| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
Click here to switch to the map view.
The map label for this gene is 15669239
Identifier: 15669239
GI number: 15669239
Start: 987437
End: 987970
Strand: Direct
Name: 15669239
Synonym: MJ1050
Alternate gene names: NA
Gene position: 987437-987970 (Clockwise)
Preceding gene: 15669238
Following gene: 15669243
Centisome position: 59.31
GC content: 28.65
Gene sequence:
>534_bases ATGAGAATAGCAATAACTGGAACTCCAGGAGTTGGGAAAACAACAATTTCAAAAGTTTTGAGAGACAGATTAGGAATAAA AGTTATTGATATAACTGAGGCTGTTAAGAAATATAAGCTATATACTGAAAAAGATGAAGATATGGACTCTTATGTTATTG ATTTTGAGAAATTGGAAAAATTTATTGATGAGATTGAGGAAAAAGAAAAAACTATTATATTAGATGGTCATGTATCTCAT CTTTTGAATCCCGACTATATTATAGTTCTTAGATGCAATCCAGAAATTATCAAAGAAAGGTTAGAAAAAAGGGGCTATAA GCCAAAAAAGGTTTTGGAAAATATTCAGGCAGAAATTTTAGATGTGTGCTTATGTGAGAGTAAAGGCAAGGTTTATGAGA TAGATACAACAAATAGAGATGTTGAAAATATAGTTGATGAGATTATTGAAGCAATAAAACATAAAAAAGAGAGAAAAGGA GTTGTAGATTGGACAGAGAAATACTTTGATTATTTAACTTTAGAAATTAAATAA
Upstream 100 bases:
>100_bases TCAAATATTACGGACGATGCTGAAAATGTGTAAAACTAATTAATATATAATAATTAATTATTTTAGTTCATTTTTATCTT GTTAATTTTTTGGTGGTTAA
Downstream 100 bases:
>100_bases TTCCCTAACAACAAAGCATCAAAATCTGCCTTTAAAAAGCTATTTATTGCATCTTTCTCATTGCAAACTATCGGCTCTCC ATGTAAATTAAAGGATGTGT
Product: putative kinase
Products: NA
Alternate protein names: ATP-AMP transphosphorylase
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MRIAITGTPGVGKTTISKVLRDRLGIKVIDITEAVKKYKLYTEKDEDMDSYVIDFEKLEKFIDEIEEKEKTIILDGHVSH LLNPDYIIVLRCNPEIIKERLEKRGYKPKKVLENIQAEILDVCLCESKGKVYEIDTTNRDVENIVDEIIEAIKHKKERKG VVDWTEKYFDYLTLEIK
Sequences:
>Translated_177_residues MRIAITGTPGVGKTTISKVLRDRLGIKVIDITEAVKKYKLYTEKDEDMDSYVIDFEKLEKFIDEIEEKEKTIILDGHVSH LLNPDYIIVLRCNPEIIKERLEKRGYKPKKVLENIQAEILDVCLCESKGKVYEIDTTNRDVENIVDEIIEAIKHKKERKG VVDWTEKYFDYLTLEIK >Mature_177_residues MRIAITGTPGVGKTTISKVLRDRLGIKVIDITEAVKKYKLYTEKDEDMDSYVIDFEKLEKFIDEIEEKEKTIILDGHVSH LLNPDYIIVLRCNPEIIKERLEKRGYKPKKVLENIQAEILDVCLCESKGKVYEIDTTNRDVENIVDEIIEAIKHKKERKG VVDWTEKYFDYLTLEIK
Specific function: Unknown
COG id: COG1936
COG function: function code F; Predicted nucleotide kinase (related to CMP and AMP kinases)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylate kinase family. AK6 subfamily
Homologues:
Organism=Homo sapiens, GI7706212, Length=164, Percent_Identity=32.9268292682927, Blast_Score=84, Evalue=5e-17, Organism=Homo sapiens, GI62865612, Length=159, Percent_Identity=32.7044025157233, Blast_Score=80, Evalue=6e-16, Organism=Caenorhabditis elegans, GI17532769, Length=130, Percent_Identity=33.8461538461538, Blast_Score=79, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6320035, Length=124, Percent_Identity=32.258064516129, Blast_Score=68, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KAD6_METJA (Q58450)
Other databases:
- EMBL: L77117 - PIR: A64431 - RefSeq: NP_248044.1 - ProteinModelPortal: Q58450 - SMR: Q58450 - GeneID: 1451947 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1050 - NMPDR: fig|243232.1.peg.1081 - TIGR: MJ1050 - HOGENOM: HBG646389 - OMA: RVGIVDW - ProtClustDB: PRK03839 - BioCyc: MJAN243232:MJ_1050-MONOMER - BRENDA: 2.7.4.3 - HAMAP: MF_00039 - InterPro: IPR020618 - InterPro: IPR000623
Pfam domain/function: PF01202 SKI
EC number: =2.7.4.3
Molecular weight: Translated: 20690; Mature: 20690
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIAITGTPGVGKTTISKVLRDRLGIKVIDITEAVKKYKLYTEKDEDMDSYVIDFEKLEK CEEEEECCCCCCHHHHHHHHHHHHCEEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH FIDEIEEKEKTIILDGHVSHLLNPDYIIVLRCNPEIIKERLEKRGYKPKKVLENIQAEIL HHHHHHHCCCEEEEECCHHHHCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHH DVCLCESKGKVYEIDTTNRDVENIVDEIIEAIKHKKERKGVVDWTEKYFDYLTLEIK HHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEEEC >Mature Secondary Structure MRIAITGTPGVGKTTISKVLRDRLGIKVIDITEAVKKYKLYTEKDEDMDSYVIDFEKLEK CEEEEECCCCCCHHHHHHHHHHHHCEEEEHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH FIDEIEEKEKTIILDGHVSHLLNPDYIIVLRCNPEIIKERLEKRGYKPKKVLENIQAEIL HHHHHHHCCCEEEEECCHHHHCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHH DVCLCESKGKVYEIDTTNRDVENIVDEIIEAIKHKKERKGVVDWTEKYFDYLTLEIK HHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087