| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669372
Identifier: 15669372
GI number: 15669372
Start: 1122185
End: 1122670
Strand: Direct
Name: 15669372
Synonym: MJ1183
Alternate gene names: NA
Gene position: 1122185-1122670 (Clockwise)
Preceding gene: 15669371
Following gene: 15669373
Centisome position: 67.4
GC content: 30.86
Gene sequence:
>486_bases TTGGGTGATATCATGACATTAAAACTATTAAAAGAAGAAAATGGGCTTTCTCCAATGCTAAGAGAGTTTAGAACTTTAGT AAGAGATAGTAATATAGAGAAGGTTGCATTTGTCGGTTCTGTTGGTGTCTGCCAACCCTTTGCTGAATTATTTGGTTATG CAATACGAGATAAAGAATGTTACTTTATCCCAGATGGAGATTTAAACAAAGTTAAAAAACTTGTTATTAAAGATATAGGC ATGCAGATGGAAGATTTTGAAAACTTAAATAAAGTAGATGCAATTGTTTTATTTGGTGGTTTGGCAATGCCAAAGTATGG AGTAGAAGTAGATAAAATTAAGGAACTAATAAATAAACTATCCCCTAAAAAAGTTATTGGAGTTTGCTTTATGAGTATTT TCCAAAAAGCAGGGTGGGATAAAGAAATTGACTTTGACTATCTAATGGACGGTTTTATTAAAGTAAGCATATATTGTAAA GATTAA
Upstream 100 bases:
>100_bases GAGAAATTTTAATGTGTTAAGGATTACAAAACTACTAAGAGATTACTATAACATTCCAGCTCATGAATCTATGAAAATTA TCCTTAAATCTCTCTACTAA
Downstream 100 bases:
>100_bases AGATTAATAAGGTGAAAATTTGACAAAAAAGGTGGGAATTGTAGATACAACATTTGCAAGGGTGGATATGGCTTCCATAG CTATAAAAAAGTTAAAAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 160
Protein sequence:
>161_residues MGDIMTLKLLKEENGLSPMLREFRTLVRDSNIEKVAFVGSVGVCQPFAELFGYAIRDKECYFIPDGDLNKVKKLVIKDIG MQMEDFENLNKVDAIVLFGGLAMPKYGVEVDKIKELINKLSPKKVIGVCFMSIFQKAGWDKEIDFDYLMDGFIKVSIYCK D
Sequences:
>Translated_161_residues MGDIMTLKLLKEENGLSPMLREFRTLVRDSNIEKVAFVGSVGVCQPFAELFGYAIRDKECYFIPDGDLNKVKKLVIKDIG MQMEDFENLNKVDAIVLFGGLAMPKYGVEVDKIKELINKLSPKKVIGVCFMSIFQKAGWDKEIDFDYLMDGFIKVSIYCK D >Mature_160_residues GDIMTLKLLKEENGLSPMLREFRTLVRDSNIEKVAFVGSVGVCQPFAELFGYAIRDKECYFIPDGDLNKVKKLVIKDIGM QMEDFENLNKVDAIVLFGGLAMPKYGVEVDKIKELINKLSPKKVIGVCFMSIFQKAGWDKEIDFDYLMDGFIKVSIYCKD
Specific function: Unknown
COG id: COG4090
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.thermoautotrophicum MTH862
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1183_METJA (Q58583)
Other databases:
- EMBL: L77117 - PIR: F64447 - RefSeq: NP_248177.1 - ProteinModelPortal: Q58583 - SMR: Q58583 - GeneID: 1452081 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1183 - NMPDR: fig|243232.1.peg.1214 - TIGR: MJ1183 - HOGENOM: HBG538949 - OMA: LNAYAVR - ProtClustDB: CLSK876488 - BioCyc: MJAN243232:MJ_1183-MONOMER - InterPro: IPR009183 - PIRSF: PIRSF004962
Pfam domain/function: PF09897 DUF2124
EC number: NA
Molecular weight: Translated: 18310; Mature: 18179
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDIMTLKLLKEENGLSPMLREFRTLVRDSNIEKVAFVGSVGVCQPFAELFGYAIRDKEC CCCHHHHHEECCCCCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCEE YFIPDGDLNKVKKLVIKDIGMQMEDFENLNKVDAIVLFGGLAMPKYGVEVDKIKELINKL EEECCCCHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHC SPKKVIGVCFMSIFQKAGWDKEIDFDYLMDGFIKVSIYCKD CHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCEEEEEEEECC >Mature Secondary Structure GDIMTLKLLKEENGLSPMLREFRTLVRDSNIEKVAFVGSVGVCQPFAELFGYAIRDKEC CCHHHHHEECCCCCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCEE YFIPDGDLNKVKKLVIKDIGMQMEDFENLNKVDAIVLFGGLAMPKYGVEVDKIKELINKL EEECCCCHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHC SPKKVIGVCFMSIFQKAGWDKEIDFDYLMDGFIKVSIYCKD CHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087