Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

Click here to switch to the map view.

The map label for this gene is 15669238

Identifier: 15669238

GI number: 15669238

Start: 986884

End: 987369

Strand: Direct

Name: 15669238

Synonym: MJ1049

Alternate gene names: NA

Gene position: 986884-987369 (Clockwise)

Preceding gene: 15669237

Following gene: 15669239

Centisome position: 59.27

GC content: 28.81

Gene sequence:

>486_bases
ATGGTCATAAAAAAAATTATAAAGAAGATTAGAGGAAATAAAGACTTACCAAAACCTATTGAAGTCCCTGATGAAGAGTA
TATAGTTATTGGAGAAGAAAAACCAGCTTATATATTAGAGGAAGAATCAGAAACTGAATCAGAAGTTTTAGGGTTAGAAC
ATAAGGAAAAGGAAGAAGTAAAAGAAGTGGAAGAGGTTGTTAGAGTAGAAAAGATTCTTCCAAAATTGTATGTTGTTAGG
ATTAAACATCCTTTAGACTTTGAAAATATAAAAGATAAAATCCCAGAATATGACGTTGTAATTGTAAATTTTGAGGAAGT
ACCTTTTGAATCTATTTTAAAAGAGCTTAATGAATTTAGGGATTATATGAGTATTTTAAATTTTAAATTAGGGTTTGTTG
CTGAGAATGTGTTGTTAGCTTATAGAGATGACGTGATATTGGATAAATATGTTTCAAATATTACGGACGATGCTGAAAAT
GTGTAA

Upstream 100 bases:

>100_bases
TTGATAAAAACTTAACTTGACAATCTCATCCTTATAAAAGTTAAACTTATATAATAAAACATTAAAATAACATTTTAAGA
TTTAGAAGAGGGATGGAATT

Downstream 100 bases:

>100_bases
AACTAATTAATATATAATAATTAATTATTTTAGTTCATTTTTATCTTGTTAATTTTTTGGTGGTTAAATGAGAATAGCAA
TAACTGGAACTCCAGGAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MVIKKIIKKIRGNKDLPKPIEVPDEEYIVIGEEKPAYILEEESETESEVLGLEHKEKEEVKEVEEVVRVEKILPKLYVVR
IKHPLDFENIKDKIPEYDVVIVNFEEVPFESILKELNEFRDYMSILNFKLGFVAENVLLAYRDDVILDKYVSNITDDAEN
V

Sequences:

>Translated_161_residues
MVIKKIIKKIRGNKDLPKPIEVPDEEYIVIGEEKPAYILEEESETESEVLGLEHKEKEEVKEVEEVVRVEKILPKLYVVR
IKHPLDFENIKDKIPEYDVVIVNFEEVPFESILKELNEFRDYMSILNFKLGFVAENVLLAYRDDVILDKYVSNITDDAEN
V
>Mature_161_residues
MVIKKIIKKIRGNKDLPKPIEVPDEEYIVIGEEKPAYILEEESETESEVLGLEHKEKEEVKEVEEVVRVEKILPKLYVVR
IKHPLDFENIKDKIPEYDVVIVNFEEVPFESILKELNEFRDYMSILNFKLGFVAENVLLAYRDDVILDKYVSNITDDAEN
V

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1049_METJA (Q58449)

Other databases:

- EMBL:   L77117
- PIR:   H64430
- RefSeq:   NP_248043.1
- ProteinModelPortal:   Q58449
- GeneID:   1451946
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1049
- NMPDR:   fig|243232.1.peg.1080
- TIGR:   MJ1049
- HOGENOM:   HBG541143
- OMA:   EVPFESI
- ProtClustDB:   CLSK876436
- BioCyc:   MJAN243232:MJ_1049-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18880; Mature: 18880

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIKKIIKKIRGNKDLPKPIEVPDEEYIVIGEEKPAYILEEESETESEVLGLEHKEKEEV
CCHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCEEECCCCCHHHHHHCCCCCHHHHH
KEVEEVVRVEKILPKLYVVRIKHPLDFENIKDKIPEYDVVIVNFEEVPFESILKELNEFR
HHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHH
DYMSILNFKLGFVAENVLLAYRDDVILDKYVSNITDDAENV
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MVIKKIIKKIRGNKDLPKPIEVPDEEYIVIGEEKPAYILEEESETESEVLGLEHKEKEEV
CCHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCEEECCCCCHHHHHHCCCCCHHHHH
KEVEEVVRVEKILPKLYVVRIKHPLDFENIKDKIPEYDVVIVNFEEVPFESILKELNEFR
HHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHH
DYMSILNFKLGFVAENVLLAYRDDVILDKYVSNITDDAENV
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087