| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669483
Identifier: 15669483
GI number: 15669483
Start: 1241169
End: 1241864
Strand: Direct
Name: 15669483
Synonym: MJ1293
Alternate gene names: NA
Gene position: 1241169-1241864 (Clockwise)
Preceding gene: 15669482
Following gene: 15669487
Centisome position: 74.55
GC content: 25.14
Gene sequence:
>696_bases ATGACAAATAAAACCAGAAAGGAAACAAATGAAATTAAAAATAATATCACCCTACCACCAAATATTAAAACTGAGGTAAA TAGAACTAGTAAATATGATTTTACAAATCTCTCTAAAGATTTAGAAATAGTATATGCTCTTATAAAAATTACAGGTTTCG ATGAATATCTACCATTTAATATTGAAAACTTAAATAAAATATTCATTAAAGAAAAAATATCGCCCTACCCATATTTGCTA AATTTAATAAAGGATTTAATAATCCTATTCGTTATTGGATTGATTATAACAATAATCGGCTTATTAATGTATGAACCAAC ACGTCCAAAGGTAATATCTATAATTGCATCCATTCTCTATAAATTAAAAATTAAAGAAAAACCTAAACCTAAGAAAAAAG AAACCATAAAACTACCAAAACCTCCAAAAATCTATATATCTGATGTAATTTATTCATTAGGGGACACAGTAAGAATTGAA ATATCTTCTGAGATAGATATTGGCAATAATTTGTATATACTATCCCCAACAAATAAAAAATACAAAATAGAATTAATAAA AACTGGAAAAAATAAATACCTTGGATTATTCAAAATACCAGAGAATGAAGTTCCAGGGCAATATTTCATTATATATAAAC CAGAAAACTTATCAATTGGAGGGTTTTTAGTAGTAGATATTAAAAAGGAGATGTAA
Upstream 100 bases:
>100_bases TTAAATAAAATTAAAACTTCTATTAATGAAACAGTAGTTAACAAATATAATTAATATAACAAACGAAACTAAAATATACA ACCAAACTGAAAAAGGAAAA
Downstream 100 bases:
>100_bases TTTATTCTATTTTTTTCAAATCAATAAAATTTATTGAAGAAGGTTTGAACACCTCCAAAGGAAGGCGTTTATTAGTGCGT TAGTTATCTAAGAAGTTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MTNKTRKETNEIKNNITLPPNIKTEVNRTSKYDFTNLSKDLEIVYALIKITGFDEYLPFNIENLNKIFIKEKISPYPYLL NLIKDLIILFVIGLIITIIGLLMYEPTRPKVISIIASILYKLKIKEKPKPKKKETIKLPKPPKIYISDVIYSLGDTVRIE ISSEIDIGNNLYILSPTNKKYKIELIKTGKNKYLGLFKIPENEVPGQYFIIYKPENLSIGGFLVVDIKKEM
Sequences:
>Translated_231_residues MTNKTRKETNEIKNNITLPPNIKTEVNRTSKYDFTNLSKDLEIVYALIKITGFDEYLPFNIENLNKIFIKEKISPYPYLL NLIKDLIILFVIGLIITIIGLLMYEPTRPKVISIIASILYKLKIKEKPKPKKKETIKLPKPPKIYISDVIYSLGDTVRIE ISSEIDIGNNLYILSPTNKKYKIELIKTGKNKYLGLFKIPENEVPGQYFIIYKPENLSIGGFLVVDIKKEM >Mature_230_residues TNKTRKETNEIKNNITLPPNIKTEVNRTSKYDFTNLSKDLEIVYALIKITGFDEYLPFNIENLNKIFIKEKISPYPYLLN LIKDLIILFVIGLIITIIGLLMYEPTRPKVISIIASILYKLKIKEKPKPKKKETIKLPKPPKIYISDVIYSLGDTVRIEI SSEIDIGNNLYILSPTNKKYKIELIKTGKNKYLGLFKIPENEVPGQYFIIYKPENLSIGGFLVVDIKKEM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1293_METJA (Q58689)
Other databases:
- EMBL: L77117 - PIR: D64461 - RefSeq: NP_248293.1 - ProteinModelPortal: Q58689 - GeneID: 1452195 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1293 - NMPDR: fig|243232.1.peg.1330 - TIGR: MJ1293 - BioCyc: MJAN243232:MJ_1293-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26686; Mature: 26555
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xe5370d8)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNKTRKETNEIKNNITLPPNIKTEVNRTSKYDFTNLSKDLEIVYALIKITGFDEYLPFN CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC IENLNKIFIKEKISPYPYLLNLIKDLIILFVIGLIITIIGLLMYEPTRPKVISIIASILY CCCHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH KLKIKEKPKPKKKETIKLPKPPKIYISDVIYSLGDTVRIEISSEIDIGNNLYILSPTNKK HEECCCCCCCCCCCEEECCCCCCCHHHHHHHHCCCEEEEEEECCEECCCCEEEECCCCCE YKIELIKTGKNKYLGLFKIPENEVPGQYFIIYKPENLSIGGFLVVDIKKEM EEEEEEECCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCEEEEEEECCH >Mature Secondary Structure TNKTRKETNEIKNNITLPPNIKTEVNRTSKYDFTNLSKDLEIVYALIKITGFDEYLPFN CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCC IENLNKIFIKEKISPYPYLLNLIKDLIILFVIGLIITIIGLLMYEPTRPKVISIIASILY CCCHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH KLKIKEKPKPKKKETIKLPKPPKIYISDVIYSLGDTVRIEISSEIDIGNNLYILSPTNKK HEECCCCCCCCCCCEEECCCCCCCHHHHHHHHCCCEEEEEEECCEECCCCEEEECCCCCE YKIELIKTGKNKYLGLFKIPENEVPGQYFIIYKPENLSIGGFLVVDIKKEM EEEEEEECCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCEEEEEEECCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087