| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669482
Identifier: 15669482
GI number: 15669482
Start: 1240409
End: 1241122
Strand: Direct
Name: 15669482
Synonym: MJ1292.1
Alternate gene names: NA
Gene position: 1240409-1241122 (Clockwise)
Preceding gene: 15669481
Following gene: 15669483
Centisome position: 74.5
GC content: 28.43
Gene sequence:
>714_bases ATGGGAGTTAGAGAGTGTGTAGTAACAAGGATTATTAAATCAAGACCAATAATTGCTTGTGAGGATGTATATCTGCACAA TTACACTGTCTTTATAAAAATAAGAAATAGAACGCAGGGATTTGTGAAGTATGAGCCAATTGTTGGATATCCTGTTAATG TTACAGTTTCTCTAAAAAGTGCTGTTCCAGATTTAAAAGATATAGAAATCTGGGCTTCTGCAATGGATGAAAATGGCAGA TTAATAAACTGTAGTAAAAAGAAAACCATCGATATTTACGGAAATTATAGAAAAGTTAATCTTGAAATTTTATTCAATGA CTCATTAGAGGGATATTTAATAATATATGCTAAAACTGGGGAGGCAGTTATTCCTCTATATTATAAACCAATTATGGTCA CCTATCCGGTAGTATTTGGTTTAGAATACAATCCTTCAGACCCTTGGGCAAATCTAACACTATCTCATAATTATCAAGTT CCTATAAAGGTTAATGCTACAATAGGTAAATATTCCAAAATAATAACAATCTACCCATATAAAGAGACAAAAGTTCCGTT TTATGTTGGGAAAGATAGAAACAATATAACTGTAAGCATTGAACTACTTAATAATATATCAACGATAAAAAAATTCAAAA AAACATTTTATTTCAAAAAATTAAATAAAATTAAAACTTCTATTAATGAAACAGTAGTTAACAAATATAATTAA
Upstream 100 bases:
>100_bases AGTATTTAAAAATTGGAACAATGGAAGAGATTCCTGTAAATATAAAAACGCTATTTTTAAAGGAATACACGGCCCTATCT ACATACACGTTGCTACAAAT
Downstream 100 bases:
>100_bases TATAACAAACGAAACTAAAATATACAACCAAACTGAAAAAGGAAAAATGACAAATAAAACCAGAAAGGAAACAAATGAAA TTAAAAATAATATCACCCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MGVRECVVTRIIKSRPIIACEDVYLHNYTVFIKIRNRTQGFVKYEPIVGYPVNVTVSLKSAVPDLKDIEIWASAMDENGR LINCSKKKTIDIYGNYRKVNLEILFNDSLEGYLIIYAKTGEAVIPLYYKPIMVTYPVVFGLEYNPSDPWANLTLSHNYQV PIKVNATIGKYSKIITIYPYKETKVPFYVGKDRNNITVSIELLNNISTIKKFKKTFYFKKLNKIKTSINETVVNKYN
Sequences:
>Translated_237_residues MGVRECVVTRIIKSRPIIACEDVYLHNYTVFIKIRNRTQGFVKYEPIVGYPVNVTVSLKSAVPDLKDIEIWASAMDENGR LINCSKKKTIDIYGNYRKVNLEILFNDSLEGYLIIYAKTGEAVIPLYYKPIMVTYPVVFGLEYNPSDPWANLTLSHNYQV PIKVNATIGKYSKIITIYPYKETKVPFYVGKDRNNITVSIELLNNISTIKKFKKTFYFKKLNKIKTSINETVVNKYN >Mature_236_residues GVRECVVTRIIKSRPIIACEDVYLHNYTVFIKIRNRTQGFVKYEPIVGYPVNVTVSLKSAVPDLKDIEIWASAMDENGRL INCSKKKTIDIYGNYRKVNLEILFNDSLEGYLIIYAKTGEAVIPLYYKPIMVTYPVVFGLEYNPSDPWANLTLSHNYQVP IKVNATIGKYSKIITIYPYKETKVPFYVGKDRNNITVSIELLNNISTIKKFKKTFYFKKLNKIKTSINETVVNKYN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): YC9A_METJA (P81333)
Other databases:
- EMBL: L77117 - RefSeq: NP_248292.1 - ProteinModelPortal: P81333 - GeneID: 1452194 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1292.1 - NMPDR: fig|243232.1.peg.1329 - TIGR: MJ1292.1 - BioCyc: MJAN243232:MJ_1292.1-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27349; Mature: 27218
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVRECVVTRIIKSRPIIACEDVYLHNYTVFIKIRNRTQGFVKYEPIVGYPVNVTVSLKS CCHHHHHHHHHHHCCCEEEEEEEEEEEEEEEEEECCCCCCEEEECCEECCCEEEEEEEHH AVPDLKDIEIWASAMDENGRLINCSKKKTIDIYGNYRKVNLEILFNDSLEGYLIIYAKTG CCCCCHHHEEEEECCCCCCCEEEECCCEEEEEEECEEEEEEEEEECCCCCEEEEEEEECC EAVIPLYYKPIMVTYPVVFGLEYNPSDPWANLTLSHNYQVPIKVNATIGKYSKIITIYPY CEEEEEEECCEEEEEEEEEEEEECCCCCCEEEEEECCEEEEEEEEEECCCCEEEEEEEEC KETKVPFYVGKDRNNITVSIELLNNISTIKKFKKTFYFKKLNKIKTSINETVVNKYN CCCCCCEEEECCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC >Mature Secondary Structure GVRECVVTRIIKSRPIIACEDVYLHNYTVFIKIRNRTQGFVKYEPIVGYPVNVTVSLKS CHHHHHHHHHHHCCCEEEEEEEEEEEEEEEEEECCCCCCEEEECCEECCCEEEEEEEHH AVPDLKDIEIWASAMDENGRLINCSKKKTIDIYGNYRKVNLEILFNDSLEGYLIIYAKTG CCCCCHHHEEEEECCCCCCCEEEECCCEEEEEEECEEEEEEEEEECCCCCEEEEEEEECC EAVIPLYYKPIMVTYPVVFGLEYNPSDPWANLTLSHNYQVPIKVNATIGKYSKIITIYPY CEEEEEEECCEEEEEEEEEEEEECCCCCCEEEEEECCEEEEEEEEEECCCCEEEEEEEEC KETKVPFYVGKDRNNITVSIELLNNISTIKKFKKTFYFKKLNKIKTSINETVVNKYN CCCCCCEEEECCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087