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The map label for this gene is nusA

Identifier: 15669234

GI number: 15669234

Start: 981964

End: 982515

Strand: Direct

Name: nusA

Synonym: MJ1045

Alternate gene names: NA

Gene position: 981964-982515 (Clockwise)

Preceding gene: 15669233

Following gene: 15669235

Centisome position: 58.98

GC content: 31.88

Gene sequence:

>552_bases
ATGGCTAAGGTAAGATTAACAACAGAAGAGATTATGAAGATTGGATTTTTTGAAAAAATTGCAAATGTCCCTATTCTTGA
CTGTGTATTAAATGATGAAAGAGTTGCTTTTATTGTAAAGGAGGGTGATGTAGGAGCGGCAATTGGGAAGGGTGGAGAGA
ACGTTAAAACAGCAGAAGAGAAATTTGGAAAGAAAGTTGATATTATTGAGTACTCAGACGACTGGAGAAAGTTTATAAGA
AATATATTCGCACCAATACAGTTAGATGATGTTTGGGTTAAAAGAGTTGGAAAGGATGTTGTTGCTTTTATTAAAATAAA
TCCAAAAGTTAGAAGAGCGGTTTTTGGAGAAAAAGGCAAGAACTTAGAAAGAGCTTTAAAGATTTTAAAAAGACATACAA
AAATTACAAAAATAAAAGTTATTGTTGAAAATCAAAAATTTAAAAGAAAAAGAGCAAAAAGACCTGTAGTTAAAGACCAA
CAGCAAGAACAGACTGAAACTAAGCAAGAAACAGACGTTCAACAGGATGTAAAGGAAACTGTTAAAGAGTAA

Upstream 100 bases:

>100_bases
CGGTTTGTGGGAAACCTTTCCCAGTTGCTGCTCTTTTGGTTTTAGATGAAGGGCTCTCAAACATTATGGAGCTGGTAGAG
AAAAAGGAAGGTGGTGAATA

Downstream 100 bases:

>100_bases
AAGTATTTATAAAAGTATTTATCTTTATATGCTATATGCTGTATGGGAAAATCATTGTGTAATCTTTCCAAATTATTACT
TGAATTATTAAATTACTCAA

Product: transcription elongation factor NusA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MAKVRLTTEEIMKIGFFEKIANVPILDCVLNDERVAFIVKEGDVGAAIGKGGENVKTAEEKFGKKVDIIEYSDDWRKFIR
NIFAPIQLDDVWVKRVGKDVVAFIKINPKVRRAVFGEKGKNLERALKILKRHTKITKIKVIVENQKFKRKRAKRPVVKDQ
QQEQTETKQETDVQQDVKETVKE

Sequences:

>Translated_183_residues
MAKVRLTTEEIMKIGFFEKIANVPILDCVLNDERVAFIVKEGDVGAAIGKGGENVKTAEEKFGKKVDIIEYSDDWRKFIR
NIFAPIQLDDVWVKRVGKDVVAFIKINPKVRRAVFGEKGKNLERALKILKRHTKITKIKVIVENQKFKRKRAKRPVVKDQ
QQEQTETKQETDVQQDVKETVKE
>Mature_182_residues
AKVRLTTEEIMKIGFFEKIANVPILDCVLNDERVAFIVKEGDVGAAIGKGGENVKTAEEKFGKKVDIIEYSDDWRKFIRN
IFAPIQLDDVWVKRVGKDVVAFIKINPKVRRAVFGEKGKNLERALKILKRHTKITKIKVIVENQKFKRKRAKRPVVKDQQ
QEQTETKQETDVQQDVKETVKE

Specific function: Unknown

COG id: COG0195

COG function: function code K; Transcription elongation factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NUSA_METJA (Q58447)

Other databases:

- EMBL:   L77117
- PIR:   D64430
- RefSeq:   NP_248039.1
- ProteinModelPortal:   Q58447
- SMR:   Q58447
- GeneID:   1451942
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1045
- NMPDR:   fig|243232.1.peg.1076
- TIGR:   MJ1045
- HOGENOM:   HBG541227
- OMA:   YIALFES
- BioCyc:   MJAN243232:MJ_1045-MONOMER
- InterPro:   IPR004087
- InterPro:   IPR015946
- InterPro:   IPR009019
- InterPro:   IPR004088
- InterPro:   IPR004044
- InterPro:   IPR010212
- Gene3D:   G3DSA:3.30.300.20
- SMART:   SM00322
- TIGRFAMs:   TIGR01952

Pfam domain/function: PF07650 KH_2; SSF54814 KH_prok

EC number: NA

Molecular weight: Translated: 21135; Mature: 21004

Theoretical pI: Translated: 10.47; Mature: 10.47

Prosite motif: PS50084 KH_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKVRLTTEEIMKIGFFEKIANVPILDCVLNDERVAFIVKEGDVGAAIGKGGENVKTAEE
CCEEEECHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEECCCCCHHHCCCCCCCCHHHH
KFGKKVDIIEYSDDWRKFIRNIFAPIQLDDVWVKRVGKDVVAFIKINPKVRRAVFGEKGK
HCCCEEEEEEECHHHHHHHHHHHCCCCCHHHHHHHHCHHEEEEEEECHHHHHHHHCCCCC
NLERALKILKRHTKITKIKVIVENQKFKRKRAKRPVVKDQQQEQTETKQETDVQQDVKET
CHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VKE
HCC
>Mature Secondary Structure 
AKVRLTTEEIMKIGFFEKIANVPILDCVLNDERVAFIVKEGDVGAAIGKGGENVKTAEE
CEEEECHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEECCCCCHHHCCCCCCCCHHHH
KFGKKVDIIEYSDDWRKFIRNIFAPIQLDDVWVKRVGKDVVAFIKINPKVRRAVFGEKGK
HCCCEEEEEEECHHHHHHHHHHHCCCCCHHHHHHHHCHHEEEEEEECHHHHHHHHCCCCC
NLERALKILKRHTKITKIKVIVENQKFKRKRAKRPVVKDQQQEQTETKQETDVQQDVKET
CHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
VKE
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087