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The map label for this gene is yfdV [C]

Identifier: 15669220

GI number: 15669220

Start: 962931

End: 963857

Strand: Direct

Name: yfdV [C]

Synonym: MJ1031

Alternate gene names: 15669220

Gene position: 962931-963857 (Clockwise)

Preceding gene: 15669219

Following gene: 15669221

Centisome position: 57.83

GC content: 31.07

Gene sequence:

>927_bases
GTGATACCCATGGATGTTGTTTTAATTGTCTTAATTTTAGTTTTAGTTGGGTATTTTTCAAAAATCTTTGGGATTTTAAA
AGAAGAACATGCAAAGATTTTAAACAATATCGTTATTTACATTGCTATGCCTTCAACGATATTTTTAACTATATCAAAAA
ATGTCTCCTCATCTCAGATATTAGAATTTTTAAAGCTTCCAGTGGTCATTTTTTTATGCTGTTTATTTGTTGGGATATTG
GCTTATTTACTTGGAAAGCACATCTTTAAATTAAAGGATGAAAAGCTTGGAGGATTAATTTTGGTATCAATGCTTGGAAA
TACTGGATTTTTAGGTTATCCAGTAGCTTTGGGAATGTTTGGTGAAGAGGGATTGGCAAGAGCTATATTCTGCGACTTAG
GAGGAGTTTTTGCTACAATGCTATTAGGAACTTATGTTGGGATAAGATTTGGAAAAGGTAGAGATAAAAGCATCCTAAAA
GATATGGCTAAATTCCCTCCCTTAATAACTGGAATTCTATCAATAATCTTAGTATTTTTTGGTTTTAAATTAAATTATAT
TCCAAGCTTTATCTTAAAATCTTTAAATTATCTATCTTCAGCAACTGTCCCTTTAATCATGATGTCTTTGGGTTTATCTC
TCTCACCAAAGGCTTTAAAGTTTGGAGTCTTTTGGGGAATTATAGCGTCAATATTTAGATTCATTGTATCTCCAGCTACT
GCCTTTACGTTATCTGAACTAATCAATATAAAAGGTTTAGAGAAGAATGTTTTATTGGTTGAGAGTTCTATGCCTTCAGC
AATGATGACGCTCGTTTTAGGGACATTATATGAGTTAGATATTAAATTGATAGCTTCATCTATATTTATTACAACAACTT
TCTCTCTATTAGTCATTGCCCTTTGGGGATGGATTTTATTAAATTAA

Upstream 100 bases:

>100_bases
AGATAGTTATCTTCAAACCTATATTAGCTGAAGATGGAAAGCCAATATCAACAACGAGGATTAGAAAGGGAGAGATAGAT
GAAGAGGGGAGAATAATAAA

Downstream 100 bases:

>100_bases
ATAATTTTTAATTAATTAAAAGGTATATATAACATTAAATAGTGTAACTATAATTATCTGTTATTTTTAAGAATGTTGGC
ATTGTTTATCTTGTTTATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MIPMDVVLIVLILVLVGYFSKIFGILKEEHAKILNNIVIYIAMPSTIFLTISKNVSSSQILEFLKLPVVIFLCCLFVGIL
AYLLGKHIFKLKDEKLGGLILVSMLGNTGFLGYPVALGMFGEEGLARAIFCDLGGVFATMLLGTYVGIRFGKGRDKSILK
DMAKFPPLITGILSIILVFFGFKLNYIPSFILKSLNYLSSATVPLIMMSLGLSLSPKALKFGVFWGIIASIFRFIVSPAT
AFTLSELINIKGLEKNVLLVESSMPSAMMTLVLGTLYELDIKLIASSIFITTTFSLLVIALWGWILLN

Sequences:

