| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is gltX
Identifier: 15669567
GI number: 15669567
Start: 1325028
End: 1326689
Strand: Reverse
Name: gltX
Synonym: MJ1377
Alternate gene names: 15669567
Gene position: 1326689-1325028 (Counterclockwise)
Preceding gene: 15669572
Following gene: 15669565
Centisome position: 79.68
GC content: 33.39
Gene sequence:
>1662_bases GTGGAAGAGAAGATATTGCCAATTGCATTAAGAAATGCCATAAAATACAATGGAAAAGCTAATCCAAAGGCAGTTTTAGG GATATTTTTGTCAGAAAATCCAGAATATAGGAGTAAAGCAAAGGAGGTAATGCCAATTGTTGAGAAAGTTGTTGAAGAAG TTAATAAACTATCATTGGATGAAATTAAGAAAAAGTTGGAAGAATTAGGAGAAGATGTTAAAAAGAAAGAAAAAAAGGAG AAAGGTTTAGAATTACCAAACGTTAAAGATAAGGTAGTTATGAGATTCGCTCCTAATCCATCAGGGCCTTTACATATAGG GCATGCAAGAGCAGCAGTTTTAAATGACTACTTTGTTAAAAAATATGGTGGAAAGTTAATTTTAAGATTAGAGGATACAG ACCCAAAGAGAGTTCTGCCAGAAGCTTATGACATGATTAAAGAAGATTTGGATTGGCTGGGGGTTAAAGTTGATGAAGTG GTTATACAATCAGATAGAATAGAGCTTTATTATGAATATGGTAGAAAATTGATTGAAATGGGACATGCTTATGTTTGTGA CTGCAATCCAGAAGAATTTAGGGAATTGAGAAATAAAGGAGTTCCATGTAAGTGTAGAGATAGAGCCATTGAGGATAACT TAGAGCTTTGGGAAAAGATGCTGAATGGAGAACTTGAAAATGTAGCTGTTAGATTAAAAACAGACATAAAACACAAAAAC CCATCAATTAGGGACTTTCCAATATTCAGAGTTGAAAAAACTCCACATCCAAGAACTGGAGATAAATACTGTGTATATCC TTTAATGAACTTCTCTGTTCCAGTTGATGATCATCTTTTAGGAATGACTCATGTTTTGAGAGGAAAAGACCACATTGTAA ATACTGAGAAGCAAGCTTATATTTACAAATACTTTGGTTGGGAAATGCCAGAATTCATCCACTATGGGATTTTGAAGATA GAGGACATTGTTTTAAGCACTTCATCAATGTATAAAGGAATTAAAGAAGGTCTCTATAGTGGATGGGATGACGTTAGATT AGGAACTTTAAGAGCTTTAAGAAGAAGAGGGATTAAACCAGAGGCAATATATGAGATAATGAAAAGAATTGGAATTAAAC AGGCAGATGTTAAGTTTTCTTGGGAGAATTTATATGCAATAAATAAGGAGCTTATTGATAAAGATGCAAGGAGATTCTTC TTTGTCTGGAATCCAAAGAAACTTATTATCGAAGGGGCAGAGAAAAAGGTCTTAAAACTTAGAATGCATCCAGATAGACC AGAATTTGGAGAGAGGGAGTTAATATTTGATGGAGAGGTTTATGTTGTTGGAGATGAGTTGGAAGAGAATAAGATGTATA GATTGATGGAGTTATTTAACATAGTTGTTGAAAAAGTTGATGATATAGCATTAGCTAAATATCACTCAGATGACTTTAAA ATAGCAAGGAAGAACAAAGCTAAGATTATACACTGGATTCCTGTAAAGGATAGTGTAAAGGTTAAAGTTTTAATGCCTGA TGGAGAGATAAAGGAAGGCTTTGCTGAAAAAGATTTTGCTAAAGTAGAGGTTGATGATATTATCCAATTTGAGAGGTTTG GATTTGTTAGAATAGATAAAAAAGATAATGATGGATTCGTATGTTGCTATGCACATAGATAA
Upstream 100 bases:
>100_bases TAAAATTGCATAACTATATTTATGTTACTTAACTTTAAGTATCCTTTTCCTAATAATCAGTTAAGGTTTTTAAAGTTAAT GGTAGGTAAATGGTGATAAT
Downstream 100 bases:
>100_bases AAATAATTTTTTTATTTTTTAGATTTTAATTTCCTAATCTCTTTAATTTTTTTAGCTAAAAGTTCATTATCTTCATTTTC AACTTTTTTAACCCTTTTTA
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS
