATGAGATTCAGAGAAGTGGGAAAGATTATA AACCACCATACATAAGAGGAGTTTATGAAGTTGTTTCAGAGGTTTATAAAGATAGTTCAAAAATCTTTAAGCCAACTCCA AGAAACCCTAATGAGAAATTCCCATATAGGGTTAAATTAAAAGAAGTTAAAGTTTTTGTGCCACCAATTAACTTTAAGGA TTTAATTCCAAAGTTGAAATTCATAACAAACAAAAAGAAGTGGAGTGGGCATTTGATGGGAAAAGCAATGAGAGAAATTC CAGAAGAGGATTATAAGTTGATTATTGAAGCTAAAGCTTAA
Upstream 100 bases:
>100_bases TAAAAATCAATAAAAAATTTTATTAATAAAAATAATAGTTAGGACTCTCCGTATATTTAATTTTACTCACAAAAAATAAA CAGTTTTAAACGGCGATATT
Downstream 100 bases:
>100_bases AACCTATTTTTTATCCTTGCATCAAGCTCATCTAATGAATAAACACTTAACTCTCCAGTTTTTACAGCTTCTATTGCCTT AACAGCAGCTTTTGCTCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MAYWLCITNEDNWKVIKDKKIWGVAERHKNTINKVKVGDKLIIYEIQRSGKDYKPPYIRGVYEVVSEVYKDSSKIFKPTP RNPNEKFPYRVKLKEVKVFVPPINFKDLIPKLKFITNKKKWSGHLMGKAMREIPEEDYKLIIEAKA
Sequences:
>Translated_146_residues MAYWLCITNEDNWKVIKDKKIWGVAERHKNTINKVKVGDKLIIYEIQRSGKDYKPPYIRGVYEVVSEVYKDSSKIFKPTP RNPNEKFPYRVKLKEVKVFVPPINFKDLIPKLKFITNKKKWSGHLMGKAMREIPEEDYKLIIEAKA >Mature_145_residues AYWLCITNEDNWKVIKDKKIWGVAERHKNTINKVKVGDKLIIYEIQRSGKDYKPPYIRGVYEVVSEVYKDSSKIFKPTPR NPNEKFPYRVKLKEVKVFVPPINFKDLIPKLKFITNKKKWSGHLMGKAMREIPEEDYKLIIEAKA
Specific function: Unknown
COG id: COG1673
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0310 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1382_METJA (Q58777)
Other databases:
- EMBL: L77117 - PIR: E64472 - RefSeq: NP_248385.1 - ProteinModelPortal: Q58777 - SMR: Q58777 - GeneID: 1452285 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1382 - NMPDR: fig|243232.1.peg.1422 - TIGR: MJ1382 - HOGENOM: HBG553255 - OMA: CITTEEN - ProtClustDB: PRK00809 - BioCyc: MJAN243232:MJ_1382-MONOMER - HAMAP: MF_00771 - InterPro: IPR002740 - InterPro: IPR015947 - InterPro: IPR022996
Pfam domain/function: PF01878 DUF55; SSF88697 PUA-like
EC number: NA
Molecular weight: Translated: 17300; Mature: 17168
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYWLCITNEDNWKVIKDKKIWGVAERHKNTINKVKVGDKLIIYEIQRSGKDYKPPYIRG CEEEEEEECCCCEEEEECCCEECHHHHHHHHHHEEECCCEEEEEEEECCCCCCCCHHHHH VYEVVSEVYKDSSKIFKPTPRNPNEKFPYRVKLKEVKVFVPPINFKDLIPKLKFITNKKK HHHHHHHHHHCCCCEECCCCCCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHCCCCC WSGHLMGKAMREIPEEDYKLIIEAKA CCHHHHHHHHHHCCCCCEEEEEEECC >Mature Secondary Structure AYWLCITNEDNWKVIKDKKIWGVAERHKNTINKVKVGDKLIIYEIQRSGKDYKPPYIRG EEEEEEECCCCEEEEECCCEECHHHHHHHHHHEEECCCEEEEEEEECCCCCCCCHHHHH VYEVVSEVYKDSSKIFKPTPRNPNEKFPYRVKLKEVKVFVPPINFKDLIPKLKFITNKKK HHHHHHHHHHCCCCEECCCCCCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHCCCCC WSGHLMGKAMREIPEEDYKLIIEAKA CCHHHHHHHHHHCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087