Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15669533

Identifier: 15669533

GI number: 15669533

Start: 1289452

End: 1289796

Strand: Direct

Name: 15669533

Synonym: MJ1342

Alternate gene names: NA

Gene position: 1289452-1289796 (Clockwise)

Preceding gene: 15669531

Following gene: 15669536

Centisome position: 77.45

GC content: 28.99

Gene sequence:

>345_bases
ATGTTGTGGGTTCTGGGTGGGAAAAAGATAGCAAAGTGTTTAAAAGAGACAGTTAATCCAAAAGAAATAGAAGATAAGGA
ATTAATAAAATTTTTAATTAATTTTTGTGACATGTGCAATGATTTTGTTATTGATGATGAAAAAATAGGAATAAAAATTG
ATAAGTGTAAATATTGTCCAAAGCAGATTGGAGAAGCAGAAATTCCAGGAAGTGCATGTCCAATTCCCTCAATATTGGCA
AGCTGCATGAGAGAATTGACTAAAAAAGATTACAAAATAAATTTATGGGATGGAAATAAGGTAATAATAAAAGAAAACGG
ATATTGTTGGTTTAGGATTAAATAA

Upstream 100 bases:

>100_bases
ATTATTTAAGAATAGGAGCCTAAAAAAAATCTTCACATTGTTTTAACATCGATGATAGCAGAGTTTTCAAGGTTGGGGAT
TTTAAATCAAGGAACAACAA

Downstream 100 bases:

>100_bases
TTATTGTCCAAAAATAAATTAAAATAAATTAAGAATTTTAGATAACTGTCTCTTCTGGATAAGCAGGCATTTTGTGTTCT
GCCATATCCAATCCCATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MLWVLGGKKIAKCLKETVNPKEIEDKELIKFLINFCDMCNDFVIDDEKIGIKIDKCKYCPKQIGEAEIPGSACPIPSILA
SCMRELTKKDYKINLWDGNKVIIKENGYCWFRIK

Sequences:

>Translated_114_residues
MLWVLGGKKIAKCLKETVNPKEIEDKELIKFLINFCDMCNDFVIDDEKIGIKIDKCKYCPKQIGEAEIPGSACPIPSILA
SCMRELTKKDYKINLWDGNKVIIKENGYCWFRIK
>Mature_114_residues
MLWVLGGKKIAKCLKETVNPKEIEDKELIKFLINFCDMCNDFVIDDEKIGIKIDKCKYCPKQIGEAEIPGSACPIPSILA
SCMRELTKKDYKINLWDGNKVIIKENGYCWFRIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1342_METJA (Q58738)

Other databases:

- EMBL:   L77117
- PIR:   E64467
- RefSeq:   NP_248344.1
- GeneID:   1452245
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1342
- NMPDR:   fig|243232.1.peg.1381
- TIGR:   MJ1342
- OMA:   SILASCM
- ProtClustDB:   CLSK2517722
- BioCyc:   MJAN243232:MJ_1342-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13134; Mature: 13134

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
9.6 %Cys+Met (Translated Protein)
7.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
9.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWVLGGKKIAKCLKETVNPKEIEDKELIKFLINFCDMCNDFVIDDEKIGIKIDKCKYCP
CEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCEEECCCCCCH
KQIGEAEIPGSACPIPSILASCMRELTKKDYKINLWDGNKVIIKENGYCWFRIK
HHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCEEEEEEC
>Mature Secondary Structure
MLWVLGGKKIAKCLKETVNPKEIEDKELIKFLINFCDMCNDFVIDDEKIGIKIDKCKYCP
CEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCEEECCCCCCH
KQIGEAEIPGSACPIPSILASCMRELTKKDYKINLWDGNKVIIKENGYCWFRIK
HHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCEEEEECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087