| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669371
Identifier: 15669371
GI number: 15669371
Start: 1121084
End: 1122184
Strand: Direct
Name: 15669371
Synonym: MJ1182
Alternate gene names: NA
Gene position: 1121084-1122184 (Clockwise)
Preceding gene: 15669370
Following gene: 15669372
Centisome position: 67.33
GC content: 28.52
Gene sequence:
>1101_bases ATGCAAGTATGTATTATTGGAGCGGGATTGTCAGGATCTATATTGTACAGATTACTTTCGGAAGACGGTTTTTACATAAA TATTTATGACCATGTATTAGTTAGAGGCTGCAAAAGTATGAATTTTATATTTTCCAATAAAAATGAGATTTTAACAGTAA AAAAAGTTTTAAAAACGGTAAATATAAACATTAAAGATTATATAATTAGAGAGATAAAGGAAGTAAATATTGGTGGAGAT AACTACTATCCTAATAAAAAAATTTATGTCATAAATAAATCCAAACTAATTGAAGACTTGGTTCCAAGAACAGTAGTTAC AAATAGAGAATTTAATCCAGTCATAAGGAGGTATACAACAAAAGTTATTGATACTGGAGTTATAGTGAGAGAATTTAATA CTGAAGCTGAAACTAAATTTTATGATTTGGTCGTTGATGCTTCTGGATGTGCTAAAGTACTTCAATTAGGCAATGTGTAT GATAAATATAAAAATGATATTAAAACCTGTCAATTTTTAATAGCCTATGAAAATGAAGAATCTCCAGAAAAATTTGATAA ATTCTTTATTGATGAAATAAAGATACATAAAGGAAAACCTATGATTGGTTATACTTGGATAACTCCTATAGACGATGGAC TATATCATGTTGGATGTGCATACTATAAAAACGACCATGAGTTATGGACATACCTCACAAAATACACTAAAAAAATGTTT GGTAGTGATTACGTTAGAGTCTGTGGATGTACATCAAAAATAAATGGAAATTTAATTTCTGAGAGTTTTATTGGAGGAAT ATACGAGAAGAGGTGTGTTGCAGGCGTTGGAGAAAGTATAGGTTTAACAACACCTTTAGGACATGGGAATATATATGCAA TTATTTCTGCGTATATCTTATCAAGATTTATAAAAAAATATGACCTGAATGAAGCAGTATTAAAATACAAAGACTATATC CCAAAAAAATTTGCTGAATTAGATAAAGAAAAGAAAGCTGTGAGAAATTTTAATGTGTTAAGGATTACAAAACTACTAAG AGATTACTATAACATTCCAGCTCATGAATCTATGAAAATTATCCTTAAATCTCTCTACTAA
Upstream 100 bases:
>100_bases TTAATTCATATGTCAATTTTTGAAATGATTTATTTTTATTATAGTAAAATATATGAAATCTTAATTTTAAATCTGTTGTA TTGGTTTAAGGGTGTGATTT
Downstream 100 bases:
>100_bases TTGGGTGATATCATGACATTAAAACTATTAAAAGAAGAAAATGGGCTTTCTCCAATGCTAAGAGAGTTTAGAACTTTAGT AAGAGATAGTAATATAGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MQVCIIGAGLSGSILYRLLSEDGFYINIYDHVLVRGCKSMNFIFSNKNEILTVKKVLKTVNINIKDYIIREIKEVNIGGD NYYPNKKIYVINKSKLIEDLVPRTVVTNREFNPVIRRYTTKVIDTGVIVREFNTEAETKFYDLVVDASGCAKVLQLGNVY DKYKNDIKTCQFLIAYENEESPEKFDKFFIDEIKIHKGKPMIGYTWITPIDDGLYHVGCAYYKNDHELWTYLTKYTKKMF GSDYVRVCGCTSKINGNLISESFIGGIYEKRCVAGVGESIGLTTPLGHGNIYAIISAYILSRFIKKYDLNEAVLKYKDYI PKKFAELDKEKKAVRNFNVLRITKLLRDYYNIPAHESMKIILKSLY
Sequences:
>Translated_366_residues MQVCIIGAGLSGSILYRLLSEDGFYINIYDHVLVRGCKSMNFIFSNKNEILTVKKVLKTVNINIKDYIIREIKEVNIGGD NYYPNKKIYVINKSKLIEDLVPRTVVTNREFNPVIRRYTTKVIDTGVIVREFNTEAETKFYDLVVDASGCAKVLQLGNVY DKYKNDIKTCQFLIAYENEESPEKFDKFFIDEIKIHKGKPMIGYTWITPIDDGLYHVGCAYYKNDHELWTYLTKYTKKMF GSDYVRVCGCTSKINGNLISESFIGGIYEKRCVAGVGESIGLTTPLGHGNIYAIISAYILSRFIKKYDLNEAVLKYKDYI PKKFAELDKEKKAVRNFNVLRITKLLRDYYNIPAHESMKIILKSLY >Mature_366_residues MQVCIIGAGLSGSILYRLLSEDGFYINIYDHVLVRGCKSMNFIFSNKNEILTVKKVLKTVNINIKDYIIREIKEVNIGGD NYYPNKKIYVINKSKLIEDLVPRTVVTNREFNPVIRRYTTKVIDTGVIVREFNTEAETKFYDLVVDASGCAKVLQLGNVY DKYKNDIKTCQFLIAYENEESPEKFDKFFIDEIKIHKGKPMIGYTWITPIDDGLYHVGCAYYKNDHELWTYLTKYTKKMF GSDYVRVCGCTSKINGNLISESFIGGIYEKRCVAGVGESIGLTTPLGHGNIYAIISAYILSRFIKKYDLNEAVLKYKDYI PKKFAELDKEKKAVRNFNVLRITKLLRDYYNIPAHESMKIILKSLY