>Translated_308_residues
MIPMDVVLIVLILVLVGYFSKIFGILKEEHAKILNNIVIYIAMPSTIFLTISKNVSSSQILEFLKLPVVIFLCCLFVGIL
AYLLGKHIFKLKDEKLGGLILVSMLGNTGFLGYPVALGMFGEEGLARAIFCDLGGVFATMLLGTYVGIRFGKGRDKSILK
DMAKFPPLITGILSIILVFFGFKLNYIPSFILKSLNYLSSATVPLIMMSLGLSLSPKALKFGVFWGIIASIFRFIVSPAT
AFTLSELINIKGLEKNVLLVESSMPSAMMTLVLGTLYELDIKLIASSIFITTTFSLLVIALWGWILLN
>Mature_308_residues
MIPMDVVLIVLILVLVGYFSKIFGILKEEHAKILNNIVIYIAMPSTIFLTISKNVSSSQILEFLKLPVVIFLCCLFVGIL
AYLLGKHIFKLKDEKLGGLILVSMLGNTGFLGYPVALGMFGEEGLARAIFCDLGGVFATMLLGTYVGIRFGKGRDKSILK
DMAKFPPLITGILSIILVFFGFKLNYIPSFILKSLNYLSSATVPLIMMSLGLSLSPKALKFGVFWGIIASIFRFIVSPAT
AFTLSELINIKGLEKNVLLVESSMPSAMMTLVLGTLYELDIKLIASSIFITTTFSLLVIALWGWILLN

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the auxin efflux carrier (TC 2.A.69) family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1031_METJA (Q58437)

Other databases:

- EMBL:   L77117
- PIR:   F64428
- RefSeq:   NP_248025.1
- ProteinModelPortal:   Q58437
- GeneID:   1451928
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1031
- NMPDR:   fig|243232.1.peg.1062
- TIGR:   MJ1031
- HOGENOM:   HBG538934
- OMA:   ANTSSHW
- ProtClustDB:   CLSK876432
- BioCyc:   MJAN243232:MJ_1031-MONOMER
- InterPro:   IPR004776
- InterPro:   IPR014024
- TIGRFAMs:   TIGR00946

Pfam domain/function: PF03547 Mem_trans

EC number: NA

Molecular weight: Translated: 33771; Mature: 33771

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xdf07fb0)-; HASH(0xdfaa5c8)-; HASH(0xdfd27b4)-; HASH(0xd574c30)-; HASH(0xd987de4)-; HASH(0xe08d8ac)-; HASH(0xde94730)-; HASH(0xde87588)-; HASH(0xdc6f2fc)-; HASH(0xd0e3660)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPMDVVLIVLILVLVGYFSKIFGILKEEHAKILNNIVIYIAMPSTIFLTISKNVSSSQI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCEEEEEEECCCCHHHH
LEFLKLPVVIFLCCLFVGILAYLLGKHIFKLKDEKLGGLILVSMLGNTGFLGYPVALGMF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEHHCCCCCCHHHHHHHCC
GEEGLARAIFCDLGGVFATMLLGTYVGIRFGKGRDKSILKDMAKFPPLITGILSIILVFF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHH
GFKLNYIPSFILKSLNYLSSATVPLIMMSLGLSLSPKALKFGVFWGIIASIFRFIVSPAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHH
AFTLSELINIKGLEKNVLLVESSMPSAMMTLVLGTLYELDIKLIASSIFITTTFSLLVIA
HHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LWGWILLN
HHHHHHCH
>Mature Secondary Structure
MIPMDVVLIVLILVLVGYFSKIFGILKEEHAKILNNIVIYIAMPSTIFLTISKNVSSSQI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCEEEEEEECCCCHHHH
LEFLKLPVVIFLCCLFVGILAYLLGKHIFKLKDEKLGGLILVSMLGNTGFLGYPVALGMF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEHHCCCCCCHHHHHHHCC
GEEGLARAIFCDLGGVFATMLLGTYVGIRFGKGRDKSILKDMAKFPPLITGILSIILVFF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHH
GFKLNYIPSFILKSLNYLSSATVPLIMMSLGLSLSPKALKFGVFWGIIASIFRFIVSPAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHH
AFTLSELINIKGLEKNVLLVESSMPSAMMTLVLGTLYELDIKLIASSIFITTTFSLLVIA
HHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LWGWILLN
HHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087