| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669221
Identifier: 15669221
GI number: 15669221
Start: 963984
End: 965084
Strand: Direct
Name: 15669221
Synonym: MJ1032
Alternate gene names: NA
Gene position: 963984-965084 (Clockwise)
Preceding gene: 15669220
Following gene: 15669222
Centisome position: 57.9
GC content: 28.88
Gene sequence:
>1101_bases ATGGAAAAGGAAGGAGTAAAAAATTATCTTGTTCTTGTTGTTGATATTGATGACGATATTGGAAGAAAAGCTGGTCTAAA CACACCAATTTTAGGTAGGGAGGAAAACATAAAGGCATTGATAAAATTAGGTTTGGCAGACCCTGGAGATAGCGATGTTA ATGCAATTCTTGGAGGGGTTAAGATTTACGATGAGTTAAAAGCAAGTGGAAAAGATGTTGAAATAGCTACAATTTCTGGA GATGTTGATGTTGAATCAGAGAAATGTGCATTGAGAATAAAGGAGCAGATAGACTTTTTGTTATATCTGTATAATCCAGA TTTTATTTATTTGGTATCTGATGGAAAAGAGGATGAGATGATTTTAAAATACTTGGAGTCAAAAAATATTTTTGTGTGGA AGAAGAGAGTTATAGTTAAGCAGAGTGAAACCTTAGAATCCACTTATTATTTAATCCAAGAGTTTATTAAAAAGACCATG GAAGAATATATCCCATTAATTTTAACATTTATTGGATTTTCTTTAATATTGTATGCGATATTTGCAGATATAGGTTGGAG AATTGTTGTTGGAATTATTGGGTTATATATATTATCGGAAGGAGTGGGTGTTAGAAAGTTATTAATGGAGAAAATTAAAA AGAAAGAAGAGTTTGATGTAGGGAGGGTTTTTCCTATCTCTGCATCTATATCTATATTTATTTTAATTATTGGACTAATA TACTCATTAAGTTCTATTAATAAAACTTCATCAACACTTACAGAATTTATAGGAGAATTTTTATTGCACTTTGTGGATTC TTTAACACTTTCATTGTTGATTTTAATGGTTGGGAAATTTGTAGATACCATTATCAACTCAGAAAAAGACCTTTTAGAAA TACTTAAAAAGTATTTTTTCTGTTTGATATGTATATTCATATCGAGAGAACTGATTATTTCTGGTGGGGAATACCTACTA AAAAAGATAAGCTTTATAATGTTTGTTATGTGTGTTATAATTTACATATCTATTGTTATTATTCTTTCAGTTATCCTATT TACAAAAAGTTCAAAAGAAGATAAATTCAAAAAATTAAAAAATAGCATCACAAAGGGCTAA
Upstream 100 bases:
>100_bases ATATAACATTAAATAGTGTAACTATAATTATCTGTTATTTTTAAGAATGTTGGCATTGTTTATCTTGTTTATCATTATTT GCCTATGAGAGGGAGTAAGG
Downstream 100 bases:
>100_bases TATGATTACGGTAATTGCTATAGCTAAAGATGGCAGTATTGTCGAGCCAAAACTTGATGAAATTAGCTTTGAAGATTATA GACTTATTTGGATTGATTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MEKEGVKNYLVLVVDIDDDIGRKAGLNTPILGREENIKALIKLGLADPGDSDVNAILGGVKIYDELKASGKDVEIATISG DVDVESEKCALRIKEQIDFLLYLYNPDFIYLVSDGKEDEMILKYLESKNIFVWKKRVIVKQSETLESTYYLIQEFIKKTM EEYIPLILTFIGFSLILYAIFADIGWRIVVGIIGLYILSEGVGVRKLLMEKIKKKEEFDVGRVFPISASISIFILIIGLI YSLSSINKTSSTLTEFIGEFLLHFVDSLTLSLLILMVGKFVDTIINSEKDLLEILKKYFFCLICIFISRELIISGGEYLL KKISFIMFVMCVIIYISIVIILSVILFTKSSKEDKFKKLKNSITKG
Sequences:
>Translated_366_residues MEKEGVKNYLVLVVDIDDDIGRKAGLNTPILGREENIKALIKLGLADPGDSDVNAILGGVKIYDELKASGKDVEIATISG DVDVESEKCALRIKEQIDFLLYLYNPDFIYLVSDGKEDEMILKYLESKNIFVWKKRVIVKQSETLESTYYLIQEFIKKTM EEYIPLILTFIGFSLILYAIFADIGWRIVVGIIGLYILSEGVGVRKLLMEKIKKKEEFDVGRVFPISASISIFILIIGLI YSLSSINKTSSTLTEFIGEFLLHFVDSLTLSLLILMVGKFVDTIINSEKDLLEILKKYFFCLICIFISRELIISGGEYLL KKISFIMFVMCVIIYISIVIILSVILFTKSSKEDKFKKLKNSITKG >Mature_366_residues MEKEGVKNYLVLVVDIDDDIGRKAGLNTPILGREENIKALIKLGLADPGDSDVNAILGGVKIYDELKASGKDVEIATISG DVDVESEKCALRIKEQIDFLLYLYNPDFIYLVSDGKEDEMILKYLESKNIFVWKKRVIVKQSETLESTYYLIQEFIKKTM EEYIPLILTFIGFSLILYAIFADIGWRIVVGIIGLYILSEGVGVRKLLMEKIKKKEEFDVGRVFPISASISIFILIIGLI YSLSSINKTSSTLTEFIGEFLLHFVDSLTLSLLILMVGKFVDTIINSEKDLLEILKKYFFCLICIFISRELIISGGEYLL KKISFIMFVMCVIIYISIVIILSVILFTKSSKEDKFKKLKNSITKG