Number of amino acids: Translated: 553; Mature: 553
Protein sequence:
>553_residues MEEKILPIALRNAIKYNGKANPKAVLGIFLSENPEYRSKAKEVMPIVEKVVEEVNKLSLDEIKKKLEELGEDVKKKEKKE KGLELPNVKDKVVMRFAPNPSGPLHIGHARAAVLNDYFVKKYGGKLILRLEDTDPKRVLPEAYDMIKEDLDWLGVKVDEV VIQSDRIELYYEYGRKLIEMGHAYVCDCNPEEFRELRNKGVPCKCRDRAIEDNLELWEKMLNGELENVAVRLKTDIKHKN PSIRDFPIFRVEKTPHPRTGDKYCVYPLMNFSVPVDDHLLGMTHVLRGKDHIVNTEKQAYIYKYFGWEMPEFIHYGILKI EDIVLSTSSMYKGIKEGLYSGWDDVRLGTLRALRRRGIKPEAIYEIMKRIGIKQADVKFSWENLYAINKELIDKDARRFF FVWNPKKLIIEGAEKKVLKLRMHPDRPEFGERELIFDGEVYVVGDELEENKMYRLMELFNIVVEKVDDIALAKYHSDDFK IARKNKAKIIHWIPVKDSVKVKVLMPDGEIKEGFAEKDFAKVEVDDIIQFERFGFVRIDKKDNDGFVCCYAHR
Sequences:
>Translated_553_residues MEEKILPIALRNAIKYNGKANPKAVLGIFLSENPEYRSKAKEVMPIVEKVVEEVNKLSLDEIKKKLEELGEDVKKKEKKE KGLELPNVKDKVVMRFAPNPSGPLHIGHARAAVLNDYFVKKYGGKLILRLEDTDPKRVLPEAYDMIKEDLDWLGVKVDEV VIQSDRIELYYEYGRKLIEMGHAYVCDCNPEEFRELRNKGVPCKCRDRAIEDNLELWEKMLNGELENVAVRLKTDIKHKN PSIRDFPIFRVEKTPHPRTGDKYCVYPLMNFSVPVDDHLLGMTHVLRGKDHIVNTEKQAYIYKYFGWEMPEFIHYGILKI EDIVLSTSSMYKGIKEGLYSGWDDVRLGTLRALRRRGIKPEAIYEIMKRIGIKQADVKFSWENLYAINKELIDKDARRFF FVWNPKKLIIEGAEKKVLKLRMHPDRPEFGERELIFDGEVYVVGDELEENKMYRLMELFNIVVEKVDDIALAKYHSDDFK IARKNKAKIIHWIPVKDSVKVKVLMPDGEIKEGFAEKDFAKVEVDDIIQFERFGFVRIDKKDNDGFVCCYAHR >Mature_553_residues MEEKILPIALRNAIKYNGKANPKAVLGIFLSENPEYRSKAKEVMPIVEKVVEEVNKLSLDEIKKKLEELGEDVKKKEKKE KGLELPNVKDKVVMRFAPNPSGPLHIGHARAAVLNDYFVKKYGGKLILRLEDTDPKRVLPEAYDMIKEDLDWLGVKVDEV VIQSDRIELYYEYGRKLIEMGHAYVCDCNPEEFRELRNKGVPCKCRDRAIEDNLELWEKMLNGELENVAVRLKTDIKHKN PSIRDFPIFRVEKTPHPRTGDKYCVYPLMNFSVPVDDHLLGMTHVLRGKDHIVNTEKQAYIYKYFGWEMPEFIHYGILKI EDIVLSTSSMYKGIKEGLYSGWDDVRLGTLRALRRRGIKPEAIYEIMKRIGIKQADVKFSWENLYAINKELIDKDARRFF FVWNPKKLIIEGAEKKVLKLRMHPDRPEFGERELIFDGEVYVVGDELEENKMYRLMELFNIVVEKVDDIALAKYHSDDFK IARKNKAKIIHWIPVKDSVKVKVLMPDGEIKEGFAEKDFAKVEVDDIIQFERFGFVRIDKKDNDGFVCCYAHR
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI62241042, Length=506, Percent_Identity=31.4229249011858, Blast_Score=239, Evalue=3e-63, Organism=Homo sapiens, GI4826960, Length=320, Percent_Identity=31.875, Blast_Score=163, Evalue=3e-40, Organism=Homo sapiens, GI134288884, Length=251, Percent_Identity=34.2629482071713, Blast_Score=139, Evalue=7e-33, Organism=Escherichia coli, GI1786895, Length=504, Percent_Identity=30.5555555555556, Blast_Score=211, Evalue=9e-56, Organism=Escherichia coli, GI1788743, Length=301, Percent_Identity=28.5714285714286, Blast_Score=119, Evalue=4e-28, Organism=Escherichia