Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

Click here to switch to the map view.

The map label for this gene is 15669544

Identifier: 15669544

GI number: 15669544

Start: 1304333

End: 1304770

Strand: Direct

Name: 15669544

Synonym: MJ1354

Alternate gene names: NA

Gene position: 1304333-1304770 (Clockwise)

Preceding gene: 15669539

Following gene: 15669545

Centisome position: 78.34

GC content: 29.0

Gene sequence:

>438_bases
ATGGATGTAGGAATAATACTTGGAATTCTCTCAGCCATGGGTTTTTTAGTATTTTTAGGGATTGGAGGCCATATTCTTAT
AGGATATGAAATAATAAGAAAGATTAGCAAAGCCTATGAAAAAGGGGAAGATGTGAAAGAACTTGAAAATAAAATAATAA
ATAAAAGTCATTTAACAAATACCTTAGAGAAAATAACAACATTCACACTAACTTCTATATTTCTCTTTGAGATGGAAAAA
TACAGGTATGTAATTGATGTTGGATATTCAATTTTGTTCTTAGTAACTTTAACGTTATATTTGGTGCCAAATCTTAGCCT
GCTTGTATGGGTTACATTCTTTGGAGCAACAGTTTTTATGATAATGTTGTGGATTCTTAGATTTAGAGCAATAAAAGAAT
TCAATAAAGCATTTATTGAAGAACTTACAACACAATAA

Upstream 100 bases:

>100_bases
TTTTTATAGAACTTCATAGACATAAAAAAGTGAGAACTTTAATTAGTAAAAAATGAATATAAATTAGCAATATTAGAACA
AAATATGATAGGGGAAAATA

Downstream 100 bases:

>100_bases
AAATAAATACAAAAATAATAATAAATAGTGATGAGGTGATATCGTGTTCCTAAAAAAGAGACACTTGGAAATATTAAAAA
AGATGAAAGAGACAGAAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MDVGIILGILSAMGFLVFLGIGGHILIGYEIIRKISKAYEKGEDVKELENKIINKSHLTNTLEKITTFTLTSIFLFEMEK
YRYVIDVGYSILFLVTLTLYLVPNLSLLVWVTFFGATVFMIMLWILRFRAIKEFNKAFIEELTTQ

Sequences:

>Translated_145_residues
MDVGIILGILSAMGFLVFLGIGGHILIGYEIIRKISKAYEKGEDVKELENKIINKSHLTNTLEKITTFTLTSIFLFEMEK
YRYVIDVGYSILFLVTLTLYLVPNLSLLVWVTFFGATVFMIMLWILRFRAIKEFNKAFIEELTTQ
>Mature_145_residues
MDVGIILGILSAMGFLVFLGIGGHILIGYEIIRKISKAYEKGEDVKELENKIINKSHLTNTLEKITTFTLTSIFLFEMEK
YRYVIDVGYSILFLVTLTLYLVPNLSLLVWVTFFGATVFMIMLWILRFRAIKEFNKAFIEELTTQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1354_METJA (Q58749)

Other databases:

- EMBL:   L77117
- PIR:   A64469
- RefSeq:   NP_248357.1
- GeneID:   1452256
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1354
- NMPDR:   fig|243232.1.peg.1394
- TIGR:   MJ1354
- OMA:   GATVFMI
- ProtClustDB:   CLSK2517725
- BioCyc:   MJAN243232:MJ_1354-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16713; Mature: 16713

Theoretical pI: Translated: 7.66; Mature: 7.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe8993e4)-; HASH(0xe854a20)-; HASH(0xd899dd4)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVGIILGILSAMGFLVFLGIGGHILIGYEIIRKISKAYEKGEDVKELENKIINKSHLTN
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
TLEKITTFTLTSIFLFEMEKYRYVIDVGYSILFLVTLTLYLVPNLSLLVWVTFFGATVFM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
IMLWILRFRAIKEFNKAFIEELTTQ
HHHHHHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MDVGIILGILSAMGFLVFLGIGGHILIGYEIIRKISKAYEKGEDVKELENKIINKSHLTN
CCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
TLEKITTFTLTSIFLFEMEKYRYVIDVGYSILFLVTLTLYLVPNLSLLVWVTFFGATVFM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
IMLWILRFRAIKEFNKAFIEELTTQ
HHHHHHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087