Specific function: Unknown
COG id: COG2237
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To A.fulgidus AF2058
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1032_METJA (Q58438)
Other databases:
- EMBL: L77117 - PIR: G64428 - RefSeq: NP_248026.1 - ProteinModelPortal: Q58438 - GeneID: 1451929 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1032 - NMPDR: fig|243232.1.peg.1063 - TIGR: MJ1032 - HOGENOM: HBG541070 - OMA: DIGWRIV - ProtClustDB: CLSK876433 - BioCyc: MJAN243232:MJ_1032-MONOMER - InterPro: IPR007254
Pfam domain/function: PF04123 DUF373
EC number: NA
Molecular weight: Translated: 41471; Mature: 41471
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xde8d060)-; HASH(0xdfdd8d8)-; HASH(0xdea770c)-; HASH(0xdce3058)-; HASH(0xcfcdba4)-; HASH(0xdbc4b44)-;
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKEGVKNYLVLVVDIDDDIGRKAGLNTPILGREENIKALIKLGLADPGDSDVNAILGGV CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHH KIYDELKASGKDVEIATISGDVDVESEKCALRIKEQIDFLLYLYNPDFIYLVSDGKEDEM HHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCEEEEEECCCEEEEECCCCCHHH ILKYLESKNIFVWKKRVIVKQSETLESTYYLIQEFIKKTMEEYIPLILTFIGFSLILYAI HHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FADIGWRIVVGIIGLYILSEGVGVRKLLMEKIKKKEEFDVGRVFPISASISIFILIIGLI HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHH YSLSSINKTSSTLTEFIGEFLLHFVDSLTLSLLILMVGKFVDTIINSEKDLLEILKKYFF HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH CLICIFISRELIISGGEYLLKKISFIMFVMCVIIYISIVIILSVILFTKSSKEDKFKKLK HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH NSITKG HHHCCH >Mature Secondary Structure MEKEGVKNYLVLVVDIDDDIGRKAGLNTPILGREENIKALIKLGLADPGDSDVNAILGGV CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHH KIYDELKASGKDVEIATISGDVDVESEKCALRIKEQIDFLLYLYNPDFIYLVSDGKEDEM HHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCEEEEEECCCEEEEECCCCCHHH ILKYLESKNIFVWKKRVIVKQSETLESTYYLIQEFIKKTMEEYIPLILTFIGFSLILYAI HHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FADIGWRIVVGIIGLYILSEGVGVRKLLMEKIKKKEEFDVGRVFPISASISIFILIIGLI HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHH YSLSSINKTSSTLTEFIGEFLLHFVDSLTLSLLILMVGKFVDTIINSEKDLLEILKKYFF HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH CLICIFISRELIISGGEYLLKKISFIMFVMCVIIYISIVIILSVILFTKSSKEDKFKKLK HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH NSITKG HHHCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087