coli, GI226510925, Length=297, Percent_Identity=29.2929292929293, Blast_Score=100, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17511007, Length=359, Percent_Identity=33.7047353760446, Blast_Score=213, Evalue=2e-55, Organism=Caenorhabditis elegans, GI17543332, Length=502, Percent_Identity=28.0876494023904, Blast_Score=178, Evalue=6e-45, Organism=Caenorhabditis elegans, GI71993394, Length=326, Percent_Identity=30.6748466257669, Blast_Score=130, Evalue=1e-30, Organism=Saccharomyces cerevisiae, GI6321192, Length=527, Percent_Identity=33.3965844402277, Blast_Score=246, Evalue=9e-66, Organism=Saccharomyces cerevisiae, GI6324742, Length=419, Percent_Identity=31.0262529832936, Blast_Score=210, Evalue=5e-55, Organism=Saccharomyces cerevisiae, GI6324540, Length=296, Percent_Identity=32.0945945945946, Blast_Score=130, Evalue=5e-31, Organism=Drosophila melanogaster, GI24649466, Length=537, Percent_Identity=29.7951582867784, Blast_Score=234, Evalue=9e-62, Organism=Drosophila melanogaster, GI17864488, Length=500, Percent_Identity=29, Blast_Score=181, Evalue=2e-45, Organism=Drosophila melanogaster, GI24665321, Length=256, Percent_Identity=34.375, Blast_Score=135, Evalue=8e-32,
Paralogues:
None
Copy number: 520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 1200 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYE_METJA (Q58772)
Other databases:
- EMBL: L77117 - PIR: H64471 - RefSeq: NP_248380.1 - ProteinModelPortal: Q58772 - SMR: Q58772 - GeneID: 1452280 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1377 - NMPDR: fig|243232.1.peg.1417 - TIGR: MJ1377 - HOGENOM: HBG334108 - OMA: MRFAPNP - ProtClustDB: PRK04156 - BioCyc: MJAN243232:MJ_1377-MONOMER - BRENDA: 6.1.1.17 - GO: GO:0005737 - HAMAP: MF_00022_A - InterPro: IPR001412 - InterPro: IPR004526 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR020059 - InterPro: IPR022888 - InterPro: IPR020056 - InterPro: IPR011035 - InterPro: IPR014729 - Gene3D: G3DSA:1.10.1160.10 - Gene3D: G3DSA:2.40.240.10 - Gene3D: G3DSA:3.40.50.620 - PANTHER: PTHR10119 - PRINTS: PR00987 - TIGRFAMs: TIGR00463
Pfam domain/function: PF00749 tRNA-synt_1c; PF03950 tRNA-synt_1c_C; SSF50715 Ribosomal_L25rel
EC number: =6.1.1.17
Molecular weight: Translated: 64578; Mature: 64578
