| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is leuA2
Identifier: 15669381
GI number: 15669381
Start: 1137352
End: 1138908
Strand: Reverse
Name: leuA2
Synonym: MJ1195
Alternate gene names: 15669381
Gene position: 1138908-1137352 (Counterclockwise)
Preceding gene: 15669382
Following gene: 15669378
Centisome position: 68.4
GC content: 36.35
Gene sequence:
>1557_bases ATGATAATTTATAGGGAAGAGAATGAAATTATAAAAAAGGCACTTGAGAATTTAAACATTCCAGATAGGGTTTATATCTT TGACACAACACTCAGAGATGGAGAGCAAACTCCAGGTGTCTCTTTAACTCCAGAGGAGAAAATAGACATAGCCATAAAAT TAGATGATTTAGGAGTTGATGTTATTGAGGCTGGTTTTCCAGTATCATCATTAGGAGAGCAGGAGGCTATTAAAAAAATC TGCTCATTAAACTTAGATGCTGAAATCTGCGGATTGGCAAGGGCTGTAAAAAAGGATATAGATGTAGCTATAGATTGCGG AGTTGATAGAATCCATACATTTATAGCAACCTCTCCATTGCATAGAAAATATAAATTAAAAAAATCAAAGGAAGAGATTA TTGATATTGCAGTTGATGCCATAGAGTACATAAAAGAACATGGGATTAGAGTTGAGTTTTCAGCAGAAGATGCAACAAGA ACAGAGATTGACTATTTAATAGAAGTTTATAAAAAGGCAGTAGATGCTGGAGCAGATATAATCAACGTTCCAGATACCGT TGGAGTTATGATTCCAAGGGCTATGTATTATCTAATAAATGAGCTAAAGAAGGAAATAAAAGTCCCTATATCTGTGCATT GCCACAACGACTTTGGTTTAGCTGTTGCAAACTCATTGGCAGCAGTTGAAGCAGGAGCAGAGCAAGTACATTGTACAATA AACGGCTTAGGAGAGAGAGGAGGAAATGCAGCATTGGAAGAGGTAGTTATGAGCTTAATGTCAATCTATGGAGTTAAAAC TAATATAAAAACACAAAAACTTTATGAGATATCTCAGCTTGTATCAAAATACACTGAAATTAAAGTCCAACCAAACAAGG CAATTGTTGGAGAGAACGCTTTCGCTCATGAAAGTGGAATACATGCACATGGAGTTTTAGCTCATGCTTTAACCTATGAA CCTATACCCCCAGAGTTAGTTGGGCAGAAGAGAAAAATAATCTTAGGTAAGCACACAGGAACACATGCAATTGAGGCAAA GTTAAAAGAATTAGGAATTGAGGTTGGTAAGGATATAAATAAAGATCAATTTGATGAGATAGTTAAGAGAATTAAAGCTC TTGGAGATAAAGGAAAGAGAGTCACTGACAGAGATGTTGAGGCAATAGTTGAGGATGTTGTTGGTAAGTTGGCTAAAAAA GATAGAGTTGTTGAGTTGGAGCAAATAGCGGTTATGACAGGTAATAGAGTTATTCCAACTGCATCAGTTGCTTTAAAGAT TGAAGAAGAGATTAAGAAGAGCTCAGCTATTGGTGTTGGACCAGTAGATGCGGCAGTTAAGGCAATACAAAAAGCCATTG GAGAGAAGATTAAACTTAAAGAGTATCATATAAATGCCATAACTGGAGGAACTGATGCATTGGCGGAGGTTATTGTAACC TTAGAAGGATATGGAAGGGAGATAACAACAAAGGCAGCAAGTGAAGATATAGTTAGGGCTTCAGTTGAGGCAGTTATAGA TGGAATCAACAAAATCTTGGCAAAAAGAGAAAAATGA
Upstream 100 bases:
>100_bases AAAGGTTAAGTTATAGCGTTTTAATGATATATCTGATTAGGTAAAATTTTTATAACATCCCATCATAAATAACAGAAAAT TAAAAAGTTTTGGTGGGATT
Downstream 100 bases:
>100_bases TTTCATCTCCTTATAAATTAATATAAAAATAAAATTATTTTTTATTTTATAAAATTTAATTTATGAATTCAAATAAACTA ATTAAAATCTCCAAAATAAT
Product: 2-isopropylmalate synthase
Products: NA
Alternate protein names: Alpha-IPM synthase 2; Alpha-isopropylmalate synthase 2
Number of amino acids: Translated: 518; Mature: 518
Protein sequence:
>518_residues MIIYREENEIIKKALENLNIPDRVYIFDTTLRDGEQTPGVSLTPEEKIDIAIKLDDLGVDVIEAGFPVSSLGEQEAIKKI CSLNLDAEICGLARAVKKDIDVAIDCGVDRIHTFIATSPLHRKYKLKKSKEEIIDIAVDAIEYIKEHGIRVEFSAEDATR TEIDYLIEVYKKAVDAGADIINVPDTVGVMIPRAMYYLINELKKEIKVPISVHCHNDFGLAVANSLAAVEAGAEQVHCTI NGLGERGGNAALEEVVMSLMSIYGVKTNIKTQKLYEISQLVSKYTEIKVQPNKAIVGENAFAHESGIHAHGVLAHALTYE PIPPELVGQKRKIILGKHTGTHAIEAKLKELGIEVGKDINKDQFDEIVKRIKALGDKGKRVTDRDVEAIVEDVVGKLAKK DRVVELEQIAVMTGNRVIPTASVALKIEEEIKKSSAIGVGPVDAAVKAIQKAIGEKIKLKEYHINAITGGTDALAEVIVT LEGYGREITTKAASEDIVRASVEAVIDGINKILAKREK
