Click here to switch to the map view.

The map label for this gene is sgcQ [C]

Identifier: 15669302

GI number: 15669302

Start: 1055876

End: 1056661

Strand: Reverse

Name: sgcQ [C]

Synonym: MJ1115

Alternate gene names: 15669302

Gene position: 1056661-1055876 (Counterclockwise)

Preceding gene: 15669303

Following gene: 15669301

Centisome position: 63.46

GC content: 33.97

Gene sequence:

>786_bases
GTGATACCTATGTTTAAGAAAAAACCATTGATTGGGATGGTTCATCTAAAACCATTGCCTGGTAGTTATCATTACAATGA
CAACTTTGATGATATTGTAGATTTTGCTATAAAAGAAGCTAAAAAACTTGAAGAAGCTGGATTTGATGCTGTAATGATAG
AAAACTTTGGAGATGCTCCATTTAAAAAAGAGGCTGATAAGATAACCATTGCATCAATGGCTGTAATAGCAAAAGCTATA
AAAGAGGAGGTATCTCTCCCATTGGGAATAAATATCTTAAGAAACGATGCTATAGGGGCTTACTCCATAGCTTATGTTGT
TAAAGCAGATTTTATTAGAGTTAATGTCTTATCTGGTGTTGCATTTACAGACCAAGGGATTATCGAAGGCAAAGCTTATG
AATTAGCCAAGCTAAAAAAGTTGCTTCCAAGTAAGATAAAGGTTTTTGCAGATGTTCATGTAAAGCATGCATATCATTTT
ATAGACTTTGAAAGCTCATTGTTGGATACCGTTGAGAGAGGTTTAGCTGATGCTGTAATTATCAGCGGTAAGAGAACGGG
AAAGGAGGTTGATATTGAAAAGCTAAAATTAGCTAAGGAATTGGTTGATGTTCCAGTTATTGTTGGTTCTGGAACAAATT
ATAACAACCTAAGAATCCTCTGGAGCTATGCAGATGGTTTTATAATTGGGACATGGATAAAGAAAGATGGGAAAGCCAAT
AATGAGATTGATATTGATAGGGCTAAAAAGATTGTAAATTTAGCTAATAAATTAAAAATGTGCTAA

Upstream 100 bases:

>100_bases
AGGTTGCTAAGAAATATGGATTTTCAAAGAAGAGAATTAATGAGTTTTTAGATATGTTGAAGAGGAAGATTGTTAGTGAA
TTTTAAAATTATAAGCTAGT

Downstream 100 bases:

>100_bases
TTTTGATAGAAAGTTATATATAGAAGTTCTAATATTTTTATTTATTGACAAGAAATGAACAAAAGTAGGATAATGGTGAT
ATTATGGACATAGTTGAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MIPMFKKKPLIGMVHLKPLPGSYHYNDNFDDIVDFAIKEAKKLEEAGFDAVMIENFGDAPFKKEADKITIASMAVIAKAI
KEEVSLPLGINILRNDAIGAYSIAYVVKADFIRVNVLSGVAFTDQGIIEGKAYELAKLKKLLPSKIKVFADVHVKHAYHF
IDFESSLLDTVERGLADAVIISGKRTGKEVDIEKLKLAKELVDVPVIVGSGTNYNNLRILWSYADGFIIGTWIKKDGKAN
NEIDIDRAKKIVNLANKLKMC

Sequences:

