Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15669572

Identifier: 15669572

GI number: 15669572

Start: 1331028

End: 1331468

Strand: Reverse

Name: 15669572

Synonym: MJ1382

Alternate gene names: NA

Gene position: 1331468-1331028 (Counterclockwise)

Preceding gene: 15669573

Following gene: 15669567

Centisome position: 79.97

GC content: 31.07

Gene sequence:

>441_bases
ATGGCATACTGGCTTTGTATAACAAATGAAGATAATTGGAAGGTAATAAAAGACAAGAAGATTTGGGGAGTGGCTGAAAG
GCATAAAAACACTATAAATAAAGTTAAAGTTGGAGATAAACTAATTATTTATGAGATTCAGAGAAGTGGGAAAGATTATA
AACCACCATACATAAGAGGAGTTTATGAAGTTGTTTCAGAGGTTTATAAAGATAGTTCAAAAATCTTTAAGCCAACTCCA
AGAAACCCTAATGAGAAATTCCCATATAGGGTTAAATTAAAAGAAGTTAAAGTTTTTGTGCCACCAATTAACTTTAAGGA
TTTAATTCCAAAGTTGAAATTCATAACAAACAAAAAGAAGTGGAGTGGGCATTTGATGGGAAAAGCAATGAGAGAAATTC
CAGAAGAGGATTATAAGTTGATTATTGAAGCTAAAGCTTAA

Upstream 100 bases:

>100_bases
TAAAAATCAATAAAAAATTTTATTAATAAAAATAATAGTTAGGACTCTCCGTATATTTAATTTTACTCACAAAAAATAAA
CAGTTTTAAACGGCGATATT

Downstream 100 bases:

>100_bases
AACCTATTTTTTATCCTTGCATCAAGCTCATCTAATGAATAAACACTTAACTCTCCAGTTTTTACAGCTTCTATTGCCTT
AACAGCAGCTTTTGCTCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MAYWLCITNEDNWKVIKDKKIWGVAERHKNTINKVKVGDKLIIYEIQRSGKDYKPPYIRGVYEVVSEVYKDSSKIFKPTP
RNPNEKFPYRVKLKEVKVFVPPINFKDLIPKLKFITNKKKWSGHLMGKAMREIPEEDYKLIIEAKA

Sequences:

>Translated_146_residues
MAYWLCITNEDNWKVIKDKKIWGVAERHKNTINKVKVGDKLIIYEIQRSGKDYKPPYIRGVYEVVSEVYKDSSKIFKPTP
RNPNEKFPYRVKLKEVKVFVPPINFKDLIPKLKFITNKKKWSGHLMGKAMREIPEEDYKLIIEAKA
>Mature_145_residues
AYWLCITNEDNWKVIKDKKIWGVAERHKNTINKVKVGDKLIIYEIQRSGKDYKPPYIRGVYEVVSEVYKDSSKIFKPTPR
NPNEKFPYRVKLKEVKVFVPPINFKDLIPKLKFITNKKKWSGHLMGKAMREIPEEDYKLIIEAKA

Specific function: Unknown

COG id: COG1673

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0310 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1382_METJA (Q58777)

Other databases:

- EMBL:   L77117
- PIR:   E64472
- RefSeq:   NP_248385.1
- ProteinModelPortal:   Q58777
- SMR:   Q58777
- GeneID:   1452285
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1382
- NMPDR:   fig|243232.1.peg.1422
- TIGR:   MJ1382
- HOGENOM:   HBG553255
- OMA:   CITTEEN
- ProtClustDB:   PRK00809
- BioCyc:   MJAN243232:MJ_1382-MONOMER
- HAMAP:   MF_00771
- InterPro:   IPR002740
- InterPro:   IPR015947
- InterPro:   IPR022996

Pfam domain/function: PF01878 DUF55; SSF88697 PUA-like

EC number: NA

Molecular weight: Translated: 17300; Mature: 17168

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYWLCITNEDNWKVIKDKKIWGVAERHKNTINKVKVGDKLIIYEIQRSGKDYKPPYIRG
CEEEEEEECCCCEEEEECCCEECHHHHHHHHHHEEECCCEEEEEEEECCCCCCCCHHHHH
VYEVVSEVYKDSSKIFKPTPRNPNEKFPYRVKLKEVKVFVPPINFKDLIPKLKFITNKKK
HHHHHHHHHHCCCCEECCCCCCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHCCCCC
WSGHLMGKAMREIPEEDYKLIIEAKA
CCHHHHHHHHHHCCCCCEEEEEEECC
>Mature Secondary Structure 
AYWLCITNEDNWKVIKDKKIWGVAERHKNTINKVKVGDKLIIYEIQRSGKDYKPPYIRG
EEEEEEECCCCEEEEECCCEECHHHHHHHHHHEEECCCEEEEEEEECCCCCCCCHHHHH
VYEVVSEVYKDSSKIFKPTPRNPNEKFPYRVKLKEVKVFVPPINFKDLIPKLKFITNKKK
HHHHHHHHHHCCCCEECCCCCCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHCCCCC
WSGHLMGKAMREIPEEDYKLIIEAKA
CCHHHHHHHHHHCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087