| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669498
Identifier: 15669498
GI number: 15669498
Start: 1254107
End: 1254433
Strand: Reverse
Name: 15669498
Synonym: MJ1308
Alternate gene names: NA
Gene position: 1254433-1254107 (Counterclockwise)
Preceding gene: 15669499
Following gene: 15669497
Centisome position: 75.34
GC content: 35.17
Gene sequence:
>327_bases TTGGTGGATTTTATGGATTATAATGACTTTCAAAAAAAGTTGGATAAAGAAGAGCATGGGGATGGAATCACAGTTGGAGC AGTTTATACTGGAGAATTTACTCTCTATTTATTGTTTATATTTGGAGCTTTGATTATTGGGAGAGTTTATGGAAAAACTT TGATGACTTTGTTTGGTTTAGCTGCATTAGCTTTCTCTCTGTCAGTGTCTCCTTTAATCTTTAAGTTTAAGGAAGAGAAC TCAAATGCCATAAACTACCAGTTGTTTTGGCTCTCCATATTCTTGGGGGCAATTGCATTCTGCATCTATATGACAACAAG GTGGTAA
Upstream 100 bases:
>100_bases TAATTGGTCTCTATCCAGACATTGTAACAAACTATCTCTGGGACTATGCAAAGGAGTTAGGGGTTAATTATTATTTAAAA TAGACAAAATAACTTAATTT
Downstream 100 bases:
>100_bases AATGAACTCTAAAAGAGATTTAGCTGTTGCCATATCCTTCTTTGTATTTGGGGCATCTGTATTATATAGTTTAGCACACA TGCAGATTAGTCCAGGAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MVDFMDYNDFQKKLDKEEHGDGITVGAVYTGEFTLYLLFIFGALIIGRVYGKTLMTLFGLAALAFSLSVSPLIFKFKEEN SNAINYQLFWLSIFLGAIAFCIYMTTRW
Sequences:
>Translated_108_residues MVDFMDYNDFQKKLDKEEHGDGITVGAVYTGEFTLYLLFIFGALIIGRVYGKTLMTLFGLAALAFSLSVSPLIFKFKEEN SNAINYQLFWLSIFLGAIAFCIYMTTRW >Mature_108_residues MVDFMDYNDFQKKLDKEEHGDGITVGAVYTGEFTLYLLFIFGALIIGRVYGKTLMTLFGLAALAFSLSVSPLIFKFKEEN SNAINYQLFWLSIFLGAIAFCIYMTTRW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1308_METJA (Q58704)
Other databases:
- EMBL: L77117 - PIR: C64463 - RefSeq: NP_248308.1 - ProteinModelPortal: Q58704 - GeneID: 1452210 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1308 - NMPDR: fig|243232.1.peg.1345 - TIGR: MJ1308 - HOGENOM: HBG538964 - OMA: NAINYQL - ProtClustDB: CLSK876521 - BioCyc: MJAN243232:MJ_1308-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12337; Mature: 12337
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xdaee254)-; HASH(0xe5d82ac)-; HASH(0xd759668)-;
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDFMDYNDFQKKLDKEEHGDGITVGAVYTGEFTLYLLFIFGALIIGRVYGKTLMTLFGL CCCCCCCCHHHHHCCHHHCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AALAFSLSVSPLIFKFKEENSNAINYQLFWLSIFLGAIAFCIYMTTRW HHHHHHHCCCHHEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHCCH >Mature Secondary Structure MVDFMDYNDFQKKLDKEEHGDGITVGAVYTGEFTLYLLFIFGALIIGRVYGKTLMTLFGL CCCCCCCCHHHHHCCHHHCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AALAFSLSVSPLIFKFKEENSNAINYQLFWLSIFLGAIAFCIYMTTRW HHHHHHHCCCHHEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087