Sequences:
>Translated_518_residues MIIYREENEIIKKALENLNIPDRVYIFDTTLRDGEQTPGVSLTPEEKIDIAIKLDDLGVDVIEAGFPVSSLGEQEAIKKI CSLNLDAEICGLARAVKKDIDVAIDCGVDRIHTFIATSPLHRKYKLKKSKEEIIDIAVDAIEYIKEHGIRVEFSAEDATR TEIDYLIEVYKKAVDAGADIINVPDTVGVMIPRAMYYLINELKKEIKVPISVHCHNDFGLAVANSLAAVEAGAEQVHCTI NGLGERGGNAALEEVVMSLMSIYGVKTNIKTQKLYEISQLVSKYTEIKVQPNKAIVGENAFAHESGIHAHGVLAHALTYE PIPPELVGQKRKIILGKHTGTHAIEAKLKELGIEVGKDINKDQFDEIVKRIKALGDKGKRVTDRDVEAIVEDVVGKLAKK DRVVELEQIAVMTGNRVIPTASVALKIEEEIKKSSAIGVGPVDAAVKAIQKAIGEKIKLKEYHINAITGGTDALAEVIVT LEGYGREITTKAASEDIVRASVEAVIDGINKILAKREK >Mature_518_residues MIIYREENEIIKKALENLNIPDRVYIFDTTLRDGEQTPGVSLTPEEKIDIAIKLDDLGVDVIEAGFPVSSLGEQEAIKKI CSLNLDAEICGLARAVKKDIDVAIDCGVDRIHTFIATSPLHRKYKLKKSKEEIIDIAVDAIEYIKEHGIRVEFSAEDATR TEIDYLIEVYKKAVDAGADIINVPDTVGVMIPRAMYYLINELKKEIKVPISVHCHNDFGLAVANSLAAVEAGAEQVHCTI NGLGERGGNAALEEVVMSLMSIYGVKTNIKTQKLYEISQLVSKYTEIKVQPNKAIVGENAFAHESGIHAHGVLAHALTYE PIPPELVGQKRKIILGKHTGTHAIEAKLKELGIEVGKDINKDQFDEIVKRIKALGDKGKRVTDRDVEAIVEDVVGKLAKK DRVVELEQIAVMTGNRVIPTASVALKIEEEIKKSSAIGVGPVDAAVKAIQKAIGEKIKLKEYHINAITGGTDALAEVIVT LEGYGREITTKAASEDIVRASVEAVIDGINKILAKREK
Specific function: Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
COG id: COG0119
COG function: function code E; Isopropylmalate/homocitrate/citramalate synthases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily
Homologues:
Organism=Homo sapiens, GI62198232, Length=305, Percent_Identity=27.5409836065574, Blast_Score=74, Evalue=3e-13, Organism=Escherichia coli, GI1786261, Length=510, Percent_Identity=40.5882352941176, Blast_Score=344, Evalue=9e-96, Organism=Saccharomyces cerevisiae, GI6320019, Length=382, Percent_Identity=36.3874345549738, Blast_Score=223, Evalue=8e-59, Organism=Saccharomyces cerevisiae, GI6320071, Length=376, Percent_Identity=36.1702127659575, Blast_Score=222, Evalue=1e-58, Organism=Saccharomyces cerevisiae, GI6324682, Length=559, Percent_Identity=24.5080500894454, Blast_Score=127, Evalue=5e-30, Organism=Saccharomyces cerevisiae, GI6324225, Length=571, Percent_Identity=24.8686514886165, Blast_Score=118, Evalue=2e-27, Organism=Drosophila melanogaster, GI24582381, Length=305, Percent_Identity=24.9180327868852, Blast_Score=72, Evalue=7e-13,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): LEU12_METJA (Q58595)
Other databases:
- EMBL: L77117 - PIR: B64449 - RefSeq: NP_248190.1 - ProteinModelPortal: Q58595 - SMR: Q58595 - GeneID: 1452090 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1195 - NMPDR: fig|243232.1.peg.1227 - TIGR: MJ1195 - HOGENOM: HBG701974 - OMA: CAHVTIN - ProtClustDB: PRK00915 - BioCyc: MJAN243232:MJ_1195-MONOMER - BRENDA: 2.3.3.13 - HAMAP: MF_01025_A - InterPro: IPR013709 - InterPro: IPR002034 - InterPro: IPR013785 - InterPro: IPR011830 - InterPro: IPR000891 - Gene3D: G3DSA:3.20.20.70 - SMART: SM00917 - TIGRFAMs: TIGR02090
