| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669539
Identifier: 15669539
GI number: 15669539
Start: 1295114
End: 1296124
Strand: Direct
Name: 15669539
Synonym: MJ1348
Alternate gene names: NA
Gene position: 1295114-1296124 (Clockwise)
Preceding gene: 15669538
Following gene: 15669544
Centisome position: 77.79
GC content: 25.22
Gene sequence:
>1011_bases TTGAGATGTTTAGAGCTTAATTGGGAGATTATGAACAAAGATTCGTCAAATTTTCTATACAAATATTGGCTTAAAGGATG TGAGTTTTATAATAAAAAGGACTACGATAAAGCAATAGAGTATTTTAGTTTATCTAATAAAATCTTTAAAGAAAATGTCC CAAAATGTGATTATTATGGACTTAGAGAAGAGGCTTATAAAGAAATTTTAAATAACAACATTGAAGAAGGAATTAAAAAA TTCGACTGGTTTGTTGAAGGGATTTTGGCAGATGGAGATTATTATAATTTAAGTGGAGAGTTATCAACTATTGCCTCAAT ATTTGCAAAGATTGGGAAATTAGATATTACAAAAAACTTTTTAAATAGTGGGGGAGAGTGGATTTATAACGATGTTATTA AAGATGCTAATTCAGAGGATATTTTAAAAAGTGTTTTAACTTTTGACTTTAGCTATGAAGAAAGAAAAGAAATCTTAAAC AGAGAGCCTCATTTAAGAAAACTATTTGAAGATAATATATATAATTTCAATTCAGATTTCTTTGATTTTATGATGATGTT TTTTATAGGGGCTGGAAATTGGAAAAGATTTTTAGAAGTTTATGAGGAATTTAAAAATAAAATTAAAAGTTGCCAAATAT CTAATGAGATTGTCAATGAAATCATTAAAAGATTTGACAAATCAATGAGTGATTTATTGGCTATTGCCCATCTACTAAAA GAAAATTATGAAAAATGCCTTTATTATGTTATGCTATTTAAGGAATATTTTGATTTAGATGAATTTAATGAAATTGAGAA AAATAAGATTAATCTAATTGTGGATATTGCATATAATTTAAAAAATGGCAATGTAAAAAAAGAAGAATGGCTAAATAGGT TAAATGAAATCTATAAAGAGATTATAAAACGACCATTACCAAATACCTATAAAGATGCCCATAATGATGATTTATTAAAT GAAATCTTGGATTATTATGTTTTGAAAGAGTTTATTGAAAAAAAGTTATAG
Upstream 100 bases:
>100_bases TGTATGAGAAGGAAGAGAGCTTTTTTAATGGCTGGAGTTGAAGATAAGACAAAGTATATTGAATAGGAAGATTGATTCTT TAATATGTTGATTTTTTATT
Downstream 100 bases:
>100_bases TTGAATTTAATCCTTTTTAACTCTCTTTTTCTTTAATTCAACAAGTTTTTCAACTGCTTCTAAATCAACGTTCTCATCAT AGGTTATATAACCATTATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MRCLELNWEIMNKDSSNFLYKYWLKGCEFYNKKDYDKAIEYFSLSNKIFKENVPKCDYYGLREEAYKEILNNNIEEGIKK FDWFVEGILADGDYYNLSGELSTIASIFAKIGKLDITKNFLNSGGEWIYNDVIKDANSEDILKSVLTFDFSYEERKEILN REPHLRKLFEDNIYNFNSDFFDFMMMFFIGAGNWKRFLEVYEEFKNKIKSCQISNEIVNEIIKRFDKSMSDLLAIAHLLK ENYEKCLYYVMLFKEYFDLDEFNEIEKNKINLIVDIAYNLKNGNVKKEEWLNRLNEIYKEIIKRPLPNTYKDAHNDDLLN EILDYYVLKEFIEKKL
Sequences:
