Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15669372

Identifier: 15669372

GI number: 15669372

Start: 1122185

End: 1122670

Strand: Direct

Name: 15669372

Synonym: MJ1183

Alternate gene names: NA

Gene position: 1122185-1122670 (Clockwise)

Preceding gene: 15669371

Following gene: 15669373

Centisome position: 67.4

GC content: 30.86

Gene sequence:

>486_bases
TTGGGTGATATCATGACATTAAAACTATTAAAAGAAGAAAATGGGCTTTCTCCAATGCTAAGAGAGTTTAGAACTTTAGT
AAGAGATAGTAATATAGAGAAGGTTGCATTTGTCGGTTCTGTTGGTGTCTGCCAACCCTTTGCTGAATTATTTGGTTATG
CAATACGAGATAAAGAATGTTACTTTATCCCAGATGGAGATTTAAACAAAGTTAAAAAACTTGTTATTAAAGATATAGGC
ATGCAGATGGAAGATTTTGAAAACTTAAATAAAGTAGATGCAATTGTTTTATTTGGTGGTTTGGCAATGCCAAAGTATGG
AGTAGAAGTAGATAAAATTAAGGAACTAATAAATAAACTATCCCCTAAAAAAGTTATTGGAGTTTGCTTTATGAGTATTT
TCCAAAAAGCAGGGTGGGATAAAGAAATTGACTTTGACTATCTAATGGACGGTTTTATTAAAGTAAGCATATATTGTAAA
GATTAA

Upstream 100 bases:

>100_bases
GAGAAATTTTAATGTGTTAAGGATTACAAAACTACTAAGAGATTACTATAACATTCCAGCTCATGAATCTATGAAAATTA
TCCTTAAATCTCTCTACTAA

Downstream 100 bases:

>100_bases
AGATTAATAAGGTGAAAATTTGACAAAAAAGGTGGGAATTGTAGATACAACATTTGCAAGGGTGGATATGGCTTCCATAG
CTATAAAAAAGTTAAAAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MGDIMTLKLLKEENGLSPMLREFRTLVRDSNIEKVAFVGSVGVCQPFAELFGYAIRDKECYFIPDGDLNKVKKLVIKDIG
MQMEDFENLNKVDAIVLFGGLAMPKYGVEVDKIKELINKLSPKKVIGVCFMSIFQKAGWDKEIDFDYLMDGFIKVSIYCK
D

Sequences:

>Translated_161_residues
MGDIMTLKLLKEENGLSPMLREFRTLVRDSNIEKVAFVGSVGVCQPFAELFGYAIRDKECYFIPDGDLNKVKKLVIKDIG
MQMEDFENLNKVDAIVLFGGLAMPKYGVEVDKIKELINKLSPKKVIGVCFMSIFQKAGWDKEIDFDYLMDGFIKVSIYCK
D
>Mature_160_residues
GDIMTLKLLKEENGLSPMLREFRTLVRDSNIEKVAFVGSVGVCQPFAELFGYAIRDKECYFIPDGDLNKVKKLVIKDIGM
QMEDFENLNKVDAIVLFGGLAMPKYGVEVDKIKELINKLSPKKVIGVCFMSIFQKAGWDKEIDFDYLMDGFIKVSIYCKD

Specific function: Unknown

COG id: COG4090

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.thermoautotrophicum MTH862

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1183_METJA (Q58583)

Other databases:

- EMBL:   L77117
- PIR:   F64447
- RefSeq:   NP_248177.1
- ProteinModelPortal:   Q58583
- SMR:   Q58583
- GeneID:   1452081
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1183
- NMPDR:   fig|243232.1.peg.1214
- TIGR:   MJ1183
- HOGENOM:   HBG538949
- OMA:   LNAYAVR
- ProtClustDB:   CLSK876488
- BioCyc:   MJAN243232:MJ_1183-MONOMER
- InterPro:   IPR009183
- PIRSF:   PIRSF004962

Pfam domain/function: PF09897 DUF2124

EC number: NA

Molecular weight: Translated: 18310; Mature: 18179

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDIMTLKLLKEENGLSPMLREFRTLVRDSNIEKVAFVGSVGVCQPFAELFGYAIRDKEC
CCCHHHHHEECCCCCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCEE
YFIPDGDLNKVKKLVIKDIGMQMEDFENLNKVDAIVLFGGLAMPKYGVEVDKIKELINKL
EEECCCCHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHC
SPKKVIGVCFMSIFQKAGWDKEIDFDYLMDGFIKVSIYCKD
CHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCEEEEEEEECC
>Mature Secondary Structure 
GDIMTLKLLKEENGLSPMLREFRTLVRDSNIEKVAFVGSVGVCQPFAELFGYAIRDKEC
CCHHHHHEECCCCCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCEE
YFIPDGDLNKVKKLVIKDIGMQMEDFENLNKVDAIVLFGGLAMPKYGVEVDKIKELINKL
EEECCCCHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHC
SPKKVIGVCFMSIFQKAGWDKEIDFDYLMDGFIKVSIYCKD
CHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087