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEEKILPIALRNAIKYNGKANPKAVLGIFLSENPEYRSKAKEVMPIVEKVVEEVNKLSLD CCCCEEHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHH EIKKKLEELGEDVKKKEKKEKGLELPNVKDKVVMRFAPNPSGPLHIGHARAAVLNDYFVK HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEECCHHHHHHHHHHHH KYGGKLILRLEDTDPKRVLPEAYDMIKEDLDWLGVKVDEVVIQSDRIELYYEYGRKLIEM HCCCEEEEEEECCCCHHCCHHHHHHHHHHHHHHCCCHHHEEEECCCEEHHHHHHHHHHHC GHAYVCDCNPEEFRELRNKGVPCKCRDRAIEDNLELWEKMLNGELENVAVRLKTDIKHKN CCEEEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHEEEEEEECCCCCC PSIRDFPIFRVEKTPHPRTGDKYCVYPLMNFSVPVDDHLLGMTHVLRGKDHIVNTEKQAY CCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCEE IYKYFGWEMPEFIHYGILKIEDIVLSTSSMYKGIKEGLYSGWDDVRLGTLRALRRRGIKP EEEECCCCCHHHHHHHHHEEEHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCH EAIYEIMKRIGIKQADVKFSWENLYAINKELIDKDARRFFFVWNPKKLIIEGAEKKVLKL HHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHCCCCCEEEEEECCCEEEEECCCCEEEEE RMHPDRPEFGERELIFDGEVYVVGDELEENKMYRLMELFNIVVEKVDDIALAKYHSDDFK EECCCCCCCCCEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCE IARKNKAKIIHWIPVKDSVKVKVLMPDGEIKEGFAEKDFAKVEVDDIIQFERFGFVRIDK EEECCCCEEEEEEECCCCEEEEEECCCCCHHCCCCCCCCCEEEHHHHHHHHHCCEEEEEC KDNDGFVCCYAHR CCCCCEEEEEECC >Mature Secondary Structure MEEKILPIALRNAIKYNGKANPKAVLGIFLSENPEYRSKAKEVMPIVEKVVEEVNKLSLD CCCCEEHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHH EIKKKLEELGEDVKKKEKKEKGLELPNVKDKVVMRFAPNPSGPLHIGHARAAVLNDYFVK HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEECCHHHHHHHHHHHH KYGGKLILRLEDTDPKRVLPEAYDMIKEDLDWLGVKVDEVVIQSDRIELYYEYGRKLIEM HCCCEEEEEEECCCCHHCCHHHHHHHHHHHHHHCCCHHHEEEECCCEEHHHHHHHHHHHC GHAYVCDCNPEEFRELRNKGVPCKCRDRAIEDNLELWEKMLNGELENVAVRLKTDIKHKN CCEEEECCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHEEEEEEECCCCCC PSIRDFPIFRVEKTPHPRTGDKYCVYPLMNFSVPVDDHLLGMTHVLRGKDHIVNTEKQAY CCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCEE IYKYFGWEMPEFIHYGILKIEDIVLSTSSMYKGIKEGLYSGWDDVRLGTLRALRRRGIKP EEEECCCCCHHHHHHHHHEEEHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCH EAIYEIMKRIGIKQADVKFSWENLYAINKELIDKDARRFFFVWNPKKLIIEGAEKKVLKL HHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHCCCCCEEEEEECCCEEEEECCCCEEEEE RMHPDRPEFGERELIFDGEVYVVGDELEENKMYRLMELFNIVVEKVDDIALAKYHSDDFK EECCCCCCCCCEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCE IARKNKAKIIHWIPVKDSVKVKVLMPDGEIKEGFAEKDFAKVEVDDIIQFERFGFVRIDK EEECCCCEEEEEEECCCCEEEEEECCCCCHHCCCCCCCCCEEEHHHHHHHHHCCEEEEEC KDNDGFVCCYAHR CCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087