Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15669531

Identifier: 15669531

GI number: 15669531

Start: 1287920

End: 1288264

Strand: Direct

Name: 15669531

Synonym: MJ1340

Alternate gene names: NA

Gene position: 1287920-1288264 (Clockwise)

Preceding gene: 15669530

Following gene: 15669533

Centisome position: 77.35

GC content: 40.0

Gene sequence:

>345_bases
ATGATTGATAGGGTTTTGTTGGAGTTGAATAAGACTGAGGGTATTAAGGGTTCTATGGTTGTTGGTAAGGATGGTTTAGT
TATTGCCTCTCAATTGCCTGGGAGTGTTGATGCTGAGTTAGTTGGGGCTATGGCTTCAGCAGCATTTGGGGCTGCTGAAA
GAACAGCAGCAGAAATTGGAATGGGTACTTTAGAACAAACAATGATTGAAGGAGAGCACGGTAAAACCCTAATGGTCGAT
GCAGGAGAGGGAATTTTAGTAGTCCTAACTGATGCGAAAGTTAATTTAGGTTTAATCAGAATAACAATGAAAAGAGCCGC
AGAAAAAATAAAAGCAATGTTCTAA

Upstream 100 bases:

>100_bases
TTATAAATAAAATTATGTCCCACACATAACAAATAAATTTAAAAAATTATATATAGCAAAAACGCATAATTTACATAAGC
CAGAGTATAAGGGTGAAAAT

Downstream 100 bases:

>100_bases
AATAATATTATAATTATAAAATAGAGCTTAATGCTATAATAATTTCATTGATAACTTCTCTGTTCAATTCAGAGATATCA
ATTTTCTTTGTTTCAAATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MIDRVLLELNKTEGIKGSMVVGKDGLVIASQLPGSVDAELVGAMASAAFGAAERTAAEIGMGTLEQTMIEGEHGKTLMVD
AGEGILVVLTDAKVNLGLIRITMKRAAEKIKAMF

Sequences:

>Translated_114_residues
MIDRVLLELNKTEGIKGSMVVGKDGLVIASQLPGSVDAELVGAMASAAFGAAERTAAEIGMGTLEQTMIEGEHGKTLMVD
AGEGILVVLTDAKVNLGLIRITMKRAAEKIKAMF
>Mature_114_residues
MIDRVLLELNKTEGIKGSMVVGKDGLVIASQLPGSVDAELVGAMASAAFGAAERTAAEIGMGTLEQTMIEGEHGKTLMVD
AGEGILVVLTDAKVNLGLIRITMKRAAEKIKAMF

Specific function: Unknown

COG id: COG2018

COG function: function code R; Uncharacterized distant relative of homeotic protein bithoraxoid

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0310 and MJ1340 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004942 [H]

Pfam domain/function: PF03259 Robl_LC7 [H]

EC number: NA

Molecular weight: Translated: 11886; Mature: 11886

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
7.0 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.0 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDRVLLELNKTEGIKGSMVVGKDGLVIASQLPGSVDAELVGAMASAAFGAAERTAAEIG
CCCCEEEEECCCCCCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHC
MGTLEQTMIEGEHGKTLMVDAGEGILVVLTDAKVNLGLIRITMKRAAEKIKAMF
CCCHHHHHCCCCCCCEEEEECCCCEEEEEECCCCCEEEEEEEHHHHHHHHHHCC
>Mature Secondary Structure
MIDRVLLELNKTEGIKGSMVVGKDGLVIASQLPGSVDAELVGAMASAAFGAAERTAAEIG
CCCCEEEEECCCCCCCCEEEECCCCEEEEECCCCCCCHHHHHHHHHHHCCCHHHHHHHHC
MGTLEQTMIEGEHGKTLMVDAGEGILVVLTDAKVNLGLIRITMKRAAEKIKAMF
CCCHHHHHCCCCCCCEEEEECCCCEEEEEECCCCCEEEEEEEHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]