Specific function: Unknown
COG id: COG0644
COG function: function code C; Dehydrogenases (flavoproteins)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1182_METJA (Q58582)
Other databases:
- EMBL: L77117 - PIR: E64447 - RefSeq: NP_248176.1 - ProteinModelPortal: Q58582 - GeneID: 1452080 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1182 - NMPDR: fig|243232.1.peg.1213 - TIGR: MJ1182 - OMA: CAYYKND - ProtClustDB: CLSK2517699 - BioCyc: MJAN243232:MJ_1182-MONOMER - GO: GO:0005488 - InterPro: IPR016040 - Gene3D: G3DSA:3.40.50.720
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42217; Mature: 42217
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVCIIGAGLSGSILYRLLSEDGFYINIYDHVLVRGCKSMNFIFSNKNEILTVKKVLKTV CEEEEEECCCCHHHHHHHHHCCCCEEEEHHHHHHHHHCCCEEEECCCCCEEHHHHHHHHH NINIKDYIIREIKEVNIGGDNYYPNKKIYVINKSKLIEDLVPRTVVTNREFNPVIRRYTT CCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHCCCCEECCCCCCHHHHHHHH KVIDTGVIVREFNTEAETKFYDLVVDASGCAKVLQLGNVYDKYKNDIKTCQFLIAYENEE HHHHCCEEEEECCCCHHCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCC SPEKFDKFFIDEIKIHKGKPMIGYTWITPIDDGLYHVGCAYYKNDHELWTYLTKYTKKMF CHHHHHHHHHHHEEEECCCCEEEEEEECCCCCCHHHEEEEEEECCHHHHHHHHHHHHHHH GSDYVRVCGCTSKINGNLISESFIGGIYEKRCVAGVGESIGLTTPLGHGNIYAIISAYIL CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH SRFIKKYDLNEAVLKYKDYIPKKFAELDKEKKAVRNFNVLRITKLLRDYYNIPAHESMKI HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHH ILKSLY HHHHCC >Mature Secondary Structure MQVCIIGAGLSGSILYRLLSEDGFYINIYDHVLVRGCKSMNFIFSNKNEILTVKKVLKTV CEEEEEECCCCHHHHHHHHHCCCCEEEEHHHHHHHHHCCCEEEECCCCCEEHHHHHHHHH NINIKDYIIREIKEVNIGGDNYYPNKKIYVINKSKLIEDLVPRTVVTNREFNPVIRRYTT CCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHCCCCEECCCCCCHHHHHHHH KVIDTGVIVREFNTEAETKFYDLVVDASGCAKVLQLGNVYDKYKNDIKTCQFLIAYENEE HHHHCCEEEEECCCCHHCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCC SPEKFDKFFIDEIKIHKGKPMIGYTWITPIDDGLYHVGCAYYKNDHELWTYLTKYTKKMF CHHHHHHHHHHHEEEECCCCEEEEEEECCCCCCHHHEEEEEEECCHHHHHHHHHHHHHHH GSDYVRVCGCTSKINGNLISESFIGGIYEKRCVAGVGESIGLTTPLGHGNIYAIISAYIL CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH SRFIKKYDLNEAVLKYKDYIPKKFAELDKEKKAVRNFNVLRITKLLRDYYNIPAHESMKI HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHH ILKSLY HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087