Pfam domain/function: PF00682 HMGL-like; PF08502 LeuA_dimer; SSF110921 2-isopropylmalate_synth_dimer
EC number: =2.3.3.13
Molecular weight: Translated: 56621; Mature: 56621
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: PS00815 AIPM_HOMOCIT_SYNTH_1; PS00816 AIPM_HOMOCIT_SYNTH_2; PS50991 PYR_CT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIYREENEIIKKALENLNIPDRVYIFDTTLRDGEQTPGVSLTPEEKIDIAIKLDDLGVD CEEEECHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCH VIEAGFPVSSLGEQEAIKKICSLNLDAEICGLARAVKKDIDVAIDCGVDRIHTFIATSPL HHHCCCCHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCH HRKYKLKKSKEEIIDIAVDAIEYIKEHGIRVEFSAEDATRTEIDYLIEVYKKAVDAGADI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCE INVPDTVGVMIPRAMYYLINELKKEIKVPISVHCHNDFGLAVANSLAAVEAGAEQVHCTI EECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEE NGLGERGGNAALEEVVMSLMSIYGVKTNIKTQKLYEISQLVSKYTEIKVQPNKAIVGENA ECCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEECCCCEEECCCC FAHESGIHAHGVLAHALTYEPIPPELVGQKRKIILGKHTGTHAIEAKLKELGIEVGKDIN CCCCCCCCHHHHHHHHHCCCCCCHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCC KDQFDEIVKRIKALGDKGKRVTDRDVEAIVEDVVGKLAKKDRVVELEQIAVMTGNRVIPT HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHCCCEECCC ASVALKIEEEIKKSSAIGVGPVDAAVKAIQKAIGEKIKLKEYHINAITGGTDALAEVIVT HHHEEEEHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEEECCCHHHHHHHHHH LEGYGREITTKAASEDIVRASVEAVIDGINKILAKREK HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIIYREENEIIKKALENLNIPDRVYIFDTTLRDGEQTPGVSLTPEEKIDIAIKLDDLGVD CEEEECHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCH VIEAGFPVSSLGEQEAIKKICSLNLDAEICGLARAVKKDIDVAIDCGVDRIHTFIATSPL HHHCCCCHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHCCCH HRKYKLKKSKEEIIDIAVDAIEYIKEHGIRVEFSAEDATRTEIDYLIEVYKKAVDAGADI HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCE INVPDTVGVMIPRAMYYLINELKKEIKVPISVHCHNDFGLAVANSLAAVEAGAEQVHCTI EECCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEE NGLGERGGNAALEEVVMSLMSIYGVKTNIKTQKLYEISQLVSKYTEIKVQPNKAIVGENA ECCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEECCCCEEECCCC FAHESGIHAHGVLAHALTYEPIPPELVGQKRKIILGKHTGTHAIEAKLKELGIEVGKDIN CCCCCCCCHHHHHHHHHCCCCCCHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCC KDQFDEIVKRIKALGDKGKRVTDRDVEAIVEDVVGKLAKKDRVVELEQIAVMTGNRVIPT HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHCCCEECCC ASVALKIEEEIKKSSAIGVGPVDAAVKAIQKAIGEKIKLKEYHINAITGGTDALAEVIVT HHHEEEEHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEEEECCCHHHHHHHHHH LEGYGREITTKAASEDIVRASVEAVIDGINKILAKREK HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087