>Translated_336_residues MRCLELNWEIMNKDSSNFLYKYWLKGCEFYNKKDYDKAIEYFSLSNKIFKENVPKCDYYGLREEAYKEILNNNIEEGIKK FDWFVEGILADGDYYNLSGELSTIASIFAKIGKLDITKNFLNSGGEWIYNDVIKDANSEDILKSVLTFDFSYEERKEILN REPHLRKLFEDNIYNFNSDFFDFMMMFFIGAGNWKRFLEVYEEFKNKIKSCQISNEIVNEIIKRFDKSMSDLLAIAHLLK ENYEKCLYYVMLFKEYFDLDEFNEIEKNKINLIVDIAYNLKNGNVKKEEWLNRLNEIYKEIIKRPLPNTYKDAHNDDLLN EILDYYVLKEFIEKKL >Mature_336_residues MRCLELNWEIMNKDSSNFLYKYWLKGCEFYNKKDYDKAIEYFSLSNKIFKENVPKCDYYGLREEAYKEILNNNIEEGIKK FDWFVEGILADGDYYNLSGELSTIASIFAKIGKLDITKNFLNSGGEWIYNDVIKDANSEDILKSVLTFDFSYEERKEILN REPHLRKLFEDNIYNFNSDFFDFMMMFFIGAGNWKRFLEVYEEFKNKIKSCQISNEIVNEIIKRFDKSMSDLLAIAHLLK ENYEKCLYYVMLFKEYFDLDEFNEIEKNKINLIVDIAYNLKNGNVKKEEWLNRLNEIYKEIIKRPLPNTYKDAHNDDLLN EILDYYVLKEFIEKKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1348_METJA (Q58743)
Other databases:
- EMBL: L77117 - PIR: C64468 - RefSeq: NP_248350.1 - ProteinModelPortal: Q58743 - GeneID: 1452251 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1348 - NMPDR: fig|243232.1.peg.1387 - TIGR: MJ1348 - OMA: KKEEWLN - ProtClustDB: CLSK2517724 - BioCyc: MJAN243232:MJ_1348-MONOMER - InterPro: IPR011716
Pfam domain/function: PF07720 TPR_3
EC number: NA
Molecular weight: Translated: 40444; Mature: 40444
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCLELNWEIMNKDSSNFLYKYWLKGCEFYNKKDYDKAIEYFSLSNKIFKENVPKCDYYG CCEEECCHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC LREEAYKEILNNNIEEGIKKFDWFVEGILADGDYYNLSGELSTIASIFAKIGKLDITKNF CHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHH LNSGGEWIYNDVIKDANSEDILKSVLTFDFSYEERKEILNREPHLRKLFEDNIYNFNSDF HHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCHH FDFMMMFFIGAGNWKRFLEVYEEFKNKIKSCQISNEIVNEIIKRFDKSMSDLLAIAHLLK HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENYEKCLYYVMLFKEYFDLDEFNEIEKNKINLIVDIAYNLKNGNVKKEEWLNRLNEIYKE HHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHH IIKRPLPNTYKDAHNDDLLNEILDYYVLKEFIEKKL HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRCLELNWEIMNKDSSNFLYKYWLKGCEFYNKKDYDKAIEYFSLSNKIFKENVPKCDYYG CCEEECCHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC LREEAYKEILNNNIEEGIKKFDWFVEGILADGDYYNLSGELSTIASIFAKIGKLDITKNF CHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHH LNSGGEWIYNDVIKDANSEDILKSVLTFDFSYEERKEILNREPHLRKLFEDNIYNFNSDF HHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCHH FDFMMMFFIGAGNWKRFLEVYEEFKNKIKSCQISNEIVNEIIKRFDKSMSDLLAIAHLLK HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENYEKCLYYVMLFKEYFDLDEFNEIEKNKINLIVDIAYNLKNGNVKKEEWLNRLNEIYKE HHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHH IIKRPLPNTYKDAHNDDLLNEILDYYVLKEFIEKKL HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087; 9697413