>Translated_261_residues
MIPMFKKKPLIGMVHLKPLPGSYHYNDNFDDIVDFAIKEAKKLEEAGFDAVMIENFGDAPFKKEADKITIASMAVIAKAI
KEEVSLPLGINILRNDAIGAYSIAYVVKADFIRVNVLSGVAFTDQGIIEGKAYELAKLKKLLPSKIKVFADVHVKHAYHF
IDFESSLLDTVERGLADAVIISGKRTGKEVDIEKLKLAKELVDVPVIVGSGTNYNNLRILWSYADGFIIGTWIKKDGKAN
NEIDIDRAKKIVNLANKLKMC
>Mature_261_residues
MIPMFKKKPLIGMVHLKPLPGSYHYNDNFDDIVDFAIKEAKKLEEAGFDAVMIENFGDAPFKKEADKITIASMAVIAKAI
KEEVSLPLGINILRNDAIGAYSIAYVVKADFIRVNVLSGVAFTDQGIIEGKAYELAKLKKLLPSKIKVFADVHVKHAYHF
IDFESSLLDTVERGLADAVIISGKRTGKEVDIEKLKLAKELVDVPVIVGSGTNYNNLRILWSYADGFIIGTWIKKDGKAN
NEIDIDRAKKIVNLANKLKMC

Specific function: Unknown

COG id: COG0434

COG function: function code R; Predicted TIM-barrel enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BtpA family

Homologues:

Organism=Escherichia coli, GI1790757, Length=259, Percent_Identity=27.4131274131274, Blast_Score=91, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI115532828, Length=263, Percent_Identity=30.4182509505703, Blast_Score=105, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24659916, Length=252, Percent_Identity=30.5555555555556, Blast_Score=117, Evalue=9e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1115_METJA (Q58515)

Other databases:

- EMBL:   L77117
- PIR:   B64439
- RefSeq:   NP_248107.1
- ProteinModelPortal:   Q58515
- GeneID:   1452011
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1115
- NMPDR:   fig|243232.1.peg.1144
- TIGR:   MJ1115
- HOGENOM:   HBG315906
- OMA:   ENFFDAP
- ProtClustDB:   CLSK541429
- BioCyc:   MJAN243232:MJ_1115-MONOMER
- InterPro:   IPR013785
- InterPro:   IPR005137
- InterPro:   IPR011060
- Gene3D:   G3DSA:3.20.20.70
- PANTHER:   PTHR21381
- ProDom:   PD011184
- TIGRFAMs:   TIGR00259

Pfam domain/function: PF03437 BtpA; SSF51366 RibP_bind_barrel

EC number: NA

Molecular weight: Translated: 28939; Mature: 28939

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPMFKKKPLIGMVHLKPLPGSYHYNDNFDDIVDFAIKEAKKLEEAGFDAVMIENFGDAP
CCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
FKKEADKITIASMAVIAKAIKEEVSLPLGINILRNDAIGAYSIAYVVKADFIRVNVLSGV
CCCCCCEEHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHEEECCEEEEEEECCE
AFTDQGIIEGKAYELAKLKKLLPSKIKVFADVHVKHAYHFIDFESSLLDTVERGLADAVI
EECCCCCCCCCHHHHHHHHHHCHHHHHHHHEEEEEHEEEEECCHHHHHHHHHHCCCCEEE
ISGKRTGKEVDIEKLKLAKELVDVPVIVGSGTNYNNLRILWSYADGFIIGTWIKKDGKAN
EECCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEECCCEEEEEEEECCCCCC
NEIDIDRAKKIVNLANKLKMC
CCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIPMFKKKPLIGMVHLKPLPGSYHYNDNFDDIVDFAIKEAKKLEEAGFDAVMIENFGDAP
CCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
FKKEADKITIASMAVIAKAIKEEVSLPLGINILRNDAIGAYSIAYVVKADFIRVNVLSGV
CCCCCCEEHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHEEECCEEEEEEECCE
AFTDQGIIEGKAYELAKLKKLLPSKIKVFADVHVKHAYHFIDFESSLLDTVERGLADAVI
EECCCCCCCCCHHHHHHHHHHCHHHHHHHHEEEEEHEEEEECCHHHHHHHHHHCCCCEEE
ISGKRTGKEVDIEKLKLAKELVDVPVIVGSGTNYNNLRILWSYADGFIIGTWIKKDGKAN
EECCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCEEEEEEECCCEEEEEEEECCCCCC
NEIDIDRAKKIVNLANKLKMC
CCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087